Wall clock time and date at job start Tue Mar 31 2020 06:58:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.36713 * 120.93164 * 2 1 4 4 Cl 1.73601 * 120.04486 * 0.02562 * 3 2 1 5 5 C 1.39404 * 119.90897 * 180.02562 * 3 2 1 6 6 C 1.50701 * 119.13769 * 179.97438 * 5 3 2 7 7 N 1.46501 * 109.47243 * 89.99427 * 6 5 3 8 8 C 1.46502 * 120.00021 * 270.00274 * 7 6 5 9 9 C 1.36936 * 119.99757 * 90.00897 * 7 6 5 10 10 H 1.07998 * 120.00249 * 22.19074 * 9 7 6 11 11 C 1.38811 * 119.99719 * 202.20027 * 9 7 6 12 12 N 1.31613 * 120.00071 * 11.37989 * 11 9 7 13 13 Si 1.86807 * 119.99770 * 191.38008 * 11 9 7 14 14 H 1.48500 * 109.46788 * 59.99815 * 13 11 9 15 15 H 1.48495 * 109.46856 * 179.97438 * 13 11 9 16 16 H 1.48497 * 109.46845 * 299.99657 * 13 11 9 17 17 N 1.31103 * 121.73213 * 0.02562 * 5 3 2 18 18 C 1.33648 * 121.33448 * 359.97438 * 17 5 3 19 19 C 1.40612 * 121.06096 * 179.97438 * 18 17 5 20 20 C 1.36071 * 119.75140 * 180.02562 * 19 18 17 21 21 C 1.39360 * 121.07081 * 0.02562 * 20 19 18 22 22 C 1.36126 * 120.87617 * 359.97438 * 21 20 19 23 23 C 1.40450 * 119.61257 * 359.72243 * 22 21 20 24 24 H 1.09001 * 109.47035 * 89.99760 * 1 2 3 25 25 H 1.09003 * 109.46951 * 330.00531 * 1 2 3 26 26 H 1.08993 * 109.47387 * 210.00011 * 1 2 3 27 27 H 1.08999 * 109.47304 * 210.00231 * 6 5 3 28 28 H 1.09002 * 109.46580 * 329.99815 * 6 5 3 29 29 H 1.08999 * 109.46566 * 93.80497 * 8 7 6 30 30 H 1.09001 * 109.46730 * 213.79946 * 8 7 6 31 31 H 1.08993 * 109.47336 * 333.80082 * 8 7 6 32 32 H 0.97003 * 120.00229 * 180.02562 * 12 11 9 33 33 H 1.07998 * 120.12394 * 359.97438 * 19 18 17 34 34 H 1.08001 * 119.46375 * 179.97438 * 20 19 18 35 35 H 1.08001 * 119.56049 * 179.97438 * 21 20 19 36 36 H 1.07999 * 120.19727 * 180.02562 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2097 1.1727 0.0000 4 17 1.3674 2.6907 0.0007 5 6 3.6035 1.1478 -0.0005 6 6 4.3607 2.4508 -0.0011 7 7 4.6064 2.8734 1.3799 8 6 3.6323 3.7221 2.0706 9 6 5.7468 2.4753 2.0251 10 1 6.6123 2.1723 1.4545 11 6 5.7902 2.4608 3.4124 12 7 4.6823 2.6100 4.1071 13 14 7.4211 2.2294 4.2935 14 1 8.3472 3.3275 3.9169 15 1 7.1982 2.2520 5.7614 16 1 8.0143 0.9255 3.9024 17 7 4.2730 0.0206 -0.0016 18 6 3.6465 -1.1599 -0.0016 19 6 4.3703 -2.3654 -0.0032 20 6 3.7051 -3.5524 -0.0038 21 6 2.3122 -3.5963 -0.0033 22 6 1.5772 -2.4505 -0.0017 23 6 2.2302 -1.2071 0.0053 24 1 -0.3633 0.0000 -1.0277 25 1 -0.3633 0.8901 0.5138 26 1 -0.3634 -0.8899 0.5138 27 1 5.3125 2.3178 -0.5153 28 1 3.7734 3.2119 -0.5149 29 1 2.9446 3.0967 2.6397 30 1 4.1548 4.3974 2.7482 31 1 3.0730 4.3037 1.3379 32 1 4.7127 2.6003 5.0766 33 1 5.4502 -2.3492 -0.0049 34 1 4.2658 -4.4755 -0.0055 35 1 1.8093 -4.5521 -0.0041 36 1 0.4982 -2.4974 -0.0009 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000263919632.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:58:44 Heat of formation + Delta-G solvation = 70.290059 kcal Electronic energy + Delta-G solvation = -20783.815652 eV Core-core repulsion = 17680.469335 eV Total energy + Delta-G solvation = -3103.346317 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 290.088 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -40.55884 -37.37162 -36.05038 -35.34072 -34.17144 -31.71072 -30.07154 -29.91374 -27.58756 -26.56482 -25.80526 -23.20733 -22.73593 -21.18657 -20.14275 -17.88588 -17.36406 -16.66961 -15.82895 -14.96900 -14.80765 -14.48428 -14.09679 -13.72337 -13.55897 -13.46172 -13.22505 -12.87244 -12.65431 -12.08676 -11.90244 -11.75749 -11.47652 -11.31049 -11.20823 -10.98273 -10.84774 -10.80011 -10.41602 -10.27217 -9.94847 -9.90632 -9.71007 -8.96174 -8.57927 -8.18600 -7.87474 -6.85998 -5.79730 -3.18310 0.65903 1.12424 2.25114 2.47621 3.17618 3.39915 3.42950 3.44958 4.37486 4.51391 4.71412 4.76498 4.89732 5.03818 5.06566 5.29823 5.40938 5.44370 5.55850 5.61220 5.65049 5.71458 5.85909 6.07565 6.11635 6.19495 6.28965 6.43520 6.57860 6.62524 6.65387 6.79822 6.86618 7.14183 7.36829 7.72076 7.80253 8.31459 8.53606 9.16400 9.76045 10.24525 11.23961 Molecular weight = 290.09amu Principal moments of inertia in cm(-1) A = 0.014438 B = 0.006828 C = 0.005172 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1938.884853 B = 4099.868227 C = 5412.028990 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.035 4.035 3 C -0.071 4.071 4 Cl -0.058 7.058 5 C 0.168 3.832 6 C 0.181 3.819 7 N -0.574 5.574 8 C 0.162 3.838 9 C -0.240 4.240 10 H 0.076 0.924 11 C 0.002 3.998 12 N -0.900 5.900 13 Si 0.910 3.090 14 H -0.281 1.281 15 H -0.290 1.290 16 H -0.281 1.281 17 N -0.455 5.455 18 C 0.140 3.860 19 C -0.093 4.093 20 C -0.107 4.107 21 C -0.134 4.134 22 C -0.092 4.092 23 C -0.110 4.110 24 H 0.077 0.923 25 H 0.078 0.922 26 H 0.073 0.927 27 H 0.068 0.932 28 H 0.065 0.935 29 H 0.029 0.971 30 H 0.049 0.951 31 H 0.005 0.995 32 H 0.255 0.745 33 H 0.133 0.867 34 H 0.124 0.876 35 H 0.121 0.879 36 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.369 -7.346 -9.482 14.626 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.043 4.043 3 C -0.101 4.101 4 Cl -0.029 7.029 5 C 0.011 3.989 6 C 0.053 3.947 7 N -0.293 5.293 8 C 0.018 3.982 9 C -0.370 4.370 10 H 0.094 0.906 11 C -0.198 4.198 12 N -0.544 5.544 13 Si 0.739 3.261 14 H -0.208 1.208 15 H -0.216 1.216 16 H -0.207 1.207 17 N -0.166 5.166 18 C 0.017 3.983 19 C -0.112 4.112 20 C -0.126 4.126 21 C -0.153 4.153 22 C -0.110 4.110 23 C -0.113 4.113 24 H 0.096 0.904 25 H 0.097 0.903 26 H 0.091 0.909 27 H 0.086 0.914 28 H 0.083 0.917 29 H 0.047 0.953 30 H 0.067 0.933 31 H 0.023 0.977 32 H 0.065 0.935 33 H 0.151 0.849 34 H 0.142 0.858 35 H 0.139 0.861 36 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -7.518 -7.187 -9.240 13.912 hybrid contribution -0.280 -0.338 0.912 1.012 sum -7.798 -7.524 -8.328 13.667 Atomic orbital electron populations 1.20848 0.89884 1.03736 1.02843 1.19894 0.96614 0.90949 0.96882 1.21554 0.93781 0.87072 1.07689 1.98323 1.77318 1.30561 1.96673 1.23097 0.88907 0.97113 0.89763 1.20233 0.97541 0.87649 0.89287 1.44355 1.21447 1.52943 1.10540 1.20938 0.91489 0.92600 0.93201 1.19354 0.89316 1.39365 0.89008 0.90636 1.25140 0.97217 1.00491 0.96917 1.70077 1.25246 1.53134 1.05908 0.86241 0.83056 0.78367 0.78401 1.20775 1.21607 1.20745 1.68154 1.37948 0.96507 1.14013 1.19074 0.89553 0.93068 0.96594 1.20788 1.00353 0.90215 0.99856 1.20803 0.94418 0.97686 0.99734 1.20746 0.94098 0.98051 1.02360 1.20886 0.99552 0.91247 0.99354 1.18529 0.93939 0.93324 1.05501 0.90403 0.90340 0.90865 0.91353 0.91667 0.95306 0.93263 0.97650 0.93499 0.84920 0.85834 0.86122 0.85699 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 21. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.48 9.20 36.00 0.33 -1.14 16 2 C -0.03 -0.59 5.92 -104.24 -0.62 -1.21 16 3 C -0.07 -1.36 6.29 -39.70 -0.25 -1.61 16 4 Cl -0.06 -0.97 23.88 -51.86 -1.24 -2.21 16 5 C 0.17 3.60 6.37 -82.47 -0.52 3.07 16 6 C 0.18 3.92 5.57 -5.19 -0.03 3.89 16 7 N -0.57 -14.55 2.91 -182.50 -0.53 -15.08 16 8 C 0.16 3.99 8.16 59.85 0.49 4.48 16 9 C -0.24 -6.66 9.67 -15.06 -0.15 -6.81 16 10 H 0.08 2.07 7.84 -52.49 -0.41 1.66 16 11 C 0.00 0.04 5.13 -17.43 -0.09 -0.05 16 12 N -0.90 -26.38 10.58 55.49 0.59 -25.79 16 13 Si 0.91 22.18 29.57 -169.99 -5.03 17.16 16 14 H -0.28 -6.71 7.11 56.52 0.40 -6.30 16 15 H -0.29 -7.11 7.11 56.52 0.40 -6.71 16 16 H -0.28 -6.86 7.11 56.52 0.40 -6.46 16 17 N -0.46 -10.04 10.24 -7.20 -0.07 -10.11 16 18 C 0.14 2.72 6.60 -84.85 -0.56 2.16 16 19 C -0.09 -1.54 9.98 -39.47 -0.39 -1.93 16 20 C -0.11 -1.41 9.94 -39.94 -0.40 -1.81 16 21 C -0.13 -1.67 9.95 -39.92 -0.40 -2.07 16 22 C -0.09 -1.26 9.31 -39.51 -0.37 -1.63 16 23 C -0.11 -1.91 5.74 -106.80 -0.61 -2.52 16 24 H 0.08 0.83 8.14 -51.93 -0.42 0.41 16 25 H 0.08 1.00 6.96 -51.93 -0.36 0.64 16 26 H 0.07 0.80 6.52 -51.93 -0.34 0.46 16 27 H 0.07 1.46 8.03 -51.93 -0.42 1.04 16 28 H 0.07 1.26 6.56 -51.93 -0.34 0.92 16 29 H 0.03 0.78 7.45 -51.93 -0.39 0.39 16 30 H 0.05 1.30 7.15 -51.93 -0.37 0.93 16 31 H 0.00 0.11 6.96 -51.93 -0.36 -0.25 16 32 H 0.25 7.27 8.31 -40.82 -0.34 6.93 16 33 H 0.13 2.07 8.06 -52.49 -0.42 1.65 16 34 H 0.12 1.25 8.06 -52.49 -0.42 0.83 16 35 H 0.12 1.11 8.06 -52.49 -0.42 0.69 16 36 H 0.13 1.36 6.45 -52.49 -0.34 1.02 16 LS Contribution 310.90 15.07 4.69 4.69 Total: -1.00 -31.36 310.90 -9.32 -40.68 By element: Atomic # 1 Polarization: 1.99 SS G_CDS: -4.15 Total: -2.16 kcal Atomic # 6 Polarization: -3.60 SS G_CDS: -3.57 Total: -7.17 kcal Atomic # 7 Polarization: -50.97 SS G_CDS: -0.02 Total: -50.99 kcal Atomic # 14 Polarization: 22.18 SS G_CDS: -5.03 Total: 17.16 kcal Atomic # 17 Polarization: -0.97 SS G_CDS: -1.24 Total: -2.21 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -31.36 -9.32 -40.68 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000263919632.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 110.972 kcal (2) G-P(sol) polarization free energy of solvation -31.364 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 79.608 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.318 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.681 kcal (6) G-S(sol) free energy of system = (1) + (5) 70.290 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.52 seconds