Wall clock time and date at job start Tue Mar 31 2020 06:23:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35582 * 117.00143 * 2 1 4 4 C 1.39133 * 119.51673 * 180.02562 * 3 2 1 5 5 C 1.38011 * 119.29947 * 180.02562 * 4 3 2 6 6 C 1.40202 * 118.37731 * 359.97438 * 5 4 3 7 7 C 1.47820 * 120.51096 * 179.97438 * 6 5 4 8 8 C 1.39977 * 119.45196 * 312.69195 * 7 6 5 9 9 C 1.36555 * 119.46320 * 180.02562 * 8 7 6 10 10 C 1.41332 * 118.41861 * 359.97438 * 9 8 7 11 11 C 1.41031 * 120.54953 * 179.97438 * 10 9 8 12 12 H 1.07996 * 120.00247 * 150.39223 * 11 10 9 13 13 C 1.39987 * 119.99538 * 330.39131 * 11 10 9 14 14 N 1.30816 * 120.00301 * 345.02726 * 13 11 10 15 15 Si 1.86807 * 119.99848 * 165.02144 * 13 11 10 16 16 H 1.48499 * 109.47112 * 90.00314 * 15 13 11 17 17 H 1.48501 * 109.46975 * 209.99965 * 15 13 11 18 18 H 1.48500 * 109.47026 * 330.00107 * 15 13 11 19 19 C 1.40951 * 118.90860 * 359.97438 * 10 9 8 20 20 N 1.31265 * 120.40225 * 359.73112 * 19 10 9 21 21 C 1.39720 * 118.98491 * 0.02562 * 6 5 4 22 22 Cl 1.73592 * 119.70623 * 180.02562 * 21 6 5 23 23 N 1.31822 * 120.58521 * 0.02562 * 21 6 5 24 24 H 1.09007 * 109.46869 * 300.00272 * 1 2 3 25 25 H 1.08999 * 109.46962 * 60.00215 * 1 2 3 26 26 H 1.08994 * 109.47082 * 180.02562 * 1 2 3 27 27 H 1.07998 * 120.34589 * 0.02562 * 4 3 2 28 28 H 1.08007 * 120.81463 * 179.97438 * 5 4 3 29 29 H 1.07996 * 120.27466 * 0.02562 * 8 7 6 30 30 H 1.07998 * 120.78997 * 180.02562 * 9 8 7 31 31 H 0.96999 * 120.00108 * 180.02562 * 14 13 11 32 32 H 1.07998 * 119.79847 * 180.02562 * 19 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0445 1.2080 0.0000 4 6 3.4345 1.2691 -0.0005 5 6 4.0565 2.5011 0.0000 6 6 3.2555 3.6519 0.0005 7 6 3.8721 4.9953 0.0017 8 6 4.9100 5.2755 0.8981 9 6 5.4793 6.5167 0.8998 10 6 4.9944 7.4804 -0.0133 11 6 5.5493 8.7764 -0.0498 12 1 5.5580 9.3343 -0.9744 13 6 6.0888 9.3397 1.1127 14 7 5.8258 8.8096 2.2793 15 14 7.1847 10.8482 0.9978 16 1 6.3510 12.0737 1.0891 17 1 8.1660 10.8331 2.1123 18 1 7.9080 10.8370 -0.2990 19 6 3.9469 7.1249 -0.8868 20 7 3.4359 5.9162 -0.8541 21 6 1.8656 3.5094 0.0010 22 17 0.8561 4.9215 0.0010 23 7 1.3141 2.3120 0.0015 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0276 0.0005 27 1 4.0205 0.3619 -0.0014 28 1 5.1339 2.5770 0.0000 29 1 5.2577 4.5164 1.5830 30 1 6.2817 6.7560 1.5819 31 1 6.1994 9.2002 3.0848 32 1 3.5655 7.8499 -1.5906 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001245871155.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:23:03 Heat of formation + Delta-G solvation = 12.925931 kcal Electronic energy + Delta-G solvation = -19495.161329 eV Core-core repulsion = 16253.494422 eV Total energy + Delta-G solvation = -3241.666907 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 290.056 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -40.38141 -38.56332 -37.53290 -35.93644 -34.30220 -32.54226 -31.22754 -30.71316 -29.15522 -27.27398 -25.45981 -23.37764 -22.91342 -21.55433 -20.84655 -18.31805 -17.50508 -17.01201 -16.24244 -15.95716 -15.44661 -14.76345 -14.66435 -14.24800 -13.93467 -13.62326 -13.40276 -12.96615 -12.51636 -12.38246 -11.90254 -11.73845 -11.67620 -11.52240 -11.40066 -11.18397 -10.77728 -10.60877 -10.51595 -9.99663 -9.66949 -9.57565 -9.44595 -8.39791 -8.34985 -8.09328 -7.40566 -6.99328 -4.61745 1.19918 1.39433 2.29951 2.52698 2.89690 2.94459 2.98394 3.07420 3.20096 3.74149 3.90449 4.44956 4.72760 5.04791 5.17883 5.21211 5.32359 5.36852 5.53923 5.58807 5.65541 5.97618 6.07228 6.31189 6.46399 6.60410 6.68644 6.77248 6.91898 7.16014 7.26593 7.55609 7.72335 7.78770 7.89296 8.28241 8.50298 8.56893 9.49334 9.90721 Molecular weight = 290.06amu Principal moments of inertia in cm(-1) A = 0.036408 B = 0.003800 C = 0.003598 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 768.881391 B = 7366.010283 C = 7779.697332 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.041 3.959 2 O -0.310 6.310 3 C 0.310 3.690 4 C -0.184 4.184 5 C -0.038 4.038 6 C -0.044 4.044 7 C -0.004 4.004 8 C -0.117 4.117 9 C -0.137 4.137 10 C 0.075 3.925 11 C -0.441 4.441 12 H 0.086 0.914 13 C 0.074 3.926 14 N -0.782 5.782 15 Si 0.914 3.086 16 H -0.267 1.267 17 H -0.274 1.274 18 H -0.258 1.258 19 C -0.012 4.012 20 N -0.434 5.434 21 C 0.216 3.784 22 Cl -0.012 7.012 23 N -0.538 5.538 24 H 0.057 0.943 25 H 0.057 0.943 26 H 0.092 0.908 27 H 0.143 0.857 28 H 0.148 0.852 29 H 0.098 0.902 30 H 0.122 0.878 31 H 0.286 0.714 32 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.008 -9.766 -0.954 10.263 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.054 4.054 2 O -0.217 6.217 3 C 0.131 3.869 4 C -0.204 4.204 5 C -0.064 4.064 6 C -0.048 4.048 7 C -0.139 4.139 8 C -0.138 4.138 9 C -0.162 4.162 10 C 0.071 3.929 11 C -0.470 4.470 12 H 0.104 0.896 13 C -0.147 4.147 14 N -0.406 5.406 15 Si 0.738 3.262 16 H -0.192 1.192 17 H -0.199 1.199 18 H -0.182 1.182 19 C -0.177 4.177 20 N -0.141 5.141 21 C 0.053 3.947 22 Cl 0.017 6.983 23 N -0.264 5.264 24 H 0.076 0.924 25 H 0.076 0.924 26 H 0.111 0.889 27 H 0.161 0.839 28 H 0.166 0.834 29 H 0.117 0.883 30 H 0.139 0.861 31 H 0.097 0.903 32 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -4.534 -10.187 -1.243 11.220 hybrid contribution 1.583 1.249 0.774 2.160 sum -2.951 -8.939 -0.469 9.425 Atomic orbital electron populations 1.22805 0.77579 1.02481 1.02562 1.86184 1.22649 1.24430 1.88457 1.19520 0.89033 0.83575 0.94733 1.20937 0.91545 0.99390 1.08566 1.21507 1.00623 0.89779 0.94492 1.19202 0.90644 0.94142 1.00836 1.18312 1.01879 0.91990 1.01712 1.21185 0.96912 0.97422 0.98266 1.21193 1.01361 0.91527 1.02150 1.18604 0.89797 0.93557 0.90965 1.19611 1.31713 0.99449 0.96272 0.89563 1.26032 0.94809 0.99167 0.94656 1.69776 1.33761 1.38030 0.99004 0.86202 0.79922 0.80651 0.79461 1.19185 1.19897 1.18180 1.22509 0.97852 0.92883 1.04474 1.67077 1.26169 1.01580 1.19289 1.21447 0.88568 0.86834 0.97855 1.98403 1.69033 1.34827 1.96026 1.66403 1.41550 0.97910 1.20491 0.92395 0.92379 0.88931 0.83930 0.83388 0.88341 0.86060 0.90279 0.85274 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.46 10.37 101.05 1.05 1.50 16 2 O -0.31 -4.34 10.47 -18.44 -0.19 -4.53 16 3 C 0.31 4.96 7.49 -16.98 -0.13 4.83 16 4 C -0.18 -2.64 10.02 -39.33 -0.39 -3.04 16 5 C -0.04 -0.60 9.56 -38.93 -0.37 -0.97 16 6 C -0.04 -0.86 5.62 -104.69 -0.59 -1.44 16 7 C 0.00 -0.08 5.90 -82.76 -0.49 -0.57 16 8 C -0.12 -2.58 9.43 -39.54 -0.37 -2.95 16 9 C -0.14 -3.30 8.70 -39.01 -0.34 -3.64 16 10 C 0.08 1.87 5.53 -106.64 -0.59 1.28 16 11 C -0.44 -10.70 9.05 -37.87 -0.34 -11.04 16 12 H 0.09 1.98 7.89 -52.49 -0.41 1.56 16 13 C 0.07 1.69 5.18 -17.33 -0.09 1.60 16 14 N -0.78 -18.73 11.17 55.55 0.62 -18.11 16 15 Si 0.91 17.14 29.59 -169.99 -5.03 12.11 16 16 H -0.27 -4.98 7.11 56.52 0.40 -4.58 16 17 H -0.27 -5.05 7.11 56.52 0.40 -4.64 16 18 H -0.26 -4.80 7.11 56.52 0.40 -4.40 16 19 C -0.01 -0.29 10.97 -16.77 -0.18 -0.47 16 20 N -0.43 -10.18 8.77 -9.11 -0.08 -10.26 16 21 C 0.22 4.20 7.30 -17.00 -0.12 4.08 16 22 Cl -0.01 -0.23 27.08 -51.86 -1.40 -1.63 16 23 N -0.54 -9.60 9.16 -10.06 -0.09 -9.70 16 24 H 0.06 0.66 8.10 -51.93 -0.42 0.24 16 25 H 0.06 0.66 8.10 -51.93 -0.42 0.24 16 26 H 0.09 0.72 8.14 -51.93 -0.42 0.30 16 27 H 0.14 1.60 8.06 -52.49 -0.42 1.18 16 28 H 0.15 2.02 8.02 -52.48 -0.42 1.59 16 29 H 0.10 1.90 7.98 -52.49 -0.42 1.48 16 30 H 0.12 2.95 6.54 -52.49 -0.34 2.61 16 31 H 0.29 6.21 8.30 -40.82 -0.34 5.87 16 32 H 0.13 2.87 8.06 -52.49 -0.42 2.45 16 LS Contribution 301.86 15.07 4.55 4.55 Total: -1.00 -27.05 301.86 -7.43 -34.49 By element: Atomic # 1 Polarization: 6.75 SS G_CDS: -2.84 Total: 3.91 kcal Atomic # 6 Polarization: -7.87 SS G_CDS: -2.96 Total: -10.83 kcal Atomic # 7 Polarization: -38.51 SS G_CDS: 0.45 Total: -38.06 kcal Atomic # 8 Polarization: -4.34 SS G_CDS: -0.19 Total: -4.53 kcal Atomic # 14 Polarization: 17.14 SS G_CDS: -5.03 Total: 12.11 kcal Atomic # 17 Polarization: -0.23 SS G_CDS: -1.40 Total: -1.63 kcal Total LS contribution 4.55 Total: 4.55 kcal Total: -27.05 -7.43 -34.49 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001245871155.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.413 kcal (2) G-P(sol) polarization free energy of solvation -27.052 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.360 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.434 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.487 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.926 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds