Wall clock time and date at job start Tue Mar 31 2020 06:21:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13597 * 1 3 3 C 1.43203 * 179.97438 * 2 1 4 4 C 1.39759 * 120.19929 * 169.97199 * 3 2 1 5 5 C 1.37782 * 119.94037 * 179.97438 * 4 3 2 6 6 C 1.38575 * 120.35430 * 0.02562 * 5 4 3 7 7 C 1.38101 * 120.40826 * 359.97438 * 6 5 4 8 8 Cl 1.73602 * 119.97547 * 179.97438 * 7 6 5 9 9 C 1.38992 * 120.05203 * 359.97438 * 7 6 5 10 10 N 1.39098 * 120.17673 * 180.02562 * 9 7 6 11 11 C 1.46847 * 111.00073 * 118.97705 * 10 9 7 12 12 C 1.53035 * 109.52143 * 185.83649 * 11 10 9 13 13 C 1.53108 * 109.27978 * 300.81939 * 12 11 10 14 14 C 1.53117 * 109.16167 * 57.65604 * 13 12 11 15 15 H 1.09004 * 109.50223 * 62.28394 * 14 13 12 16 16 C 1.50703 * 109.53777 * 182.38333 * 14 13 12 17 17 H 1.08000 * 119.99656 * 119.82486 * 16 14 13 18 18 C 1.37874 * 120.00001 * 299.82237 * 16 14 13 19 19 N 1.31515 * 120.00223 * 0.02562 * 18 16 14 20 20 Si 1.86800 * 120.00071 * 179.97438 * 18 16 14 21 21 H 1.48505 * 109.46848 * 60.00556 * 20 18 16 22 22 H 1.48500 * 109.47200 * 180.02562 * 20 18 16 23 23 H 1.48494 * 109.47212 * 300.00357 * 20 18 16 24 24 C 1.46850 * 110.99555 * 243.18593 * 10 9 7 25 25 H 1.07997 * 120.02810 * 359.95647 * 4 3 2 26 26 H 1.07995 * 119.82526 * 180.02562 * 5 4 3 27 27 H 1.07996 * 119.79967 * 179.70343 * 6 5 4 28 28 H 1.08998 * 109.45974 * 305.85524 * 11 10 9 29 29 H 1.08995 * 109.46399 * 65.82198 * 11 10 9 30 30 H 1.09000 * 109.50187 * 180.87902 * 12 11 10 31 31 H 1.09003 * 109.50255 * 60.76575 * 12 11 10 32 32 H 1.09002 * 109.52831 * 297.74903 * 13 12 11 33 33 H 1.09007 * 109.52395 * 177.55923 * 13 12 11 34 34 H 0.96999 * 120.00480 * 180.02562 * 19 18 16 35 35 H 1.08992 * 109.46168 * 294.17640 * 24 10 9 36 36 H 1.08993 * 109.46113 * 54.14825 * 24 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2705 1.1904 -0.2103 5 6 4.6483 1.1850 -0.2087 6 6 5.3437 0.0047 0.0001 7 6 4.6642 -1.1793 0.2094 8 17 5.5467 -2.6515 0.4691 9 6 3.2744 -1.1931 0.2122 10 7 2.5874 -2.3840 0.4233 11 6 1.7504 -2.3025 1.6271 12 6 1.1254 -3.6706 1.9090 13 6 0.2809 -4.0983 0.7056 14 6 1.1656 -4.1285 -0.5438 15 1 1.9553 -4.8683 -0.4128 16 6 0.3301 -4.4918 -1.7443 17 1 0.2516 -3.8061 -2.5750 18 6 -0.3340 -5.6995 -1.7820 19 7 -0.2388 -6.5342 -0.7702 20 14 -1.3702 -6.1495 -3.2697 21 1 -0.5121 -6.1740 -4.4815 22 1 -1.9756 -7.4898 -3.0642 23 1 -2.4470 -5.1423 -3.4459 24 6 1.7894 -2.7470 -0.7548 25 1 2.7338 2.1131 -0.3743 26 1 5.1892 2.1055 -0.3710 27 1 6.4236 0.0099 -0.0053 28 1 2.3639 -2.0015 2.4763 29 1 0.9606 -1.5676 1.4712 30 1 0.4918 -3.6060 2.7936 31 1 1.9145 -4.4032 2.0787 32 1 -0.5317 -3.3867 0.5594 33 1 -0.1311 -5.0916 0.8842 34 1 -0.7057 -7.3840 -0.7969 35 1 0.9996 -2.0101 -0.8995 36 1 2.4313 -2.7690 -1.6354 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000596331476.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:21:08 Heat of formation + Delta-G solvation = 56.686655 kcal Electronic energy + Delta-G solvation = -20897.046826 eV Core-core repulsion = 17793.110621 eV Total energy + Delta-G solvation = -3103.936205 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 290.088 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -40.46862 -37.72448 -36.52200 -35.99568 -33.96941 -32.06271 -31.19850 -29.99768 -29.01148 -25.00207 -24.61347 -23.24911 -21.72186 -21.36345 -19.06744 -18.72605 -16.97370 -16.03371 -15.95279 -15.25295 -14.78049 -14.52213 -14.29901 -14.14415 -13.65810 -13.20254 -13.02432 -12.73491 -12.60896 -12.42243 -12.34550 -12.00267 -11.82764 -11.68502 -11.32641 -10.92729 -10.77781 -10.73018 -10.66129 -10.16403 -9.89720 -9.54439 -9.20431 -8.99273 -8.82299 -8.61656 -8.32529 -8.02329 -5.97533 -4.03638 0.56204 1.00008 2.21694 2.80609 2.85678 3.33527 3.37739 3.40676 3.69371 3.84454 4.01665 4.46765 4.67861 4.82575 5.01691 5.21700 5.32973 5.35051 5.58702 5.61958 5.86418 5.91863 5.98391 6.04803 6.12405 6.28837 6.37282 6.41735 6.62827 6.68097 6.88100 7.10723 7.33187 7.42577 7.55574 7.68909 7.75542 8.04640 8.13979 8.44794 8.98824 9.60557 11.08579 Molecular weight = 290.09amu Principal moments of inertia in cm(-1) A = 0.018551 B = 0.005428 C = 0.005004 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1508.986873 B = 5156.843830 C = 5593.893191 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.396 5.396 2 C 0.249 3.751 3 C -0.055 4.055 4 C -0.063 4.063 5 C -0.121 4.121 6 C -0.082 4.082 7 C -0.022 4.022 8 Cl -0.039 7.039 9 C 0.163 3.837 10 N -0.502 5.502 11 C 0.061 3.939 12 C -0.115 4.115 13 C -0.112 4.112 14 C 0.060 3.940 15 H 0.038 0.962 16 C -0.515 4.515 17 H 0.052 0.948 18 C 0.066 3.934 19 N -0.887 5.887 20 Si 0.890 3.110 21 H -0.277 1.277 22 H -0.287 1.287 23 H -0.278 1.278 24 C 0.067 3.933 25 H 0.135 0.865 26 H 0.140 0.860 27 H 0.140 0.860 28 H 0.064 0.936 29 H 0.033 0.967 30 H 0.050 0.950 31 H 0.065 0.935 32 H 0.030 0.970 33 H 0.093 0.907 34 H 0.261 0.739 35 H 0.030 0.970 36 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 12.314 14.034 4.093 19.114 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.071 5.071 2 C -0.066 4.066 3 C -0.061 4.061 4 C -0.084 4.084 5 C -0.139 4.139 6 C -0.102 4.102 7 C -0.050 4.050 8 Cl -0.010 7.010 9 C 0.064 3.936 10 N -0.223 5.223 11 C -0.065 4.065 12 C -0.153 4.153 13 C -0.150 4.150 14 C 0.041 3.959 15 H 0.057 0.943 16 C -0.554 4.554 17 H 0.070 0.930 18 C -0.136 4.136 19 N -0.526 5.526 20 Si 0.718 3.282 21 H -0.202 1.202 22 H -0.212 1.212 23 H -0.204 1.204 24 C -0.058 4.058 25 H 0.153 0.847 26 H 0.157 0.843 27 H 0.158 0.842 28 H 0.082 0.918 29 H 0.051 0.949 30 H 0.069 0.931 31 H 0.084 0.916 32 H 0.049 0.951 33 H 0.112 0.888 34 H 0.070 0.930 35 H 0.048 0.952 36 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 10.871 13.307 4.256 17.702 hybrid contribution -0.690 0.230 -0.941 1.189 sum 10.182 13.537 3.315 17.260 Atomic orbital electron populations 1.81307 1.11621 1.06720 1.07501 1.25270 0.92507 0.94198 0.94602 1.16759 0.85385 0.95520 1.08422 1.21142 0.94375 0.96385 0.96525 1.20955 0.93367 0.98126 1.01502 1.21237 1.00830 0.90612 0.97497 1.20805 0.90610 0.89096 1.04494 1.98391 1.73965 1.34058 1.94592 1.18861 0.91909 0.88835 0.93978 1.59666 1.31195 1.25465 1.06019 1.22247 0.94405 0.99240 0.90646 1.21662 0.99430 0.94821 0.99343 1.21673 0.97197 1.02479 0.93629 1.18639 0.94325 0.89273 0.93637 0.94339 1.21040 1.29452 1.02413 1.02499 0.92989 1.24894 0.96445 0.96235 0.96019 1.69871 1.43144 1.09376 1.30194 0.86690 0.80645 0.77521 0.83346 1.20244 1.21239 1.20391 1.22571 0.93887 1.00478 0.88832 0.84749 0.84257 0.84181 0.91786 0.94864 0.93113 0.91580 0.95093 0.88825 0.92954 0.95178 0.91718 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.40 -7.46 17.79 41.84 0.74 -6.72 16 2 C 0.25 4.11 10.14 -22.47 -0.23 3.89 16 3 C -0.05 -0.76 5.51 -106.62 -0.59 -1.34 16 4 C -0.06 -0.62 9.75 -39.18 -0.38 -1.00 16 5 C -0.12 -0.96 10.02 -39.62 -0.40 -1.35 16 6 C -0.08 -0.76 9.81 -39.51 -0.39 -1.15 16 7 C -0.02 -0.28 6.33 -39.35 -0.25 -0.53 16 8 Cl -0.04 -0.54 28.43 -51.86 -1.47 -2.01 16 9 C 0.16 2.47 4.68 -83.50 -0.39 2.08 16 10 N -0.50 -9.15 3.99 -170.87 -0.68 -9.83 16 11 C 0.06 1.09 5.03 -3.83 -0.02 1.07 16 12 C -0.11 -2.27 6.09 -26.66 -0.16 -2.43 16 13 C -0.11 -2.69 5.03 -26.61 -0.13 -2.83 16 14 C 0.06 1.51 2.26 -91.69 -0.21 1.30 16 15 H 0.04 1.06 8.14 -51.93 -0.42 0.64 16 16 C -0.52 -14.33 8.56 -34.44 -0.29 -14.63 16 17 H 0.05 1.44 7.74 -52.49 -0.41 1.04 16 18 C 0.07 1.83 5.31 -17.82 -0.09 1.74 16 19 N -0.89 -25.44 11.36 55.43 0.63 -24.81 16 20 Si 0.89 21.66 29.54 -169.99 -5.02 16.64 16 21 H -0.28 -6.65 7.11 56.52 0.40 -6.24 16 22 H -0.29 -6.89 7.11 56.52 0.40 -6.49 16 23 H -0.28 -6.78 7.11 56.52 0.40 -6.38 16 24 C 0.07 1.44 4.29 -3.83 -0.02 1.42 16 25 H 0.13 1.01 8.06 -52.49 -0.42 0.59 16 26 H 0.14 0.64 8.06 -52.49 -0.42 0.22 16 27 H 0.14 0.94 8.06 -52.49 -0.42 0.52 16 28 H 0.06 1.01 8.10 -51.93 -0.42 0.59 16 29 H 0.03 0.62 5.16 -51.93 -0.27 0.36 16 30 H 0.05 0.91 8.14 -51.93 -0.42 0.49 16 31 H 0.07 1.32 8.14 -51.93 -0.42 0.90 16 32 H 0.03 0.77 8.14 -51.93 -0.42 0.35 16 33 H 0.09 2.50 6.17 -51.92 -0.32 2.18 16 34 H 0.26 7.16 8.31 -40.82 -0.34 6.82 16 35 H 0.03 0.67 5.40 -51.93 -0.28 0.39 16 36 H 0.06 1.39 8.10 -51.93 -0.42 0.97 16 LS Contribution 310.98 15.07 4.69 4.69 Total: -1.00 -29.99 310.98 -8.88 -38.87 By element: Atomic # 1 Polarization: 1.14 SS G_CDS: -4.21 Total: -3.07 kcal Atomic # 6 Polarization: -10.20 SS G_CDS: -3.55 Total: -13.76 kcal Atomic # 7 Polarization: -42.05 SS G_CDS: 0.69 Total: -41.36 kcal Atomic # 14 Polarization: 21.66 SS G_CDS: -5.02 Total: 16.64 kcal Atomic # 17 Polarization: -0.54 SS G_CDS: -1.47 Total: -2.01 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -29.99 -8.88 -38.87 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000596331476.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.557 kcal (2) G-P(sol) polarization free energy of solvation -29.991 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 65.566 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.880 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.871 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.687 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds