Wall clock time and date at job start Tue Mar 31 2020 07:04:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.47195 * 179.97438 * 2 1 4 4 C 1.52996 * 109.47416 * 92.12919 * 3 2 1 5 5 N 1.46505 * 109.47237 * 185.41945 * 4 3 2 6 6 C 1.46501 * 119.99554 * 277.95457 * 5 4 3 7 7 C 1.50694 * 109.47294 * 270.00013 * 6 5 4 8 8 H 1.07999 * 120.00205 * 0.02562 * 7 6 5 9 9 C 1.37877 * 119.99867 * 180.02562 * 7 6 5 10 10 N 1.31516 * 119.99975 * 0.02562 * 9 7 6 11 11 Si 1.86798 * 120.00094 * 179.97438 * 9 7 6 12 12 H 1.48506 * 109.47092 * 60.00040 * 11 9 7 13 13 H 1.48498 * 109.47557 * 180.02562 * 11 9 7 14 14 H 1.48498 * 109.47322 * 300.00347 * 11 9 7 15 15 C 1.34768 * 120.00091 * 97.96004 * 5 4 3 16 16 O 1.21561 * 120.00326 * 185.83040 * 15 5 4 17 17 C 1.47791 * 120.00093 * 5.82910 * 15 5 4 18 18 C 1.40084 * 120.54296 * 315.03530 * 17 15 5 19 19 C 1.38254 * 118.30376 * 179.97438 * 18 17 15 20 20 C 1.38546 * 119.29533 * 359.97438 * 19 18 17 21 21 Cl 1.73601 * 119.47664 * 180.02562 * 20 19 18 22 22 N 1.32038 * 121.04730 * 0.27735 * 20 19 18 23 23 C 1.31688 * 121.85954 * 359.43362 * 22 20 19 24 24 H 1.09004 * 109.47665 * 332.12429 * 3 2 1 25 25 H 1.09003 * 109.46640 * 212.12802 * 3 2 1 26 26 H 1.08997 * 109.47180 * 65.41769 * 4 3 2 27 27 H 1.08997 * 109.46750 * 305.41561 * 4 3 2 28 28 H 1.08998 * 109.46986 * 30.00881 * 6 5 4 29 29 H 1.09004 * 109.46537 * 150.00268 * 6 5 4 30 30 H 0.97006 * 119.99922 * 179.97438 * 10 9 7 31 31 H 1.08000 * 120.84913 * 359.95434 * 18 17 15 32 32 H 1.08004 * 120.35389 * 180.02562 * 19 18 17 33 33 H 1.08002 * 119.71138 * 180.31185 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1180 0.0545 -1.4414 5 7 4.5773 -0.0752 -1.4483 6 6 5.4179 1.0967 -1.1905 7 6 5.7255 1.7904 -2.4924 8 1 5.3338 1.3980 -3.4192 9 6 6.5072 2.9261 -2.5005 10 7 6.9848 3.4037 -1.3720 11 14 6.8892 3.7857 -4.1143 12 1 5.6221 4.2178 -4.7571 13 1 7.7422 4.9729 -3.8532 14 1 7.6074 2.8495 -5.0160 15 6 5.1463 -1.2723 -1.6918 16 8 6.3507 -1.4041 -1.5934 17 6 4.3060 -2.4250 -2.0785 18 6 3.1148 -2.6989 -1.3942 19 6 2.3643 -3.7886 -1.7950 20 6 2.8097 -4.5672 -2.8509 21 17 1.8707 -5.9362 -3.3585 22 7 3.9397 -4.2873 -3.4740 23 6 4.6854 -3.2572 -3.1320 24 1 2.9718 -0.9076 0.4805 25 1 2.9708 0.8712 0.5466 26 1 2.8357 1.0062 -1.8914 27 1 2.6780 -0.7626 -2.0132 28 1 4.8906 1.7835 -0.5285 29 1 6.3482 0.7797 -0.7190 30 1 7.5351 4.2026 -1.3777 31 1 2.7911 -2.0749 -0.5743 32 1 1.4401 -4.0299 -1.2909 33 1 5.6010 -3.0575 -3.6690 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000037981347.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:04:51 Heat of formation + Delta-G solvation = 32.633414 kcal Electronic energy + Delta-G solvation = -20450.673966 eV Core-core repulsion = 17117.124250 eV Total energy + Delta-G solvation = -3333.549716 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 293.067 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -40.83700 -38.91266 -37.09444 -36.83102 -35.52110 -33.37942 -32.55286 -31.34793 -31.07331 -27.56929 -24.76179 -24.18013 -23.92480 -22.60966 -19.36501 -18.06116 -17.64458 -17.11561 -16.68064 -16.53881 -15.78492 -15.15044 -14.79526 -14.70847 -14.33875 -14.23128 -13.77018 -13.39654 -13.26120 -12.77529 -12.48046 -12.45938 -12.17631 -11.91094 -11.86770 -11.55891 -11.36637 -11.18773 -11.04710 -10.71736 -10.29621 -10.14150 -9.99911 -9.83550 -9.36912 -9.09904 -8.55445 -8.05184 -6.17940 -4.23599 0.47087 0.88408 1.54810 2.57719 2.66910 2.95818 3.25403 3.29745 3.30870 3.37707 3.56532 3.97591 4.22058 4.34019 4.47100 4.58837 4.66056 4.81888 4.91746 4.96861 5.17830 5.20931 5.38161 5.55219 5.66740 5.74204 5.93597 6.17226 6.74999 7.17579 7.26814 7.42966 7.44786 7.77046 8.00307 8.05196 8.58012 8.81551 9.42628 10.90102 Molecular weight = 293.07amu Principal moments of inertia in cm(-1) A = 0.015702 B = 0.004586 C = 0.003894 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1782.786979 B = 6103.758838 C = 7189.305379 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.435 5.435 2 C 0.212 3.788 3 C -0.057 4.057 4 C 0.105 3.895 5 N -0.585 5.585 6 C 0.244 3.756 7 C -0.535 4.535 8 H 0.059 0.941 9 C 0.066 3.934 10 N -0.892 5.892 11 Si 0.898 3.102 12 H -0.276 1.276 13 H -0.286 1.286 14 H -0.275 1.275 15 C 0.555 3.445 16 O -0.517 6.517 17 C -0.163 4.163 18 C -0.051 4.051 19 C -0.159 4.159 20 C 0.184 3.816 21 Cl -0.033 7.033 22 N -0.479 5.479 23 C 0.169 3.831 24 H 0.110 0.890 25 H 0.126 0.874 26 H 0.098 0.902 27 H 0.081 0.919 28 H 0.039 0.961 29 H 0.051 0.949 30 H 0.266 0.734 31 H 0.155 0.845 32 H 0.149 0.851 33 H 0.177 0.823 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.592 -11.934 1.435 15.378 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.112 5.112 2 C -0.107 4.107 3 C -0.098 4.098 4 C -0.021 4.021 5 N -0.316 5.316 6 C 0.126 3.874 7 C -0.574 4.574 8 H 0.077 0.923 9 C -0.137 4.137 10 N -0.530 5.530 11 Si 0.725 3.275 12 H -0.202 1.202 13 H -0.211 1.211 14 H -0.201 1.201 15 C 0.340 3.660 16 O -0.394 6.394 17 C -0.169 4.169 18 C -0.077 4.077 19 C -0.180 4.180 20 C 0.020 3.980 21 Cl -0.004 7.004 22 N -0.189 5.189 23 C 0.012 3.988 24 H 0.128 0.872 25 H 0.143 0.857 26 H 0.117 0.883 27 H 0.099 0.901 28 H 0.057 0.943 29 H 0.069 0.931 30 H 0.075 0.925 31 H 0.173 0.827 32 H 0.167 0.833 33 H 0.194 0.806 Dipole moment (debyes) X Y Z Total from point charges -10.318 -12.473 0.843 16.209 hybrid contribution 0.254 0.968 -0.262 1.034 sum -10.064 -11.505 0.581 15.297 Atomic orbital electron populations 1.81233 1.12835 1.08878 1.08273 1.29008 0.95002 0.93232 0.93423 1.20014 0.81642 1.06615 1.01532 1.21577 0.82298 1.04952 0.93273 1.48153 1.05491 1.09816 1.68112 1.19455 0.90581 0.80187 0.97224 1.21349 1.32522 1.10233 0.93293 0.92288 1.24899 0.95273 0.96942 0.96631 1.69902 1.34293 1.23058 1.25728 0.86563 0.78422 0.78944 0.83563 1.20192 1.21131 1.20085 1.17852 0.87293 0.82180 0.78638 1.90821 1.13939 1.83392 1.51201 1.21404 0.96752 0.99348 0.99348 1.22230 0.91823 0.95167 0.98452 1.21767 1.02492 0.95897 0.97869 1.21837 0.91965 0.91089 0.93144 1.98409 1.69170 1.41802 1.91027 1.67088 1.04642 1.18214 1.28964 1.22870 0.97138 0.86564 0.92265 0.87230 0.85650 0.88330 0.90111 0.94289 0.93065 0.92468 0.82749 0.83314 0.80621 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.44 -5.80 18.54 42.15 0.78 -5.02 16 2 C 0.21 2.27 15.35 -20.76 -0.32 1.95 16 3 C -0.06 -0.53 5.09 -29.52 -0.15 -0.68 16 4 C 0.11 1.30 4.84 -4.04 -0.02 1.28 16 5 N -0.59 -9.99 2.46 -176.20 -0.43 -10.42 16 6 C 0.24 5.39 5.22 -5.20 -0.03 5.36 16 7 C -0.54 -13.55 9.39 -34.44 -0.32 -13.88 16 8 H 0.06 1.49 7.81 -52.49 -0.41 1.08 16 9 C 0.07 1.72 5.46 -17.82 -0.10 1.62 16 10 N -0.89 -24.40 13.29 55.43 0.74 -23.66 16 11 Si 0.90 20.46 29.54 -169.99 -5.02 15.44 16 12 H -0.28 -6.16 7.11 56.52 0.40 -5.76 16 13 H -0.29 -6.48 7.11 56.52 0.40 -6.07 16 14 H -0.28 -6.33 7.11 56.52 0.40 -5.93 16 15 C 0.56 9.77 7.30 -12.36 -0.09 9.68 16 16 O -0.52 -11.35 16.55 5.31 0.09 -11.27 16 17 C -0.16 -2.26 5.11 -104.82 -0.54 -2.79 16 18 C -0.05 -0.55 7.53 -38.88 -0.29 -0.84 16 19 C -0.16 -1.61 9.86 -39.46 -0.39 -2.00 16 20 C 0.18 2.21 7.27 -17.35 -0.13 2.08 16 21 Cl -0.03 -0.34 29.10 -51.86 -1.51 -1.85 16 22 N -0.48 -6.58 10.32 -10.01 -0.10 -6.68 16 23 C 0.17 2.36 10.86 -17.14 -0.19 2.17 16 24 H 0.11 0.82 6.23 -51.93 -0.32 0.49 16 25 H 0.13 1.13 8.07 -51.93 -0.42 0.71 16 26 H 0.10 1.29 8.13 -51.93 -0.42 0.87 16 27 H 0.08 0.90 5.02 -51.93 -0.26 0.64 16 28 H 0.04 0.84 8.00 -51.93 -0.42 0.43 16 29 H 0.05 1.30 7.35 -51.93 -0.38 0.92 16 30 H 0.27 6.95 8.31 -40.82 -0.34 6.61 16 31 H 0.16 1.33 3.67 -52.49 -0.19 1.14 16 32 H 0.15 1.11 8.06 -52.48 -0.42 0.69 16 33 H 0.18 2.36 8.06 -52.49 -0.42 1.93 16 LS Contribution 313.10 15.07 4.72 4.72 Total: -1.00 -30.93 313.10 -6.10 -37.04 By element: Atomic # 1 Polarization: 0.56 SS G_CDS: -2.81 Total: -2.25 kcal Atomic # 6 Polarization: 6.53 SS G_CDS: -2.56 Total: 3.97 kcal Atomic # 7 Polarization: -46.77 SS G_CDS: 0.98 Total: -45.79 kcal Atomic # 8 Polarization: -11.35 SS G_CDS: 0.09 Total: -11.27 kcal Atomic # 14 Polarization: 20.46 SS G_CDS: -5.02 Total: 15.44 kcal Atomic # 17 Polarization: -0.34 SS G_CDS: -1.51 Total: -1.85 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -30.93 -6.10 -37.04 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000037981347.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 69.671 kcal (2) G-P(sol) polarization free energy of solvation -30.933 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.738 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.105 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.038 kcal (6) G-S(sol) free energy of system = (1) + (5) 32.633 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds