Wall clock time and date at job start Tue Mar 31 2020 06:09:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 N 1.31754 * 119.70113 * 2 1 4 4 C 1.31995 * 121.84115 * 180.29233 * 3 2 1 5 5 Cl 1.73596 * 119.49526 * 179.74854 * 4 3 2 6 6 C 1.38498 * 121.00371 * 359.72718 * 4 3 2 7 7 C 1.38322 * 119.28133 * 359.97438 * 6 4 3 8 8 C 1.39330 * 119.69433 * 179.75881 * 2 1 3 9 9 C 1.48277 * 120.52763 * 359.97438 * 8 2 1 10 10 C 1.39438 * 119.64685 * 132.20303 * 9 8 2 11 11 C 1.38223 * 119.14071 * 179.72486 * 10 9 8 12 12 C 1.39429 * 118.45568 * 0.51742 * 11 10 9 13 13 O 1.35713 * 120.38069 * 179.75841 * 12 11 10 14 14 C 1.34806 * 117.00407 * 5.11149 * 13 12 11 15 15 H 1.08001 * 120.00180 * 354.94301 * 14 13 12 16 16 C 1.38656 * 120.00044 * 174.93366 * 14 13 12 17 17 N 1.31560 * 120.00027 * 0.02562 * 16 14 13 18 18 Si 1.86800 * 119.99935 * 179.72929 * 16 14 13 19 19 H 1.48498 * 109.47226 * 270.27493 * 18 16 14 20 20 H 1.48497 * 109.47064 * 30.27908 * 18 16 14 21 21 H 1.48503 * 109.46893 * 150.27975 * 18 16 14 22 22 C 1.38950 * 119.22697 * 359.48272 * 12 11 10 23 23 N 1.31666 * 120.79051 * 0.25171 * 22 12 11 24 24 H 1.09004 * 109.46716 * 264.82835 * 1 2 3 25 25 H 1.08998 * 109.47130 * 24.82816 * 1 2 3 26 26 H 1.09002 * 109.47416 * 144.82902 * 1 2 3 27 27 H 1.08004 * 120.35623 * 180.02562 * 6 4 3 28 28 H 1.08007 * 120.84126 * 179.97438 * 7 6 4 29 29 H 1.07995 * 120.42618 * 0.02742 * 10 9 8 30 30 H 1.07999 * 120.76992 * 180.29348 * 11 10 9 31 31 H 0.96999 * 119.99914 * 359.72618 * 17 16 14 32 32 H 1.08000 * 119.60142 * 180.27440 * 22 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1598 1.1444 0.0000 4 6 3.4788 1.1937 -0.0057 5 17 4.2765 2.7356 -0.0120 6 6 4.2360 0.0341 -0.0064 7 6 3.5958 -1.1920 -0.0004 8 6 2.1972 -1.2103 0.0051 9 6 1.4608 -2.4973 0.0111 10 6 1.8245 -3.5042 -0.8823 11 6 1.1346 -4.7019 -0.8638 12 6 0.0888 -4.8522 0.0460 13 8 -0.6178 -6.0098 0.0943 14 6 -0.1930 -7.0195 -0.6914 15 1 0.6228 -6.8606 -1.3810 16 6 -0.8033 -8.2621 -0.6140 17 7 -1.7972 -8.4557 0.2259 18 14 -0.2195 -9.6591 -1.7081 19 1 -0.9763 -9.6367 -2.9856 20 1 1.2296 -9.4961 -1.9882 21 1 -0.4480 -10.9552 -1.0202 22 6 -0.2176 -3.8051 0.9065 23 7 0.4631 -2.6788 0.8667 24 1 -0.3633 -0.0926 1.0235 25 1 -0.3633 0.9327 -0.4315 26 1 -0.3634 -0.8401 -0.5920 27 1 5.3148 0.0866 -0.0106 28 1 4.1615 -2.1121 -0.0011 29 1 2.6378 -3.3521 -1.5763 30 1 1.3973 -5.5013 -1.5408 31 1 -2.1005 -7.7302 0.7938 32 1 -1.0236 -3.9166 1.6166 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001245773747.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:09:25 Heat of formation + Delta-G solvation = 23.856809 kcal Electronic energy + Delta-G solvation = -19313.140491 eV Core-core repulsion = 16071.947582 eV Total energy + Delta-G solvation = -3241.192909 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 290.056 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -40.57290 -39.54662 -37.53956 -36.70086 -33.21871 -33.05095 -32.35983 -31.52539 -29.07189 -27.44709 -25.40747 -23.85130 -23.00556 -22.14792 -21.40842 -18.75532 -17.53803 -16.96452 -16.73080 -16.05194 -15.88175 -14.77259 -14.33192 -14.28759 -14.11728 -13.88397 -13.75882 -13.23533 -12.93171 -12.85644 -12.65190 -12.37952 -11.94959 -11.62162 -11.46581 -11.37874 -11.07224 -10.81185 -10.47489 -10.07814 -9.96505 -9.71174 -9.24167 -9.18603 -8.97609 -8.72396 -7.56964 -7.07332 -4.34799 0.71019 1.10677 1.71907 1.78119 1.97550 3.09318 3.14548 3.28193 3.55671 3.87099 4.26207 4.32643 4.47641 4.74122 4.77828 4.89108 4.90429 5.11367 5.20564 5.43043 5.56103 5.62708 5.66674 5.81511 5.85075 5.96840 6.12931 6.15675 6.30590 6.47685 6.66468 6.78331 7.13740 7.21954 7.72298 8.06887 8.46915 8.58468 9.21766 10.36066 Molecular weight = 290.06amu Principal moments of inertia in cm(-1) A = 0.042016 B = 0.003071 C = 0.002921 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 666.259834 B = 9115.571338 C = 9584.920223 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.092 4.092 2 C 0.168 3.832 3 N -0.480 5.480 4 C 0.168 3.832 5 Cl -0.043 7.043 6 C -0.160 4.160 7 C -0.057 4.057 8 C -0.047 4.047 9 C 0.036 3.964 10 C -0.093 4.093 11 C -0.199 4.199 12 C 0.113 3.887 13 O -0.181 6.181 14 C -0.472 4.472 15 H 0.088 0.912 16 C 0.015 3.985 17 N -0.865 5.865 18 Si 1.099 2.901 19 H -0.278 1.278 20 H -0.280 1.280 21 H -0.273 1.273 22 C 0.031 3.969 23 N -0.422 5.422 24 H 0.088 0.912 25 H 0.069 0.931 26 H 0.078 0.922 27 H 0.144 0.856 28 H 0.145 0.855 29 H 0.121 0.879 30 H 0.140 0.860 31 H 0.286 0.714 32 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.760 12.415 -2.159 15.939 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C 0.029 3.971 3 N -0.192 5.192 4 C 0.004 3.996 5 Cl -0.015 7.015 6 C -0.181 4.181 7 C -0.084 4.084 8 C -0.050 4.050 9 C -0.099 4.099 10 C -0.113 4.113 11 C -0.225 4.225 12 C 0.055 3.945 13 O -0.081 6.081 14 C -0.547 4.547 15 H 0.106 0.894 16 C -0.193 4.193 17 N -0.494 5.494 18 Si 0.922 3.078 19 H -0.204 1.204 20 H -0.206 1.206 21 H -0.197 1.197 22 C -0.133 4.133 23 N -0.131 5.131 24 H 0.106 0.894 25 H 0.088 0.912 26 H 0.097 0.903 27 H 0.161 0.839 28 H 0.163 0.837 29 H 0.139 0.861 30 H 0.158 0.842 31 H 0.096 0.904 32 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 8.635 12.259 -1.841 15.108 hybrid contribution 1.268 0.362 -0.295 1.351 sum 9.903 12.621 -2.136 16.185 Atomic orbital electron populations 1.20675 0.87604 1.02681 1.04012 1.21301 0.97124 0.85799 0.92882 1.66764 1.08142 1.30275 1.13996 1.21549 0.89980 0.87048 1.01038 1.98384 1.77117 1.29355 1.96628 1.21648 1.01355 0.90968 1.04081 1.21650 0.93365 0.97942 0.95404 1.19350 0.92838 0.92940 0.99874 1.18700 0.98565 0.93258 0.99399 1.21649 0.99002 0.92644 0.97986 1.21469 0.99272 0.98812 1.02915 1.20399 0.91137 0.88672 0.94315 1.83642 1.47644 1.18290 1.58560 1.22372 1.21728 0.90102 1.20533 0.89413 1.26701 0.94893 0.97959 0.99712 1.70553 1.22733 1.36785 1.19355 0.83047 0.75726 0.74312 0.74720 1.20381 1.20581 1.19748 1.21741 1.02324 0.88341 1.00857 1.67442 1.04444 1.21715 1.19538 0.89351 0.91200 0.90343 0.83869 0.83724 0.86122 0.84228 0.90353 0.82958 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.29 8.87 36.01 0.32 -0.97 16 2 C 0.17 2.55 6.81 -82.22 -0.56 1.99 16 3 N -0.48 -7.28 10.24 -6.33 -0.06 -7.34 16 4 C 0.17 2.24 7.27 -17.39 -0.13 2.12 16 5 Cl -0.04 -0.50 29.10 -51.86 -1.51 -2.00 16 6 C -0.16 -1.84 9.86 -39.45 -0.39 -2.23 16 7 C -0.06 -0.72 9.59 -38.94 -0.37 -1.09 16 8 C -0.05 -0.71 5.62 -104.75 -0.59 -1.30 16 9 C 0.04 0.61 5.48 -82.93 -0.45 0.16 16 10 C -0.09 -1.56 9.52 -39.14 -0.37 -1.93 16 11 C -0.20 -3.90 9.25 -39.14 -0.36 -4.26 16 12 C 0.11 2.45 6.67 -38.87 -0.26 2.19 16 13 O -0.18 -4.60 9.16 0.23 0.00 -4.60 16 14 C -0.47 -12.08 9.49 30.89 0.29 -11.79 16 15 H 0.09 2.09 5.25 -52.49 -0.28 1.81 16 16 C 0.02 0.39 5.49 -17.51 -0.10 0.29 16 17 N -0.86 -23.93 13.70 55.48 0.76 -23.17 16 18 Si 1.10 21.72 29.92 -169.99 -5.09 16.64 16 19 H -0.28 -5.25 7.11 56.52 0.40 -4.85 16 20 H -0.28 -5.14 7.11 56.52 0.40 -4.74 16 21 H -0.27 -5.37 7.11 56.52 0.40 -4.97 16 22 C 0.03 0.62 11.14 -17.36 -0.19 0.42 16 23 N -0.42 -7.77 8.75 -9.62 -0.08 -7.85 16 24 H 0.09 1.23 8.14 -51.93 -0.42 0.81 16 25 H 0.07 0.88 8.14 -51.93 -0.42 0.45 16 26 H 0.08 1.16 6.99 -51.93 -0.36 0.80 16 27 H 0.14 1.22 8.06 -52.48 -0.42 0.80 16 28 H 0.15 1.51 8.03 -52.48 -0.42 1.09 16 29 H 0.12 1.66 8.00 -52.49 -0.42 1.24 16 30 H 0.14 2.70 5.75 -52.49 -0.30 2.40 16 31 H 0.29 8.05 7.97 -40.82 -0.33 7.73 16 32 H 0.15 2.75 8.06 -52.49 -0.42 2.33 16 LS Contribution 301.64 15.07 4.55 4.55 Total: -1.00 -28.09 301.64 -7.19 -35.28 By element: Atomic # 1 Polarization: 7.49 SS G_CDS: -2.59 Total: 4.90 kcal Atomic # 6 Polarization: -13.23 SS G_CDS: -3.16 Total: -16.40 kcal Atomic # 7 Polarization: -38.97 SS G_CDS: 0.61 Total: -38.36 kcal Atomic # 8 Polarization: -4.60 SS G_CDS: 0.00 Total: -4.60 kcal Atomic # 14 Polarization: 21.72 SS G_CDS: -5.09 Total: 16.64 kcal Atomic # 17 Polarization: -0.50 SS G_CDS: -1.51 Total: -2.00 kcal Total LS contribution 4.55 Total: 4.55 kcal Total: -28.09 -7.19 -35.28 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001245773747.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 59.136 kcal (2) G-P(sol) polarization free energy of solvation -28.087 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.049 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.192 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.279 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.857 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds