Wall clock time and date at job start Tue Mar 31 2020 06:19:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13606 * 1 3 3 C 1.43201 * 179.97438 * 2 1 4 4 C 1.39852 * 120.21364 * 317.23577 * 3 2 1 5 5 Cl 1.73599 * 120.06159 * 359.97438 * 4 3 2 6 6 C 1.37966 * 119.88279 * 179.72111 * 4 3 2 7 7 C 1.38518 * 120.32919 * 0.29570 * 6 4 3 8 8 C 1.38047 * 120.44422 * 359.97438 * 7 6 4 9 9 C 1.38860 * 120.10122 * 0.02562 * 8 7 6 10 10 N 1.39033 * 120.16393 * 180.02562 * 9 8 7 11 11 C 1.46853 * 110.99546 * 296.04446 * 10 9 8 12 12 C 1.53042 * 109.52184 * 185.84339 * 11 10 9 13 13 C 1.53125 * 109.27666 * 300.81642 * 12 11 10 14 14 C 1.53120 * 109.15804 * 57.65707 * 13 12 11 15 15 H 1.08991 * 109.50497 * 62.32523 * 14 13 12 16 16 C 1.50698 * 109.50130 * 182.40537 * 14 13 12 17 17 H 1.08003 * 120.00025 * 119.99233 * 16 14 13 18 18 C 1.37878 * 120.00057 * 299.99916 * 16 14 13 19 19 N 1.31517 * 120.00238 * 179.97438 * 18 16 14 20 20 Si 1.86801 * 119.99804 * 0.02562 * 18 16 14 21 21 H 1.48495 * 109.47348 * 89.99944 * 20 18 16 22 22 H 1.48504 * 109.46750 * 210.00081 * 20 18 16 23 23 H 1.48500 * 109.47007 * 329.99348 * 20 18 16 24 24 C 1.46850 * 111.00434 * 60.24923 * 10 9 8 25 25 H 1.08000 * 119.83420 * 180.27924 * 6 4 3 26 26 H 1.07998 * 119.77571 * 179.97438 * 7 6 4 27 27 H 1.07992 * 119.95019 * 179.97438 * 8 7 6 28 28 H 1.09000 * 109.45912 * 305.85058 * 11 10 9 29 29 H 1.08989 * 109.46587 * 65.82289 * 11 10 9 30 30 H 1.09000 * 109.50585 * 60.75896 * 12 11 10 31 31 H 1.09002 * 109.50193 * 180.87607 * 12 11 10 32 32 H 1.08995 * 109.52347 * 177.56380 * 13 12 11 33 33 H 1.08996 * 109.51955 * 297.75294 * 13 12 11 34 34 H 0.96995 * 120.00391 * 180.02562 * 19 18 16 35 35 H 1.09000 * 109.46043 * 294.17881 * 24 10 9 36 36 H 1.08999 * 109.46001 * 54.14870 * 24 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2722 -0.8863 0.8206 5 17 2.4120 -1.9930 1.8447 6 6 4.6519 -0.8838 0.8109 7 6 5.3440 -0.0026 -0.0034 8 6 4.6627 0.8825 -0.8146 9 6 3.2741 0.8956 -0.8192 10 7 2.5866 1.7861 -1.6361 11 6 2.8545 3.1753 -1.2427 12 6 1.9728 4.1186 -2.0643 13 6 2.2734 3.9231 -3.5529 14 6 2.0330 2.4576 -3.9259 15 1 0.9844 2.2083 -3.7641 16 6 2.3832 2.2436 -5.3759 17 1 3.1540 1.5372 -5.6467 18 6 1.7197 2.9496 -6.3569 19 7 2.0256 2.7632 -7.6223 20 14 0.3871 4.1720 -5.8884 21 1 0.9942 5.5115 -5.6828 22 1 -0.6205 4.2470 -6.9767 23 1 -0.2718 3.7292 -4.6334 24 6 2.9129 1.5625 -3.0503 25 1 5.1948 -1.5722 1.4415 26 1 6.4240 -0.0080 -0.0036 27 1 5.2104 1.5664 -1.4460 28 1 2.6326 3.3019 -0.1830 29 1 3.9035 3.4084 -1.4243 30 1 0.9233 3.8952 -1.8725 31 1 2.1831 5.1505 -1.7830 32 1 1.6172 4.5618 -4.1440 33 1 3.3129 4.1838 -3.7519 34 1 1.5591 3.2601 -8.3124 35 1 3.9618 1.8032 -3.2235 36 1 2.7336 0.5176 -3.3036 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000596322177.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:19:47 Heat of formation + Delta-G solvation = 55.887412 kcal Electronic energy + Delta-G solvation = -20534.570268 eV Core-core repulsion = 17430.599405 eV Total energy + Delta-G solvation = -3103.970863 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 290.088 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -40.44523 -38.14458 -36.67570 -36.19850 -34.11304 -32.29632 -31.40535 -30.44711 -29.34887 -25.08285 -24.54171 -23.87633 -21.94191 -21.25245 -19.19299 -18.86670 -17.25712 -16.50823 -16.13136 -15.44454 -14.94593 -14.85199 -14.35599 -14.03658 -13.83828 -13.37405 -13.08433 -13.03563 -12.75784 -12.66701 -12.55119 -12.32392 -12.14718 -11.75827 -11.60733 -11.29796 -11.22320 -11.14267 -10.65164 -10.22790 -10.06154 -9.82682 -9.28035 -9.11222 -9.03858 -8.84273 -8.56498 -8.29904 -6.11628 -4.11695 0.49840 0.84843 1.74351 2.87956 2.89073 3.24999 3.38273 3.41033 3.69498 3.83881 3.89547 4.38704 4.64340 4.87356 4.93652 5.02508 5.18811 5.22091 5.32345 5.35075 5.62819 5.72652 5.78330 5.89283 6.00780 6.05416 6.10816 6.13519 6.29903 6.33782 6.47702 6.69190 6.70160 7.06993 7.12611 7.44454 7.54134 7.69321 7.74374 8.44868 8.90429 9.50717 11.01348 Molecular weight = 290.09amu Principal moments of inertia in cm(-1) A = 0.023892 B = 0.004517 C = 0.004344 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1171.644503 B = 6197.379039 C = 6444.390602 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.403 5.403 2 C 0.267 3.733 3 C -0.005 4.005 4 C 0.008 3.992 5 Cl -0.056 7.056 6 C -0.121 4.121 7 C -0.070 4.070 8 C -0.146 4.146 9 C 0.168 3.832 10 N -0.520 5.520 11 C 0.070 3.930 12 C -0.121 4.121 13 C -0.124 4.124 14 C 0.020 3.980 15 H 0.037 0.963 16 C -0.516 4.516 17 H 0.074 0.926 18 C 0.073 3.927 19 N -0.900 5.900 20 Si 0.885 3.115 21 H -0.279 1.279 22 H -0.297 1.297 23 H -0.263 1.263 24 C 0.083 3.917 25 H 0.142 0.858 26 H 0.139 0.861 27 H 0.140 0.860 28 H 0.067 0.933 29 H 0.041 0.959 30 H 0.065 0.935 31 H 0.060 0.940 32 H 0.049 0.951 33 H 0.059 0.941 34 H 0.264 0.736 35 H 0.039 0.961 36 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.251 -4.093 18.569 20.728 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.077 5.077 2 C -0.049 4.049 3 C -0.010 4.010 4 C -0.022 4.022 5 Cl -0.027 7.027 6 C -0.140 4.140 7 C -0.089 4.089 8 C -0.167 4.167 9 C 0.070 3.930 10 N -0.242 5.242 11 C -0.056 4.056 12 C -0.159 4.159 13 C -0.161 4.161 14 C 0.001 3.999 15 H 0.055 0.945 16 C -0.554 4.554 17 H 0.092 0.908 18 C -0.129 4.129 19 N -0.538 5.538 20 Si 0.716 3.284 21 H -0.206 1.206 22 H -0.225 1.225 23 H -0.188 1.188 24 C -0.042 4.042 25 H 0.160 0.840 26 H 0.157 0.843 27 H 0.157 0.843 28 H 0.086 0.914 29 H 0.059 0.941 30 H 0.084 0.916 31 H 0.079 0.921 32 H 0.067 0.933 33 H 0.078 0.922 34 H 0.074 0.926 35 H 0.057 0.943 36 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 5.843 -4.205 18.504 19.855 hybrid contribution 0.506 0.791 -0.032 0.940 sum 6.349 -3.414 18.472 19.828 Atomic orbital electron populations 1.81151 1.11774 1.07364 1.07451 1.24950 0.92027 0.93968 0.93975 1.15850 0.85340 0.99265 1.00592 1.20830 0.92560 0.93692 0.95115 1.98399 1.77122 1.61052 1.66084 1.20961 0.91059 1.00840 1.01138 1.21199 1.00572 0.93387 0.93771 1.21915 0.94217 1.00410 1.00142 1.18793 0.90090 0.92241 0.91898 1.59456 1.56861 1.03204 1.04685 1.22083 0.98366 0.86089 0.99032 1.21680 1.00067 0.97196 0.96923 1.22051 1.01034 1.00215 0.92805 1.19178 0.96185 0.89896 0.94641 0.94542 1.20921 1.21757 1.24738 0.88005 0.90805 1.24953 0.96476 0.96652 0.94778 1.69886 1.42108 1.42112 0.99647 0.86865 0.82014 0.81624 0.77927 1.20602 1.22508 1.18835 1.22258 0.98545 1.01251 0.82139 0.84004 0.84314 0.84256 0.91411 0.94102 0.91646 0.92146 0.93268 0.92216 0.92590 0.94251 0.91004 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.40 -7.34 18.54 41.84 0.78 -6.56 16 2 C 0.27 4.33 13.87 -22.47 -0.31 4.02 16 3 C -0.01 -0.07 5.76 -106.56 -0.61 -0.69 16 4 C 0.01 0.09 6.35 -39.08 -0.25 -0.16 16 5 Cl -0.06 -0.60 28.03 -51.86 -1.45 -2.06 16 6 C -0.12 -1.01 9.81 -39.58 -0.39 -1.39 16 7 C -0.07 -0.56 10.02 -39.55 -0.40 -0.95 16 8 C -0.15 -1.55 8.67 -39.42 -0.34 -1.89 16 9 C 0.17 2.27 4.67 -83.56 -0.39 1.88 16 10 N -0.52 -8.44 3.99 -170.89 -0.68 -9.13 16 11 C 0.07 1.02 5.16 -3.83 -0.02 1.00 16 12 C -0.12 -2.00 6.09 -26.64 -0.16 -2.17 16 13 C -0.12 -2.52 4.73 -26.60 -0.13 -2.65 16 14 C 0.02 0.46 1.85 -91.69 -0.17 0.29 16 15 H 0.04 0.90 7.21 -51.93 -0.37 0.53 16 16 C -0.52 -13.96 9.15 -34.44 -0.31 -14.28 16 17 H 0.07 2.14 7.99 -52.48 -0.42 1.72 16 18 C 0.07 2.08 5.45 -17.82 -0.10 1.98 16 19 N -0.90 -27.09 13.96 55.43 0.77 -26.32 16 20 Si 0.89 21.87 24.35 -169.99 -4.14 17.73 16 21 H -0.28 -6.64 6.89 56.52 0.39 -6.25 16 22 H -0.30 -7.43 7.11 56.52 0.40 -7.03 16 23 H -0.26 -6.37 6.53 56.52 0.37 -6.01 16 24 C 0.08 1.55 4.34 -3.83 -0.02 1.53 16 25 H 0.14 0.81 8.06 -52.49 -0.42 0.39 16 26 H 0.14 0.70 8.06 -52.49 -0.42 0.27 16 27 H 0.14 1.39 7.11 -52.49 -0.37 1.01 16 28 H 0.07 0.88 8.10 -51.93 -0.42 0.46 16 29 H 0.04 0.54 7.52 -51.94 -0.39 0.15 16 30 H 0.06 1.16 8.14 -51.93 -0.42 0.74 16 31 H 0.06 0.86 8.14 -51.93 -0.42 0.43 16 32 H 0.05 1.09 3.34 -51.93 -0.17 0.91 16 33 H 0.06 1.18 8.14 -51.93 -0.42 0.76 16 34 H 0.26 7.50 8.31 -40.82 -0.34 7.17 16 35 H 0.04 0.70 7.34 -51.93 -0.38 0.32 16 36 H 0.07 1.40 8.10 -51.93 -0.42 0.98 16 LS Contribution 310.88 15.07 4.68 4.68 Total: -1.00 -30.69 310.88 -7.88 -38.58 By element: Atomic # 1 Polarization: 0.79 SS G_CDS: -4.25 Total: -3.45 kcal Atomic # 6 Polarization: -9.88 SS G_CDS: -3.60 Total: -13.48 kcal Atomic # 7 Polarization: -42.88 SS G_CDS: 0.87 Total: -42.01 kcal Atomic # 14 Polarization: 21.87 SS G_CDS: -4.14 Total: 17.73 kcal Atomic # 17 Polarization: -0.60 SS G_CDS: -1.45 Total: -2.06 kcal Total LS contribution 4.68 Total: 4.68 kcal Total: -30.69 -7.88 -38.58 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000596322177.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 94.467 kcal (2) G-P(sol) polarization free energy of solvation -30.695 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 63.772 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.885 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.580 kcal (6) G-S(sol) free energy of system = (1) + (5) 55.887 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds