Wall clock time and date at job start Tue Mar 31 2020 06:23:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.35522 * 116.99889 * 2 1 4 4 C 1.39104 * 120.48527 * 0.02562 * 3 2 1 5 5 C 1.38344 * 118.62958 * 179.97438 * 4 3 2 6 6 C 1.40043 * 119.57457 * 0.02562 * 5 4 3 7 7 C 1.48269 * 119.51632 * 179.97438 * 6 5 4 8 8 C 1.39827 * 120.91673 * 311.61487 * 7 6 5 9 9 C 1.37971 * 119.03289 * 180.29584 * 8 7 6 10 10 N 1.31928 * 120.91604 * 359.73048 * 9 8 7 11 11 C 1.31879 * 122.03678 * 359.97438 * 10 9 8 12 12 C 1.38167 * 120.86654 * 0.02562 * 11 10 9 13 13 Cl 1.73596 * 120.50938 * 179.97438 * 12 11 10 14 14 N 1.32173 * 120.96832 * 0.26997 * 6 5 4 15 15 C 1.33542 * 121.46633 * 359.44725 * 14 6 5 16 16 C 1.41023 * 119.83294 * 180.26573 * 15 14 6 17 17 H 1.07999 * 119.99746 * 185.53721 * 16 15 14 18 18 C 1.40039 * 120.00173 * 5.52981 * 16 15 14 19 19 N 1.30769 * 119.99795 * 5.41577 * 18 16 15 20 20 Si 1.86795 * 119.99997 * 185.42081 * 18 16 15 21 21 H 1.48501 * 109.47383 * 59.99928 * 20 18 16 22 22 H 1.48500 * 109.47243 * 179.97438 * 20 18 16 23 23 H 1.48498 * 109.47151 * 299.99974 * 20 18 16 24 24 H 1.09004 * 109.47382 * 180.02562 * 1 2 3 25 25 H 1.09006 * 109.47171 * 299.99910 * 1 2 3 26 26 H 1.09000 * 109.47711 * 59.99770 * 1 2 3 27 27 H 1.07997 * 120.68235 * 359.95585 * 4 3 2 28 28 H 1.08002 * 120.21364 * 179.97438 * 5 4 3 29 29 H 1.08003 * 120.48457 * 0.02562 * 8 7 6 30 30 H 1.07999 * 119.54168 * 179.70620 * 9 8 7 31 31 H 1.08005 * 119.56680 * 180.02562 * 11 10 9 32 32 H 0.96999 * 120.00043 * 179.97438 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0442 1.2075 0.0000 4 6 1.2964 2.3805 0.0005 5 6 1.9641 3.5922 0.0011 6 6 3.3644 3.6098 0.0005 7 6 4.0786 4.9091 0.0005 8 6 3.7261 5.9226 -0.8960 9 6 4.4209 7.1143 -0.8663 10 7 5.4013 7.3060 -0.0046 11 6 5.7623 6.3796 0.8618 12 6 5.1201 5.1569 0.9010 13 17 5.6034 3.9439 2.0449 14 7 4.0587 2.4851 -0.0059 15 6 3.4557 1.2936 -0.0010 16 6 4.2304 0.1152 -0.0024 17 1 3.7488 -0.8475 -0.0887 18 6 5.6243 0.1935 0.1080 19 7 6.1996 1.3488 0.3186 20 14 6.6616 -1.3523 -0.0457 21 1 6.4413 -1.9657 -1.3801 22 1 8.0967 -1.0026 0.1069 23 1 6.2715 -2.3176 1.0132 24 1 -0.3634 -1.0277 0.0005 25 1 -0.3634 0.5138 0.8900 26 1 -0.3634 0.5138 -0.8899 27 1 0.2170 2.3460 0.0002 28 1 1.4089 4.5186 0.0011 29 1 2.9247 5.7733 -1.6044 30 1 4.1586 7.9010 -1.5582 31 1 6.5706 6.5794 1.5498 32 1 7.1650 1.4030 0.3954 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001243385163.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:23:40 Heat of formation + Delta-G solvation = 28.144571 kcal Electronic energy + Delta-G solvation = -20245.768645 eV Core-core repulsion = 17004.761668 eV Total energy + Delta-G solvation = -3241.006977 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 290.056 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -39.78089 -38.84705 -36.78083 -35.67621 -33.89031 -32.30634 -30.71556 -30.38902 -29.11821 -26.67205 -25.74984 -23.43379 -22.95740 -21.44734 -20.55415 -17.67941 -16.81134 -16.72342 -16.07254 -15.59649 -15.32588 -14.81752 -14.78166 -13.91790 -13.77302 -13.57184 -13.12157 -12.85362 -12.56238 -12.33302 -11.62787 -11.55308 -11.33084 -11.21077 -11.15236 -10.73774 -10.52906 -10.47378 -10.22909 -9.95657 -9.47987 -9.18362 -9.13639 -8.40030 -8.22968 -7.78928 -7.17500 -6.48030 -4.43882 1.38133 1.41579 2.65335 2.83696 2.89517 3.09050 3.11471 3.15989 3.94636 4.09247 4.33326 4.65393 4.73762 5.01615 5.16506 5.37157 5.63785 5.64189 5.69532 5.77980 5.84826 5.95442 5.97334 6.14023 6.19194 6.44689 6.65085 6.76785 6.86842 7.13089 7.27817 7.41146 7.73338 8.12008 8.18569 8.22693 8.64424 8.91330 9.88431 10.25489 Molecular weight = 290.06amu Principal moments of inertia in cm(-1) A = 0.013719 B = 0.007477 C = 0.005311 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2040.529455 B = 3743.975315 C = 5270.655758 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.308 6.308 3 C -0.022 4.022 4 C -0.148 4.148 5 C -0.265 4.265 6 C 0.138 3.862 7 C 0.048 3.952 8 C -0.154 4.154 9 C 0.086 3.914 10 N -0.485 5.485 11 C 0.096 3.904 12 C -0.061 4.061 13 Cl -0.017 7.017 14 N -0.433 5.433 15 C 0.252 3.748 16 C -0.409 4.409 17 H 0.090 0.910 18 C 0.067 3.933 19 N -0.699 5.699 20 Si 0.906 3.094 21 H -0.265 1.265 22 H -0.278 1.278 23 H -0.265 1.265 24 H 0.083 0.917 25 H 0.040 0.960 26 H 0.040 0.960 27 H 0.105 0.895 28 H 0.097 0.903 29 H 0.138 0.862 30 H 0.155 0.845 31 H 0.157 0.843 32 H 0.274 0.726 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.320 4.595 0.045 5.669 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 O -0.221 6.221 3 C -0.071 4.071 4 C -0.172 4.172 5 C -0.289 4.289 6 C -0.004 4.004 7 C 0.038 3.962 8 C -0.175 4.175 9 C -0.071 4.071 10 N -0.195 5.195 11 C -0.062 4.062 12 C -0.091 4.091 13 Cl 0.012 6.988 14 N -0.147 5.147 15 C 0.125 3.875 16 C -0.440 4.440 17 H 0.108 0.892 18 C -0.159 4.159 19 N -0.319 5.319 20 Si 0.730 3.270 21 H -0.190 1.190 22 H -0.203 1.203 23 H -0.190 1.190 24 H 0.102 0.898 25 H 0.059 0.941 26 H 0.059 0.941 27 H 0.123 0.877 28 H 0.115 0.885 29 H 0.156 0.844 30 H 0.173 0.827 31 H 0.175 0.825 32 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -1.629 5.184 0.181 5.437 hybrid contribution -1.277 -1.377 -0.014 1.878 sum -2.906 3.807 0.167 4.792 Atomic orbital electron populations 1.22770 0.81593 1.01977 0.99980 1.85943 1.18407 1.27818 1.89912 1.20385 0.93725 0.83239 1.09798 1.20829 0.97795 0.92473 1.06079 1.20826 0.93456 0.96359 1.18302 1.19318 0.89416 0.91399 1.00267 1.19083 0.91928 0.93266 0.91877 1.22213 1.01878 0.93610 0.99821 1.22562 0.91973 0.96139 0.96386 1.67635 1.14860 1.32251 1.04707 1.22591 0.98628 0.87985 0.96955 1.22266 0.97806 0.92520 0.96523 1.98421 1.90134 1.53550 1.56645 1.68962 1.34357 0.94964 1.16420 1.18092 0.84938 0.91933 0.92547 1.19479 0.90890 0.92997 1.40603 0.89165 1.26042 0.98685 0.97172 0.94033 1.70121 1.11112 1.24364 1.26321 0.86406 0.78525 0.82108 0.79962 1.18954 1.20276 1.19004 0.89802 0.94119 0.94134 0.87675 0.88461 0.84387 0.82739 0.82540 0.91433 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.53 9.83 101.05 0.99 1.52 16 2 O -0.31 -6.80 9.61 -18.26 -0.18 -6.98 16 3 C -0.02 -0.54 6.74 -38.05 -0.26 -0.79 16 4 C -0.15 -3.20 9.11 -39.22 -0.36 -3.56 16 5 C -0.27 -5.74 9.55 -38.87 -0.37 -6.11 16 6 C 0.14 3.22 5.92 -82.92 -0.49 2.73 16 7 C 0.05 0.98 5.63 -104.56 -0.59 0.39 16 8 C -0.15 -2.60 9.58 -39.09 -0.37 -2.97 16 9 C 0.09 1.30 11.17 -17.61 -0.20 1.10 16 10 N -0.48 -8.08 10.34 -13.30 -0.14 -8.22 16 11 C 0.10 1.64 10.98 -17.56 -0.19 1.44 16 12 C -0.06 -1.20 6.36 -38.99 -0.25 -1.45 16 13 Cl -0.02 -0.35 26.55 -51.86 -1.38 -1.72 16 14 N -0.43 -11.21 6.56 -7.57 -0.05 -11.26 16 15 C 0.25 6.68 6.55 -84.86 -0.56 6.13 16 16 C -0.41 -10.70 8.93 -37.85 -0.34 -11.04 16 17 H 0.09 2.31 7.33 -52.49 -0.38 1.92 16 18 C 0.07 1.65 5.48 -17.33 -0.09 1.56 16 19 N -0.70 -17.53 10.86 55.55 0.60 -16.93 16 20 Si 0.91 18.44 29.56 -169.99 -5.03 13.41 16 21 H -0.26 -5.38 7.11 56.52 0.40 -4.98 16 22 H -0.28 -5.52 7.11 56.52 0.40 -5.12 16 23 H -0.27 -5.36 7.11 56.52 0.40 -4.96 16 24 H 0.08 1.09 8.14 -51.93 -0.42 0.67 16 25 H 0.04 0.61 7.69 -51.93 -0.40 0.21 16 26 H 0.04 0.60 7.69 -51.93 -0.40 0.20 16 27 H 0.11 1.94 6.43 -52.49 -0.34 1.61 16 28 H 0.10 1.85 8.02 -52.49 -0.42 1.43 16 29 H 0.14 2.05 8.05 -52.48 -0.42 1.63 16 30 H 0.16 1.75 8.06 -52.49 -0.42 1.32 16 31 H 0.16 2.26 8.06 -52.48 -0.42 1.84 16 32 H 0.27 6.41 8.29 -40.82 -0.34 6.07 16 LS Contribution 298.39 15.07 4.50 4.50 Total: -1.00 -28.91 298.39 -7.50 -36.42 By element: Atomic # 1 Polarization: 4.60 SS G_CDS: -2.77 Total: 1.83 kcal Atomic # 6 Polarization: -7.98 SS G_CDS: -3.07 Total: -11.05 kcal Atomic # 7 Polarization: -36.82 SS G_CDS: 0.42 Total: -36.41 kcal Atomic # 8 Polarization: -6.80 SS G_CDS: -0.18 Total: -6.98 kcal Atomic # 14 Polarization: 18.44 SS G_CDS: -5.03 Total: 13.41 kcal Atomic # 17 Polarization: -0.35 SS G_CDS: -1.38 Total: -1.72 kcal Total LS contribution 4.50 Total: 4.50 kcal Total: -28.91 -7.50 -36.42 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001243385163.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.561 kcal (2) G-P(sol) polarization free energy of solvation -28.913 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.648 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.503 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.416 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.145 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds