Wall clock time and date at job start Tue Mar 31 2020 06:22:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35710 * 116.99640 * 2 1 4 4 N 1.32252 * 119.63922 * 0.02562 * 3 2 1 5 5 C 1.31979 * 121.95184 * 179.97438 * 4 3 2 6 6 C 1.37877 * 120.98875 * 359.97156 * 5 4 3 7 7 C 1.39897 * 119.15326 * 0.02562 * 6 5 4 8 8 C 1.48362 * 120.87944 * 179.97438 * 7 6 5 9 9 C 1.39856 * 119.60581 * 356.06763 * 8 7 6 10 10 C 1.38714 * 119.46401 * 180.02562 * 9 8 7 11 11 C 1.38270 * 118.68480 * 359.73797 * 10 9 8 12 12 C 1.40697 * 119.18154 * 0.52848 * 11 10 9 13 13 C 1.41396 * 119.77265 * 179.74443 * 12 11 10 14 14 H 1.07997 * 120.00182 * 206.76668 * 13 12 11 15 15 C 1.40024 * 119.99524 * 26.76538 * 13 12 11 16 16 N 1.30740 * 119.99629 * 197.16443 * 15 13 12 17 17 Si 1.86801 * 120.00131 * 16.89205 * 15 13 12 18 18 H 1.48508 * 109.46895 * 265.11219 * 17 15 13 19 19 H 1.48496 * 109.47141 * 25.10752 * 17 15 13 20 20 H 1.48493 * 109.47170 * 145.11364 * 17 15 13 21 21 N 1.32205 * 119.60305 * 176.09486 * 8 7 6 22 22 C 1.38854 * 119.63370 * 180.23871 * 3 2 1 23 23 Cl 1.73597 * 120.52949 * 0.04659 * 22 3 2 24 24 H 1.09000 * 109.47473 * 59.99644 * 1 2 3 25 25 H 1.09000 * 109.47420 * 179.97438 * 1 2 3 26 26 H 1.09002 * 109.47419 * 299.99670 * 1 2 3 27 27 H 1.08009 * 119.50580 * 179.97438 * 5 4 3 28 28 H 1.07994 * 120.42350 * 180.02562 * 6 5 4 29 29 H 1.07997 * 120.26899 * 0.02562 * 9 8 7 30 30 H 1.08003 * 120.66322 * 180.02562 * 10 9 8 31 31 H 1.08006 * 120.41112 * 180.27452 * 11 10 9 32 32 H 0.96997 * 119.99928 * 179.72813 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2092 0.0000 4 7 1.3177 2.3138 0.0005 5 6 1.8688 3.5130 0.0010 6 6 3.2393 3.6644 0.0017 7 6 4.0508 2.5249 0.0012 8 6 5.5297 2.6433 0.0013 9 6 6.1216 3.9077 -0.0816 10 6 7.5046 4.0150 -0.0818 11 6 8.2598 2.8602 0.0060 12 6 7.6058 1.6168 0.0812 13 6 8.3659 0.4275 0.1659 14 1 7.9560 -0.5025 -0.1992 15 6 9.6501 0.4558 0.7232 16 7 10.4781 -0.5329 0.5079 17 14 10.1831 1.9097 1.7681 18 1 10.9118 2.8876 0.9207 19 1 8.9858 2.5610 2.3575 20 1 11.0754 1.4363 2.8566 21 7 6.2722 1.5523 0.0791 22 6 3.4321 1.2731 -0.0050 23 17 4.3818 -0.1800 -0.0125 24 1 -0.3634 0.5139 -0.8899 25 1 -0.3634 -1.0276 -0.0005 26 1 -0.3634 0.5138 0.8900 27 1 1.2369 4.3889 0.0010 28 1 3.6806 4.6501 0.0025 29 1 5.5069 4.7935 -0.1449 30 1 7.9820 4.9818 -0.1446 31 1 9.3387 2.9116 0.0126 32 1 11.3690 -0.5115 0.8907 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001243316261.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:22:22 Heat of formation + Delta-G solvation = 33.411586 kcal Electronic energy + Delta-G solvation = -19919.705963 eV Core-core repulsion = 16678.927381 eV Total energy + Delta-G solvation = -3240.778582 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 290.056 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -40.48834 -38.77913 -37.62544 -35.77233 -34.09288 -32.74554 -31.34226 -30.40422 -29.84559 -27.21539 -25.97782 -23.81923 -23.22714 -21.22989 -21.06610 -18.45841 -17.29005 -16.86432 -16.32734 -15.98353 -15.78304 -15.10244 -14.60140 -14.43671 -14.02470 -13.77747 -13.70264 -12.94013 -12.67482 -12.45333 -12.27932 -11.85631 -11.69980 -11.40041 -11.29889 -11.16199 -10.88114 -10.54488 -10.21536 -10.02008 -9.64782 -9.58583 -9.31693 -8.62592 -8.17011 -7.82796 -7.66129 -7.09313 -4.72136 0.93582 1.23270 2.41490 2.60775 2.79051 2.98314 3.10434 3.12578 3.19441 3.82174 3.85590 4.39396 4.41623 4.68438 5.03717 5.18285 5.28485 5.30736 5.41209 5.44431 5.59376 5.75249 5.81442 6.04957 6.13858 6.25054 6.38903 6.52154 6.74183 6.96545 7.23634 7.26764 7.33223 7.61347 7.85102 8.20268 8.32958 8.57465 9.44893 9.91981 Molecular weight = 290.06amu Principal moments of inertia in cm(-1) A = 0.024725 B = 0.005294 C = 0.004494 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1132.202278 B = 5287.915541 C = 6229.311982 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.042 3.958 2 O -0.298 6.298 3 C 0.319 3.681 4 N -0.536 5.536 5 C 0.128 3.872 6 C -0.188 4.188 7 C 0.059 3.941 8 C 0.171 3.829 9 C -0.276 4.276 10 C -0.048 4.048 11 C -0.272 4.272 12 C 0.252 3.748 13 C -0.409 4.409 14 H 0.100 0.900 15 C 0.086 3.914 16 N -0.792 5.792 17 Si 0.915 3.085 18 H -0.269 1.269 19 H -0.246 1.246 20 H -0.288 1.288 21 N -0.503 5.503 22 C -0.087 4.087 23 Cl 0.005 6.995 24 H 0.057 0.943 25 H 0.094 0.906 26 H 0.057 0.943 27 H 0.163 0.837 28 H 0.147 0.853 29 H 0.109 0.891 30 H 0.108 0.892 31 H 0.110 0.890 32 H 0.290 0.710 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.561 6.291 0.131 14.050 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.054 4.054 2 O -0.204 6.204 3 C 0.139 3.861 4 N -0.261 5.261 5 C -0.027 4.027 6 C -0.209 4.209 7 C 0.050 3.950 8 C 0.028 3.972 9 C -0.300 4.300 10 C -0.072 4.072 11 C -0.294 4.294 12 C 0.127 3.873 13 C -0.440 4.440 14 H 0.118 0.882 15 C -0.136 4.136 16 N -0.416 5.416 17 Si 0.742 3.258 18 H -0.195 1.195 19 H -0.169 1.169 20 H -0.216 1.216 21 N -0.216 5.216 22 C -0.118 4.118 23 Cl 0.035 6.965 24 H 0.076 0.924 25 H 0.113 0.887 26 H 0.076 0.924 27 H 0.180 0.820 28 H 0.164 0.836 29 H 0.126 0.874 30 H 0.126 0.874 31 H 0.127 0.873 32 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -13.374 4.750 0.196 14.193 hybrid contribution 1.562 1.579 0.370 2.252 sum -11.812 6.329 0.566 13.412 Atomic orbital electron populations 1.22831 0.77521 1.02787 1.02222 1.86332 1.22523 1.23830 1.87745 1.19423 0.87658 0.85282 0.93689 1.67291 1.40014 0.98565 1.20213 1.22248 0.92619 0.93433 0.94361 1.22088 0.93933 0.99311 1.05585 1.18947 0.93094 0.90335 0.92618 1.19218 0.89909 0.90561 0.97537 1.21161 0.94853 0.96320 1.17624 1.20878 0.93518 0.97223 0.95600 1.21984 0.99381 0.94340 1.13732 1.18590 0.87766 0.92202 0.88749 1.19244 0.96290 0.95743 1.32757 0.88217 1.26134 0.95112 0.97283 0.95079 1.69606 1.06484 1.31334 1.34198 0.86282 0.79594 0.80548 0.79348 1.19518 1.16928 1.21594 1.68698 1.06327 1.28596 1.17994 1.21084 0.89103 0.91615 1.09951 1.98430 1.70151 1.31946 1.95991 0.92441 0.88718 0.92428 0.82008 0.83580 0.87351 0.87414 0.87267 0.89975 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.46 10.38 101.05 1.05 1.51 16 2 O -0.30 -4.69 9.95 -18.83 -0.19 -4.88 16 3 C 0.32 5.44 7.48 -17.14 -0.13 5.31 16 4 N -0.54 -8.07 9.19 -13.37 -0.12 -8.20 16 5 C 0.13 1.65 11.16 -17.62 -0.20 1.46 16 6 C -0.19 -2.73 9.48 -39.09 -0.37 -3.10 16 7 C 0.06 1.11 5.91 -104.59 -0.62 0.49 16 8 C 0.17 3.71 6.73 -82.93 -0.56 3.15 16 9 C -0.28 -5.42 9.49 -38.80 -0.37 -5.79 16 10 C -0.05 -0.98 10.15 -39.39 -0.40 -1.38 16 11 C -0.27 -6.35 7.09 -38.64 -0.27 -6.62 16 12 C 0.25 6.47 6.04 -85.01 -0.51 5.95 16 13 C -0.41 -11.05 9.82 -37.71 -0.37 -11.42 16 14 H 0.10 2.88 8.06 -52.49 -0.42 2.46 16 15 C 0.09 2.19 5.43 -17.35 -0.09 2.09 16 16 N -0.79 -20.42 13.92 55.55 0.77 -19.65 16 17 Si 0.92 20.11 24.38 -169.99 -4.14 15.96 16 18 H -0.27 -5.62 6.67 56.52 0.38 -5.25 16 19 H -0.25 -5.61 6.70 56.52 0.38 -5.23 16 20 H -0.29 -6.10 7.11 56.52 0.40 -5.70 16 21 N -0.50 -12.38 6.98 -7.67 -0.05 -12.44 16 22 C -0.09 -1.66 6.39 -38.83 -0.25 -1.91 16 23 Cl 0.01 0.11 25.44 -51.86 -1.32 -1.21 16 24 H 0.06 0.61 8.10 -51.93 -0.42 0.19 16 25 H 0.09 0.80 8.14 -51.93 -0.42 0.37 16 26 H 0.06 0.61 8.10 -51.93 -0.42 0.19 16 27 H 0.16 1.42 8.06 -52.48 -0.42 1.00 16 28 H 0.15 1.75 6.32 -52.49 -0.33 1.42 16 29 H 0.11 1.73 6.28 -52.49 -0.33 1.40 16 30 H 0.11 1.82 8.06 -52.48 -0.42 1.40 16 31 H 0.11 2.50 4.17 -52.48 -0.22 2.28 16 32 H 0.29 6.69 8.29 -40.82 -0.34 6.35 16 LS Contribution 289.47 15.07 4.36 4.36 Total: -1.00 -29.04 289.47 -6.38 -35.42 By element: Atomic # 1 Polarization: 3.47 SS G_CDS: -2.59 Total: 0.88 kcal Atomic # 6 Polarization: -7.16 SS G_CDS: -3.09 Total: -10.25 kcal Atomic # 7 Polarization: -40.88 SS G_CDS: 0.60 Total: -40.28 kcal Atomic # 8 Polarization: -4.69 SS G_CDS: -0.19 Total: -4.88 kcal Atomic # 14 Polarization: 20.11 SS G_CDS: -4.14 Total: 15.96 kcal Atomic # 17 Polarization: 0.11 SS G_CDS: -1.32 Total: -1.21 kcal Total LS contribution 4.36 Total: 4.36 kcal Total: -29.04 -6.38 -35.42 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001243316261.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.829 kcal (2) G-P(sol) polarization free energy of solvation -29.039 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 39.790 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.378 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.417 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.412 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds