Wall clock time and date at job start Tue Mar 31 2020 06:11:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13594 * 1 3 3 C 1.43208 * 179.97438 * 2 1 4 4 C 1.39687 * 120.00301 * 184.09405 * 3 2 1 5 5 C 1.37710 * 119.99820 * 180.02562 * 4 3 2 6 6 C 1.39650 * 120.00083 * 0.02562 * 5 4 3 7 7 C 1.47856 * 119.99770 * 179.97438 * 6 5 4 8 8 O 1.21560 * 119.99667 * 359.97438 * 7 6 5 9 9 N 1.34772 * 120.00225 * 180.02562 * 7 6 5 10 10 C 1.39110 * 119.99851 * 183.04038 * 9 7 6 11 11 C 1.39515 * 119.83585 * 141.95577 * 10 9 7 12 12 C 1.36356 * 120.16753 * 179.76061 * 11 10 9 13 13 C 1.40891 * 119.82776 * 0.51101 * 12 11 10 14 14 C 1.41123 * 120.16279 * 179.72097 * 13 12 11 15 15 H 1.07994 * 120.00063 * 158.00220 * 14 13 12 16 16 C 1.39925 * 119.99552 * 338.00112 * 14 13 12 17 17 N 1.30856 * 120.00071 * 327.54224 * 16 14 13 18 18 Si 1.86799 * 119.99529 * 147.54424 * 16 14 13 19 19 H 1.48508 * 109.47066 * 94.98472 * 18 16 14 20 20 H 1.48500 * 109.47317 * 214.98335 * 18 16 14 21 21 H 1.48494 * 109.47524 * 334.98804 * 18 16 14 22 22 C 1.40889 * 119.67522 * 359.74251 * 13 12 11 23 23 C 1.36346 * 119.83274 * 359.97438 * 22 13 12 24 24 C 1.39657 * 120.01190 * 0.25279 * 6 5 4 25 25 C 1.37721 * 119.99858 * 359.49162 * 24 6 5 26 26 H 1.08007 * 119.99955 * 0.02562 * 4 3 2 27 27 H 1.07998 * 119.99468 * 179.97438 * 5 4 3 28 28 H 0.96997 * 119.99833 * 3.31144 * 9 7 6 29 29 H 1.08000 * 119.91836 * 0.02562 * 11 10 9 30 30 H 1.07996 * 120.08813 * 180.23451 * 12 11 10 31 31 H 0.97005 * 119.99825 * 180.02562 * 17 16 14 32 32 H 1.08006 * 120.08255 * 179.97438 * 22 13 12 33 33 H 1.08006 * 119.91762 * 179.97438 * 23 22 13 34 34 H 1.07999 * 120.00655 * 179.72176 * 24 6 5 35 35 H 1.07996 * 119.99946 * 180.25658 * 25 24 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2660 1.2076 0.0864 5 6 4.6431 1.2081 0.0858 6 6 5.3418 0.0021 -0.0016 7 6 6.8204 0.0028 -0.0027 8 8 7.4276 1.0532 0.0719 9 7 7.4947 -1.1610 -0.0876 10 6 8.8844 -1.1657 -0.0250 11 6 9.5452 -2.1900 0.6535 12 6 10.9073 -2.2040 0.7150 13 6 11.6471 -1.1746 0.1001 14 6 13.0569 -1.1788 0.1644 15 1 13.6324 -0.6324 -0.5680 16 6 13.7088 -1.8910 1.1771 17 7 13.1532 -2.0088 2.3560 18 14 15.3724 -2.6735 0.8462 19 1 16.4497 -1.7519 1.2882 20 1 15.4761 -3.9516 1.5952 21 1 15.5141 -2.9391 -0.6080 22 6 10.9725 -0.1406 -0.5787 23 6 9.6103 -0.1432 -0.6367 24 6 4.6442 -1.2042 -0.0938 25 6 3.2670 -1.2055 -0.0880 26 1 2.7256 2.1403 0.1536 27 1 5.1826 2.1413 0.1522 28 1 7.0113 -1.9948 -0.1963 29 1 8.9766 -2.9763 1.1278 30 1 11.4176 -2.9996 1.2374 31 1 13.6053 -2.5022 3.0582 32 1 11.5331 0.6520 -1.0521 33 1 9.0918 0.6490 -1.1565 34 1 5.1847 -2.1365 -0.1660 35 1 2.7276 -2.1387 -0.1551 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000015028907.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:11:54 Heat of formation + Delta-G solvation = 41.827768 kcal Electronic energy + Delta-G solvation = -20634.431528 eV Core-core repulsion = 17369.139270 eV Total energy + Delta-G solvation = -3265.292258 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 292.095 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -40.38743 -38.94679 -37.29219 -36.57895 -34.61715 -33.25232 -31.79851 -31.42281 -29.62362 -29.01997 -25.82114 -24.34629 -22.98495 -21.80648 -20.90106 -20.03899 -19.26364 -17.84529 -17.38087 -16.52979 -15.55022 -15.26355 -15.05379 -14.80818 -14.62248 -14.26590 -14.03823 -13.93916 -13.57757 -13.22926 -13.07530 -12.73968 -12.45225 -12.37643 -12.12064 -12.05143 -11.48153 -11.32574 -11.20368 -11.10879 -10.76984 -10.19196 -9.72151 -9.49277 -9.43555 -9.25862 -9.12954 -8.92897 -7.61159 -7.22098 -6.92554 -4.33651 0.13268 0.96971 2.27850 2.30791 2.65952 2.98400 3.01821 3.05422 3.11229 3.28350 3.46717 3.55898 3.77960 3.84346 4.42147 4.45276 4.47856 4.77551 4.93054 5.09243 5.27777 5.57257 5.60276 5.78589 5.87817 6.02712 6.13103 6.35695 6.37521 6.69166 6.88826 6.94024 7.07114 7.11067 7.21822 7.49746 7.61352 7.81296 7.95672 8.17409 8.19884 8.48158 8.64174 8.77506 8.92446 9.95814 Molecular weight = 292.10amu Principal moments of inertia in cm(-1) A = 0.050737 B = 0.002628 C = 0.002559 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 551.732969 B =10650.741736 C =10939.111528 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.417 5.417 2 C 0.256 3.744 3 C -0.017 4.017 4 C -0.076 4.076 5 C -0.065 4.065 6 C -0.088 4.088 7 C 0.532 3.468 8 O -0.523 6.523 9 N -0.636 5.636 10 C -0.029 4.029 11 C -0.098 4.098 12 C -0.173 4.173 13 C 0.113 3.887 14 C -0.462 4.462 15 H 0.083 0.917 16 C 0.087 3.913 17 N -0.765 5.765 18 Si 0.897 3.103 19 H -0.269 1.269 20 H -0.274 1.274 21 H -0.257 1.257 22 C -0.225 4.225 23 C -0.062 4.062 24 C -0.093 4.093 25 C -0.076 4.076 26 H 0.139 0.861 27 H 0.149 0.851 28 H 0.394 0.606 29 H 0.090 0.910 30 H 0.108 0.892 31 H 0.284 0.716 32 H 0.095 0.905 33 H 0.103 0.897 34 H 0.138 0.862 35 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.015 -1.113 -2.857 13.371 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.092 5.092 2 C -0.059 4.059 3 C -0.021 4.021 4 C -0.097 4.097 5 C -0.084 4.084 6 C -0.092 4.092 7 C 0.319 3.681 8 O -0.401 6.401 9 N -0.279 5.279 10 C -0.121 4.121 11 C -0.118 4.118 12 C -0.192 4.192 13 C 0.110 3.890 14 C -0.489 4.489 15 H 0.101 0.899 16 C -0.136 4.136 17 N -0.387 5.387 18 Si 0.720 3.280 19 H -0.194 1.194 20 H -0.198 1.198 21 H -0.180 1.180 22 C -0.245 4.245 23 C -0.082 4.082 24 C -0.112 4.112 25 C -0.096 4.096 26 H 0.156 0.844 27 H 0.166 0.834 28 H 0.228 0.772 29 H 0.108 0.892 30 H 0.126 0.874 31 H 0.095 0.905 32 H 0.113 0.887 33 H 0.121 0.879 34 H 0.156 0.844 35 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -14.315 -0.448 -2.534 14.545 hybrid contribution 0.916 -0.855 0.079 1.255 sum -13.399 -1.303 -2.456 13.684 Atomic orbital electron populations 1.81265 1.12065 1.07266 1.08637 1.25718 0.92648 0.93797 0.93770 1.16125 0.84282 0.95197 1.06507 1.21163 0.93977 0.96845 0.97668 1.21265 0.93021 0.98584 0.95564 1.20446 0.94082 0.94236 1.00449 1.18220 0.86341 0.84775 0.78780 1.90790 1.69100 1.31009 1.49190 1.42817 1.06491 1.08244 1.70333 1.17005 0.79774 1.03293 1.12067 1.20164 0.95005 0.97697 0.98969 1.20619 0.91991 1.00404 1.06226 1.17613 0.93181 0.89258 0.88906 1.19541 0.91786 1.27053 1.10529 0.89894 1.25975 0.99965 0.93969 0.93656 1.69949 1.39072 1.28330 1.01360 0.86485 0.81702 0.79312 0.80462 1.19413 1.19849 1.18044 1.20585 0.93045 1.00446 1.10393 1.20296 0.93890 0.96619 0.97394 1.21307 0.93758 0.97834 0.98272 1.21086 0.93937 0.96851 0.97726 0.84356 0.83377 0.77165 0.89193 0.87429 0.90472 0.88656 0.87919 0.84393 0.84417 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.42 -4.91 18.54 41.84 0.78 -4.14 16 2 C 0.26 2.43 15.32 -22.47 -0.34 2.09 16 3 C -0.02 -0.14 5.73 -106.89 -0.61 -0.75 16 4 C -0.08 -0.60 9.73 -39.23 -0.38 -0.99 16 5 C -0.07 -0.66 9.58 -39.25 -0.38 -1.04 16 6 C -0.09 -1.01 5.88 -104.90 -0.62 -1.63 16 7 C 0.53 8.64 7.58 -12.33 -0.09 8.55 16 8 O -0.52 -10.65 13.95 5.31 0.07 -10.57 16 9 N -0.64 -10.35 5.24 -10.59 -0.06 -10.41 16 10 C -0.03 -0.62 6.25 -83.60 -0.52 -1.14 16 11 C -0.10 -2.14 9.90 -39.78 -0.39 -2.53 16 12 C -0.17 -4.24 8.74 -39.26 -0.34 -4.59 16 13 C 0.11 2.93 5.57 -106.80 -0.60 2.33 16 14 C -0.46 -11.82 8.94 -37.86 -0.34 -12.16 16 15 H 0.08 2.05 8.02 -52.49 -0.42 1.63 16 16 C 0.09 2.08 4.77 -17.34 -0.08 2.00 16 17 N -0.76 -18.93 11.78 55.55 0.65 -18.27 16 18 Si 0.90 17.60 29.66 -169.99 -5.04 12.56 16 19 H -0.27 -5.21 7.11 56.52 0.40 -4.81 16 20 H -0.27 -5.23 7.11 56.52 0.40 -4.83 16 21 H -0.26 -5.04 7.11 56.52 0.40 -4.64 16 22 C -0.22 -5.53 9.74 -39.26 -0.38 -5.91 16 23 C -0.06 -1.44 8.59 -39.79 -0.34 -1.78 16 24 C -0.09 -0.78 9.52 -39.24 -0.37 -1.15 16 25 C -0.08 -0.54 9.73 -39.23 -0.38 -0.93 16 26 H 0.14 0.81 8.06 -52.48 -0.42 0.38 16 27 H 0.15 1.53 7.64 -52.49 -0.40 1.13 16 28 H 0.39 4.78 6.85 -40.82 -0.28 4.50 16 29 H 0.09 1.68 8.06 -52.49 -0.42 1.26 16 30 H 0.11 2.68 6.52 -52.49 -0.34 2.34 16 31 H 0.28 6.31 8.30 -40.82 -0.34 5.97 16 32 H 0.10 2.23 8.06 -52.48 -0.42 1.81 16 33 H 0.10 2.32 6.45 -52.48 -0.34 1.98 16 34 H 0.14 0.88 6.39 -52.49 -0.34 0.54 16 35 H 0.14 0.68 8.06 -52.49 -0.42 0.26 16 LS Contribution 318.45 15.07 4.80 4.80 Total: -1.00 -30.21 318.45 -7.92 -38.13 By element: Atomic # 1 Polarization: 10.48 SS G_CDS: -2.94 Total: 7.54 kcal Atomic # 6 Polarization: -13.45 SS G_CDS: -6.18 Total: -19.63 kcal Atomic # 7 Polarization: -34.19 SS G_CDS: 1.37 Total: -32.82 kcal Atomic # 8 Polarization: -10.65 SS G_CDS: 0.07 Total: -10.57 kcal Atomic # 14 Polarization: 17.60 SS G_CDS: -5.04 Total: 12.56 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -30.21 -7.92 -38.13 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000015028907.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.955 kcal (2) G-P(sol) polarization free energy of solvation -30.210 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.745 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.917 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.128 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.828 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds