Wall clock time and date at job start Tue Mar 31 2020 06:22:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35703 * 117.00000 * 2 1 4 4 C 1.38727 * 119.61596 * 179.97438 * 3 2 1 5 5 C 1.39520 * 118.98276 * 179.97438 * 4 3 2 6 6 C 1.48359 * 120.88255 * 179.97438 * 5 4 3 7 7 C 1.39858 * 119.60220 * 47.90843 * 6 5 4 8 8 C 1.38726 * 119.46202 * 180.02562 * 7 6 5 9 9 C 1.38273 * 118.68503 * 0.02562 * 8 7 6 10 10 C 1.40699 * 119.17825 * 359.97438 * 9 8 7 11 11 C 1.41391 * 119.76426 * 179.97438 * 10 9 8 12 12 H 1.07999 * 120.00344 * 359.97438 * 11 10 9 13 13 C 1.40030 * 120.00111 * 180.02562 * 11 10 9 14 14 N 1.30745 * 119.99499 * 359.97438 * 13 11 10 15 15 Si 1.86797 * 119.99967 * 179.97438 * 13 11 10 16 16 H 1.48505 * 109.47118 * 89.99742 * 15 13 11 17 17 H 1.48502 * 109.46773 * 209.99574 * 15 13 11 18 18 H 1.48492 * 109.47212 * 329.99706 * 15 13 11 19 19 N 1.32208 * 119.60642 * 227.63898 * 6 5 4 20 20 C 1.40015 * 118.23539 * 359.75783 * 5 4 3 21 21 Cl 1.73602 * 120.43996 * 180.23890 * 20 5 4 22 22 C 1.37994 * 119.11853 * 0.50684 * 20 5 4 23 23 N 1.31984 * 120.93345 * 359.47924 * 22 20 5 24 24 H 1.08998 * 109.47263 * 299.99855 * 1 2 3 25 25 H 1.09006 * 109.47385 * 59.99963 * 1 2 3 26 26 H 1.09001 * 109.46867 * 179.97438 * 1 2 3 27 27 H 1.08001 * 120.50396 * 359.97438 * 4 3 2 28 28 H 1.07994 * 120.27210 * 0.02562 * 7 6 5 29 29 H 1.07996 * 120.65875 * 180.02562 * 8 7 6 30 30 H 1.07995 * 120.41089 * 180.02562 * 9 8 7 31 31 H 0.96996 * 119.99689 * 180.02562 * 14 13 11 32 32 H 1.07999 * 119.53114 * 179.75311 * 22 20 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0451 1.2091 0.0000 4 6 3.4309 1.2724 0.0005 5 6 4.0505 2.5225 0.0000 6 6 5.5295 2.6393 0.0011 7 6 6.2832 1.8803 -0.9000 8 6 7.6660 1.9914 -0.8961 9 6 8.2599 2.8551 0.0057 10 6 7.4473 3.5916 0.8872 11 6 8.0416 4.4780 1.8148 12 1 9.1156 4.5875 1.8453 13 6 7.2377 5.2131 2.6947 14 7 5.9375 5.0801 2.6580 15 14 8.0229 6.3835 3.9206 16 1 8.1515 7.7298 3.3072 17 1 7.1726 6.4719 5.1349 18 1 9.3686 5.8792 4.2943 19 7 6.1190 3.4636 0.8502 20 6 3.2395 3.6638 -0.0063 21 17 3.9501 5.2477 -0.0136 22 6 1.8679 3.5129 -0.0010 23 7 1.3173 2.3134 -0.0005 24 1 -0.3634 0.5138 0.8900 25 1 -0.3634 0.5139 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 4.0210 0.3679 0.0014 28 1 5.7927 1.2132 -1.5933 29 1 8.2667 1.4148 -1.5838 30 1 9.3340 2.9636 0.0326 31 1 5.3806 5.5896 3.2673 32 1 1.2360 4.3888 -0.0018 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001245037299.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:22:59 Heat of formation + Delta-G solvation = 27.433855 kcal Electronic energy + Delta-G solvation = -20014.420608 eV Core-core repulsion = 16773.382811 eV Total energy + Delta-G solvation = -3241.037796 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 290.056 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -40.33495 -38.39499 -37.48326 -35.59904 -33.87130 -32.64821 -30.67296 -30.13851 -29.35475 -27.13867 -25.70267 -23.74199 -22.91742 -21.31671 -20.65799 -18.04964 -17.27810 -16.88212 -15.96358 -15.85311 -15.29769 -14.65299 -14.39671 -14.37905 -14.02162 -13.63230 -13.37765 -12.69205 -12.46371 -12.18856 -11.89322 -11.68127 -11.56408 -11.22535 -11.10059 -10.81519 -10.59869 -10.54229 -10.32690 -10.04473 -9.56620 -9.37051 -9.27392 -8.23975 -7.99832 -7.67973 -7.56361 -6.43164 -4.55813 1.32283 1.39534 2.67179 2.83463 2.93501 3.07990 3.09943 3.15604 3.30071 3.92623 4.00479 4.49246 4.68963 4.99838 5.23898 5.31445 5.34782 5.35536 5.62681 5.76533 5.90461 5.98329 6.03803 6.34051 6.43059 6.49366 6.67282 6.83071 7.02076 7.21690 7.36908 7.46074 7.62925 7.91673 8.00040 8.14724 8.59672 8.84474 9.94228 10.26596 Molecular weight = 290.06amu Principal moments of inertia in cm(-1) A = 0.018988 B = 0.005601 C = 0.004896 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1474.235110 B = 4997.563847 C = 5717.306004 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.042 3.958 2 O -0.309 6.309 3 C 0.310 3.690 4 C -0.168 4.168 5 C 0.080 3.920 6 C 0.163 3.837 7 C -0.293 4.293 8 C -0.059 4.059 9 C -0.266 4.266 10 C 0.254 3.746 11 C -0.427 4.427 12 H 0.084 0.916 13 C 0.069 3.931 14 N -0.699 5.699 15 Si 0.903 3.097 16 H -0.270 1.270 17 H -0.276 1.276 18 H -0.262 1.262 19 N -0.444 5.444 20 C -0.092 4.092 21 Cl -0.020 7.020 22 C 0.136 3.864 23 N -0.537 5.537 24 H 0.057 0.943 25 H 0.056 0.944 26 H 0.092 0.908 27 H 0.146 0.854 28 H 0.096 0.904 29 H 0.099 0.901 30 H 0.100 0.900 31 H 0.273 0.727 32 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.811 -3.244 -3.341 9.094 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.054 4.054 2 O -0.216 6.216 3 C 0.132 3.868 4 C -0.190 4.190 5 C 0.070 3.930 6 C 0.018 3.982 7 C -0.317 4.317 8 C -0.083 4.083 9 C -0.289 4.289 10 C 0.129 3.871 11 C -0.457 4.457 12 H 0.102 0.898 13 C -0.157 4.157 14 N -0.319 5.319 15 Si 0.727 3.273 16 H -0.195 1.195 17 H -0.201 1.201 18 H -0.186 1.186 19 N -0.156 5.156 20 C -0.122 4.122 21 Cl 0.009 6.991 22 C -0.020 4.020 23 N -0.261 5.261 24 H 0.076 0.924 25 H 0.075 0.925 26 H 0.110 0.890 27 H 0.164 0.836 28 H 0.115 0.885 29 H 0.117 0.883 30 H 0.118 0.882 31 H 0.084 0.916 32 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -9.212 -2.849 -2.623 9.993 hybrid contribution 1.536 0.297 -0.035 1.565 sum -7.676 -2.552 -2.659 8.515 Atomic orbital electron populations 1.22797 0.77731 1.02495 1.02328 1.86229 1.22485 1.24568 1.88338 1.19599 0.89067 0.84501 0.93668 1.21037 0.91456 0.98596 1.07925 1.18866 0.93434 0.90226 0.90425 1.19324 0.89666 0.94726 0.94492 1.21080 0.94263 1.09171 1.07181 1.20759 0.93975 0.96718 0.96857 1.21825 0.99089 1.05062 1.02933 1.18500 0.87119 0.90758 0.90750 1.19587 0.94453 1.18474 1.13223 0.89814 1.26029 0.94786 0.97156 0.97778 1.70136 1.04149 1.29443 1.28162 0.86398 0.80234 0.80728 0.79940 1.19496 1.20142 1.18632 1.68851 1.10793 1.15904 1.20081 1.21946 0.93374 0.89354 1.07529 1.98402 1.83677 1.20644 1.96416 1.22154 0.90764 0.93906 0.95169 1.67241 1.40207 0.98295 1.20395 0.92441 0.92493 0.88982 0.83608 0.88545 0.88280 0.88164 0.91592 0.82014 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.47 10.38 101.05 1.05 1.52 16 2 O -0.31 -4.70 10.47 -18.81 -0.20 -4.89 16 3 C 0.31 5.34 7.48 -17.19 -0.13 5.21 16 4 C -0.17 -3.12 9.50 -38.92 -0.37 -3.48 16 5 C 0.08 1.66 5.63 -104.59 -0.59 1.07 16 6 C 0.16 3.85 5.94 -82.93 -0.49 3.35 16 7 C -0.29 -6.43 9.56 -38.80 -0.37 -6.80 16 8 C -0.06 -1.28 10.15 -39.39 -0.40 -1.68 16 9 C -0.27 -6.29 9.83 -38.64 -0.38 -6.67 16 10 C 0.25 6.65 6.55 -85.01 -0.56 6.10 16 11 C -0.43 -10.96 9.14 -37.71 -0.34 -11.30 16 12 H 0.08 2.02 7.85 -52.49 -0.41 1.61 16 13 C 0.07 1.69 5.50 -17.34 -0.10 1.59 16 14 N -0.70 -17.62 11.46 55.55 0.64 -16.98 16 15 Si 0.90 18.17 29.56 -169.99 -5.02 13.14 16 16 H -0.27 -5.40 7.11 56.52 0.40 -5.00 16 17 H -0.28 -5.50 7.11 56.52 0.40 -5.09 16 18 H -0.26 -5.22 7.11 56.52 0.40 -4.82 16 19 N -0.44 -11.54 6.44 -7.67 -0.05 -11.59 16 20 C -0.09 -1.80 6.35 -39.01 -0.25 -2.04 16 21 Cl -0.02 -0.42 27.15 -51.86 -1.41 -1.83 16 22 C 0.14 2.28 10.97 -17.58 -0.19 2.08 16 23 N -0.54 -9.05 9.19 -13.38 -0.12 -9.17 16 24 H 0.06 0.64 8.10 -51.93 -0.42 0.22 16 25 H 0.06 0.62 8.10 -51.93 -0.42 0.20 16 26 H 0.09 0.75 8.14 -51.93 -0.42 0.33 16 27 H 0.15 2.51 8.04 -52.49 -0.42 2.09 16 28 H 0.10 1.89 8.01 -52.49 -0.42 1.47 16 29 H 0.10 1.82 8.06 -52.49 -0.42 1.39 16 30 H 0.10 2.18 8.06 -52.49 -0.42 1.76 16 31 H 0.27 6.38 8.29 -40.82 -0.34 6.04 16 32 H 0.16 2.22 8.06 -52.49 -0.42 1.80 16 LS Contribution 303.28 15.07 4.57 4.57 Total: -1.00 -28.17 303.28 -7.64 -35.80 By element: Atomic # 1 Polarization: 4.93 SS G_CDS: -2.92 Total: 2.01 kcal Atomic # 6 Polarization: -7.94 SS G_CDS: -3.12 Total: -11.06 kcal Atomic # 7 Polarization: -38.21 SS G_CDS: 0.46 Total: -37.74 kcal Atomic # 8 Polarization: -4.70 SS G_CDS: -0.20 Total: -4.89 kcal Atomic # 14 Polarization: 18.17 SS G_CDS: -5.02 Total: 13.14 kcal Atomic # 17 Polarization: -0.42 SS G_CDS: -1.41 Total: -1.83 kcal Total LS contribution 4.57 Total: 4.57 kcal Total: -28.17 -7.64 -35.80 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001245037299.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.236 kcal (2) G-P(sol) polarization free energy of solvation -28.167 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.070 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.636 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.802 kcal (6) G-S(sol) free energy of system = (1) + (5) 27.434 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds