Wall clock time and date at job start Tue Mar 31 2020 06:21:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35749 * 117.00157 * 2 1 4 4 C 1.38594 * 120.13446 * 0.02562 * 3 2 1 5 5 C 1.38149 * 120.10458 * 179.97438 * 4 3 2 6 6 C 1.38663 * 120.38463 * 0.02562 * 5 4 3 7 7 Cl 1.73599 * 119.86774 * 179.97438 * 6 5 4 8 8 C 1.37912 * 120.27017 * 0.02562 * 6 5 4 9 9 C 1.39743 * 119.88128 * 359.70803 * 8 6 5 10 10 C 1.47606 * 120.18479 * 180.32121 * 9 8 6 11 11 N 1.33037 * 120.54872 * 230.13236 * 10 9 8 12 12 C 1.31903 * 120.03228 * 179.74371 * 11 10 9 13 13 C 1.39028 * 121.21926 * 0.56770 * 12 11 10 14 14 N 1.31520 * 121.14384 * 359.68319 * 13 12 11 15 15 C 1.34091 * 119.85881 * 0.03373 * 14 13 12 16 16 C 1.40726 * 120.57616 * 179.97438 * 15 14 13 17 17 H 1.08000 * 119.99621 * 188.21914 * 16 15 14 18 18 C 1.40160 * 120.00067 * 8.21315 * 16 15 14 19 19 N 1.30689 * 120.00100 * 0.02562 * 18 16 15 20 20 Si 1.86800 * 119.99678 * 180.02562 * 18 16 15 21 21 H 1.48504 * 109.47349 * 359.97438 * 20 18 16 22 22 H 1.48503 * 109.47374 * 120.00418 * 20 18 16 23 23 H 1.48510 * 109.47138 * 240.00250 * 20 18 16 24 24 H 1.09000 * 109.46950 * 59.99638 * 1 2 3 25 25 H 1.09000 * 109.47187 * 300.00427 * 1 2 3 26 26 H 1.08990 * 109.47158 * 179.97438 * 1 2 3 27 27 H 1.07997 * 119.94410 * 359.97438 * 4 3 2 28 28 H 1.07999 * 119.80868 * 180.02562 * 5 4 3 29 29 H 1.07992 * 120.05751 * 180.02562 * 8 6 5 30 30 H 1.07998 * 119.38927 * 180.25519 * 12 11 10 31 31 H 1.08000 * 119.42616 * 179.72024 * 13 12 11 32 32 H 0.96997 * 119.99687 * 179.97438 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0453 1.2095 0.0000 4 6 1.2932 2.3737 0.0005 5 6 1.9211 3.6042 0.0011 6 6 3.3054 3.6853 0.0005 7 17 4.0803 5.2387 0.0005 8 6 4.0690 2.5370 -0.0011 9 6 3.4456 1.2863 0.0040 10 6 4.2564 0.0529 0.0095 11 7 4.0145 -0.9193 -0.8658 12 6 4.7487 -2.0151 -0.8551 13 6 5.7745 -2.1861 0.0675 14 7 6.0513 -1.2576 0.9569 15 6 5.3365 -0.1234 0.9824 16 6 5.6193 0.8798 1.9280 17 1 4.9586 1.7281 2.0291 18 6 6.7582 0.7780 2.7385 19 7 7.5579 -0.2484 2.6158 20 14 7.1331 2.1093 3.9940 21 1 6.0812 3.1560 3.9348 22 1 7.1629 1.5132 5.3538 23 1 8.4536 2.7177 3.6912 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3633 0.5139 0.8899 26 1 -0.3633 -1.0276 -0.0005 27 1 0.2147 2.3186 0.0005 28 1 1.3304 4.5083 0.0019 29 1 5.1468 2.6041 -0.0011 30 1 4.5459 -2.7959 -1.5731 31 1 6.3547 -3.0969 0.0531 32 1 8.3463 -0.3186 3.1764 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001245812290.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:21:32 Heat of formation + Delta-G solvation = 19.713425 kcal Electronic energy + Delta-G solvation = -20313.683306 eV Core-core repulsion = 17072.310727 eV Total energy + Delta-G solvation = -3241.372579 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 290.056 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -39.79901 -38.46467 -37.17707 -35.74419 -34.17431 -32.52921 -31.40614 -29.55042 -28.90991 -26.89927 -26.15732 -23.47986 -22.13444 -21.44965 -20.78058 -17.76261 -17.63237 -16.26096 -16.18525 -15.67245 -15.31060 -14.84735 -14.58391 -14.16200 -13.83796 -13.51942 -12.98139 -12.76305 -12.65589 -12.26469 -11.74273 -11.63074 -11.58489 -11.46206 -11.37648 -10.93670 -10.80066 -10.43412 -10.32245 -10.18931 -9.90657 -9.56251 -9.22538 -8.56279 -7.89913 -7.52886 -7.29211 -6.61231 -4.76553 1.53233 1.71774 2.44665 2.57440 2.93347 2.97923 3.04015 3.21038 3.71306 3.76620 4.10884 4.55939 5.03916 5.13555 5.28387 5.35287 5.51398 5.56904 5.64936 5.73816 5.92614 6.04223 6.19384 6.23659 6.41124 6.48987 6.59694 6.72228 6.82716 6.94454 6.98549 7.23338 7.63380 7.84561 7.95645 8.29357 8.57568 9.23428 9.78618 9.98143 Molecular weight = 290.06amu Principal moments of inertia in cm(-1) A = 0.011027 B = 0.008497 C = 0.005504 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2538.589183 B = 3294.460830 C = 5086.117393 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.289 6.289 3 C 0.139 3.861 4 C -0.205 4.205 5 C -0.090 4.090 6 C -0.071 4.071 7 Cl -0.087 7.087 8 C -0.058 4.058 9 C 0.014 3.986 10 C -0.029 4.029 11 N -0.394 5.394 12 C -0.126 4.126 13 C 0.093 3.907 14 N -0.461 5.461 15 C 0.226 3.774 16 C -0.395 4.395 17 H 0.097 0.903 18 C 0.065 3.935 19 N -0.700 5.700 20 Si 0.907 3.093 21 H -0.252 1.252 22 H -0.269 1.269 23 H -0.268 1.268 24 H 0.050 0.950 25 H 0.050 0.950 26 H 0.094 0.906 27 H 0.129 0.871 28 H 0.126 0.874 29 H 0.145 0.855 30 H 0.125 0.875 31 H 0.127 0.873 32 H 0.280 0.720 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.984 5.423 -1.476 9.764 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.200 6.200 3 C 0.092 3.908 4 C -0.224 4.224 5 C -0.109 4.109 6 C -0.097 4.097 7 Cl -0.059 7.059 8 C -0.077 4.077 9 C 0.012 3.988 10 C -0.178 4.178 11 N -0.106 5.106 12 C -0.286 4.286 13 C -0.077 4.077 14 N -0.177 5.177 15 C 0.100 3.900 16 C -0.425 4.425 17 H 0.115 0.885 18 C -0.163 4.163 19 N -0.320 5.320 20 Si 0.730 3.270 21 H -0.175 1.175 22 H -0.194 1.194 23 H -0.193 1.193 24 H 0.069 0.931 25 H 0.068 0.932 26 H 0.113 0.887 27 H 0.147 0.853 28 H 0.144 0.856 29 H 0.162 0.838 30 H 0.142 0.858 31 H 0.145 0.855 32 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -7.589 5.192 -1.379 9.297 hybrid contribution 0.025 0.613 0.534 0.813 sum -7.563 5.805 -0.844 9.571 Atomic orbital electron populations 1.23006 0.79838 1.03451 1.00625 1.86270 1.19786 1.26190 1.87788 1.19253 0.91730 0.84131 0.95681 1.20947 0.99600 0.91580 1.10290 1.20618 0.92174 0.97459 1.00676 1.20549 0.92567 0.85900 1.10701 1.98320 1.81656 1.28516 1.97398 1.21064 1.00835 0.88867 0.96976 1.17549 0.88456 0.92005 1.00827 1.20872 1.01959 0.94380 1.00575 1.67738 1.23107 0.99625 1.20112 1.22374 1.01722 0.98476 1.06059 1.23394 0.94510 0.97878 0.91965 1.69559 1.26456 1.00653 1.21051 1.20344 0.87527 0.91253 0.90870 1.19777 1.05667 1.04702 1.12315 0.88504 1.26222 0.95730 0.96583 0.97791 1.70053 1.08070 1.24314 1.29519 0.86229 0.79874 0.81036 0.79863 1.17547 1.19399 1.19299 0.93094 0.93177 0.88737 0.85277 0.85582 0.83767 0.85767 0.85505 0.90863 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.34 9.81 101.05 0.99 1.33 16 2 O -0.29 -5.55 9.52 -18.96 -0.18 -5.73 16 3 C 0.14 2.70 6.68 -38.70 -0.26 2.45 16 4 C -0.21 -3.22 9.03 -39.48 -0.36 -3.58 16 5 C -0.09 -1.38 9.81 -39.46 -0.39 -1.76 16 6 C -0.07 -1.21 6.31 -39.54 -0.25 -1.46 16 7 Cl -0.09 -1.35 28.94 -51.86 -1.50 -2.85 16 8 C -0.06 -1.15 7.52 -39.14 -0.29 -1.44 16 9 C 0.01 0.31 5.18 -104.76 -0.54 -0.24 16 10 C -0.03 -0.73 6.19 -80.23 -0.50 -1.22 16 11 N -0.39 -9.85 9.89 -7.86 -0.08 -9.92 16 12 C -0.13 -2.94 11.17 -17.23 -0.19 -3.13 16 13 C 0.09 2.21 11.17 -17.39 -0.19 2.01 16 14 N -0.46 -12.40 8.12 -9.56 -0.08 -12.47 16 15 C 0.23 6.01 6.67 -82.64 -0.55 5.46 16 16 C -0.39 -9.96 7.91 -37.92 -0.30 -10.26 16 17 H 0.10 2.32 5.82 -52.49 -0.31 2.01 16 18 C 0.06 1.56 5.50 -17.32 -0.10 1.46 16 19 N -0.70 -17.58 11.54 55.56 0.64 -16.94 16 20 Si 0.91 17.67 29.56 -169.99 -5.02 12.65 16 21 H -0.25 -4.86 7.11 56.52 0.40 -4.46 16 22 H -0.27 -5.16 7.11 56.52 0.40 -4.76 16 23 H -0.27 -5.11 7.11 56.52 0.40 -4.71 16 24 H 0.05 0.57 7.66 -51.93 -0.40 0.17 16 25 H 0.05 0.56 7.66 -51.93 -0.40 0.17 16 26 H 0.09 1.05 8.14 -51.93 -0.42 0.63 16 27 H 0.13 1.60 6.30 -52.49 -0.33 1.27 16 28 H 0.13 1.56 8.06 -52.49 -0.42 1.14 16 29 H 0.14 2.97 7.40 -52.49 -0.39 2.58 16 30 H 0.12 2.51 8.06 -52.49 -0.42 2.08 16 31 H 0.13 2.59 8.06 -52.49 -0.42 2.17 16 32 H 0.28 6.30 8.29 -40.82 -0.34 5.96 16 LS Contribution 297.31 15.07 4.48 4.48 Total: -1.00 -29.62 297.31 -7.31 -36.93 By element: Atomic # 1 Polarization: 6.89 SS G_CDS: -2.65 Total: 4.25 kcal Atomic # 6 Polarization: -7.46 SS G_CDS: -2.93 Total: -10.39 kcal Atomic # 7 Polarization: -39.82 SS G_CDS: 0.49 Total: -39.34 kcal Atomic # 8 Polarization: -5.55 SS G_CDS: -0.18 Total: -5.73 kcal Atomic # 14 Polarization: 17.67 SS G_CDS: -5.02 Total: 12.65 kcal Atomic # 17 Polarization: -1.35 SS G_CDS: -1.50 Total: -2.85 kcal Total LS contribution 4.48 Total: 4.48 kcal Total: -29.62 -7.31 -36.93 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001245812290.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 56.647 kcal (2) G-P(sol) polarization free energy of solvation -29.621 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.026 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.313 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.934 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.713 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds