Wall clock time and date at job start Tue Mar 31 2020 07:04:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 C 1.52995 * 109.47325 * 113.44394 * 3 2 1 5 5 N 1.46500 * 109.47513 * 180.02562 * 4 3 2 6 6 C 1.46503 * 119.99851 * 262.94511 * 5 4 3 7 7 C 1.50698 * 109.46603 * 269.99629 * 6 5 4 8 8 H 1.08000 * 120.00644 * 359.97438 * 7 6 5 9 9 C 1.37884 * 119.99949 * 179.97438 * 7 6 5 10 10 N 1.31517 * 120.00397 * 179.97438 * 9 7 6 11 11 Si 1.86805 * 119.99687 * 0.02562 * 9 7 6 12 12 H 1.48498 * 109.46988 * 90.00147 * 11 9 7 13 13 H 1.48498 * 109.46862 * 209.99796 * 11 9 7 14 14 H 1.48492 * 109.47295 * 329.99668 * 11 9 7 15 15 C 1.34775 * 120.00340 * 82.93740 * 5 4 3 16 16 O 1.21511 * 120.00464 * 183.24299 * 15 5 4 17 17 C 1.48166 * 119.99786 * 3.24465 * 15 5 4 18 18 C 1.39269 * 119.71615 * 173.23972 * 17 15 5 19 19 C 1.38628 * 119.09094 * 180.25052 * 18 17 15 20 20 C 1.38562 * 118.50295 * 359.48136 * 19 18 17 21 21 C 1.38718 * 119.34344 * 0.27479 * 20 19 18 22 22 Cl 1.73605 * 119.56745 * 179.97438 * 21 20 19 23 23 N 1.31617 * 120.87102 * 359.97438 * 21 20 19 24 24 H 1.09001 * 109.46904 * 353.44403 * 3 2 1 25 25 H 1.08996 * 109.46994 * 233.44408 * 3 2 1 26 26 H 1.09000 * 109.47021 * 59.99597 * 4 3 2 27 27 H 1.09003 * 109.46848 * 300.00228 * 4 3 2 28 28 H 1.08997 * 109.47144 * 29.99205 * 6 5 4 29 29 H 1.08997 * 109.47300 * 149.99973 * 6 5 4 30 30 H 0.96993 * 120.00167 * 180.02562 * 10 9 7 31 31 H 1.08006 * 120.45495 * 0.02562 * 18 17 15 32 32 H 1.08003 * 120.74587 * 179.75536 * 19 18 17 33 33 H 1.08000 * 120.32436 * 180.25292 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1178 0.5748 -1.3234 5 7 4.5828 0.5749 -1.3236 6 6 5.3152 1.7921 -0.9656 7 6 5.5661 2.6104 -2.2060 8 1 5.2155 2.2588 -3.1650 9 6 6.2433 3.8081 -2.1164 10 7 6.4628 4.5221 -3.1989 11 14 6.8505 4.4159 -0.4576 12 1 8.2241 3.9061 -0.2162 13 1 6.8652 5.9008 -0.4498 14 1 5.9449 3.9242 0.6115 15 6 5.2567 -0.5448 -1.6531 16 8 6.4704 -0.5623 -1.5965 17 6 4.5177 -1.7544 -2.0844 18 6 5.2197 -2.8601 -2.5578 19 6 4.5150 -3.9831 -2.9629 20 6 3.1326 -3.9652 -2.8701 21 6 2.4985 -2.8313 -2.3840 22 17 0.7667 -2.8023 -2.2660 23 7 3.1924 -1.7769 -2.0111 24 1 2.9717 -1.0201 0.1173 25 1 2.9710 0.6129 0.8255 26 1 2.7539 1.5955 -1.4407 27 1 2.7547 -0.0375 -2.1489 28 1 4.7262 2.3758 -0.2583 29 1 6.2677 1.5221 -0.5097 30 1 6.9395 5.3644 -3.1359 31 1 6.2983 -2.8417 -2.6121 32 1 5.0321 -4.8539 -3.3380 33 1 2.5545 -4.8256 -3.1736 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000051073236.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:04:18 Heat of formation + Delta-G solvation = 46.523102 kcal Electronic energy + Delta-G solvation = -20813.070535 eV Core-core repulsion = 17480.123122 eV Total energy + Delta-G solvation = -3332.947414 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 293.067 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -40.85510 -38.75059 -36.83632 -36.70665 -35.39786 -33.18985 -32.52422 -31.31785 -30.89808 -28.08346 -25.01046 -23.85197 -23.66499 -22.30181 -19.57905 -17.65209 -17.33767 -17.12700 -16.78673 -16.22286 -15.55183 -15.25475 -15.13762 -14.59150 -14.31962 -13.83782 -13.72264 -13.41105 -13.08112 -12.54725 -12.45388 -12.28799 -12.17671 -11.88190 -11.67779 -11.54791 -11.45130 -11.04515 -10.93591 -10.57306 -10.26541 -10.17685 -9.91439 -9.56517 -9.19589 -9.13357 -8.63475 -7.91898 -6.12995 -4.13226 0.44678 0.82370 1.57976 2.81907 2.96364 3.02660 3.26632 3.31902 3.33636 3.43750 3.79642 4.02037 4.34638 4.35421 4.57118 4.69184 4.74327 5.03887 5.12313 5.20590 5.31489 5.40187 5.62238 5.68589 5.79591 6.03669 6.10091 6.45982 6.60433 6.82422 7.12456 7.32300 7.52584 7.78079 7.99458 8.37688 8.64779 8.90580 9.45806 11.00109 Molecular weight = 293.07amu Principal moments of inertia in cm(-1) A = 0.017832 B = 0.005346 C = 0.004483 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1569.863066 B = 5236.315674 C = 6244.736156 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.446 5.446 2 C 0.224 3.776 3 C -0.036 4.036 4 C 0.112 3.888 5 N -0.566 5.566 6 C 0.212 3.788 7 C -0.533 4.533 8 H 0.076 0.924 9 C 0.075 3.925 10 N -0.895 5.895 11 Si 0.875 3.125 12 H -0.273 1.273 13 H -0.285 1.285 14 H -0.264 1.264 15 C 0.561 3.439 16 O -0.523 6.523 17 C 0.111 3.889 18 C -0.110 4.110 19 C -0.067 4.067 20 C -0.141 4.141 21 C 0.164 3.836 22 Cl -0.027 7.027 23 N -0.448 5.448 24 H 0.103 0.897 25 H 0.104 0.896 26 H 0.086 0.914 27 H 0.114 0.886 28 H 0.037 0.963 29 H 0.042 0.958 30 H 0.265 0.735 31 H 0.157 0.843 32 H 0.151 0.849 33 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.346 -17.717 3.058 19.066 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.124 5.124 2 C -0.094 4.094 3 C -0.078 4.078 4 C -0.014 4.014 5 N -0.295 5.295 6 C 0.092 3.908 7 C -0.572 4.572 8 H 0.094 0.906 9 C -0.128 4.128 10 N -0.533 5.533 11 Si 0.702 3.298 12 H -0.198 1.198 13 H -0.211 1.211 14 H -0.189 1.189 15 C 0.346 3.654 16 O -0.399 6.399 17 C -0.027 4.027 18 C -0.131 4.131 19 C -0.093 4.093 20 C -0.162 4.162 21 C -0.002 4.002 22 Cl 0.002 6.998 23 N -0.163 5.163 24 H 0.121 0.879 25 H 0.122 0.878 26 H 0.105 0.895 27 H 0.131 0.869 28 H 0.055 0.945 29 H 0.060 0.940 30 H 0.075 0.925 31 H 0.175 0.825 32 H 0.168 0.832 33 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges -7.863 -16.747 3.369 18.805 hybrid contribution 0.944 -0.233 0.366 1.039 sum -6.919 -16.980 3.735 18.712 Atomic orbital electron populations 1.81147 1.12892 1.09404 1.08941 1.28924 0.94960 0.92666 0.92842 1.19670 0.81858 1.04599 1.01644 1.21833 0.80221 1.02693 0.96619 1.47784 1.06151 1.11400 1.64142 1.19858 0.92665 0.81084 0.97214 1.21282 1.37415 1.04331 0.94131 0.90579 1.24844 0.95145 0.96295 0.96544 1.69888 1.41149 1.14209 1.28021 0.86871 0.80160 0.78231 0.84577 1.19829 1.21060 1.18888 1.17675 0.86585 0.82097 0.79088 1.90789 1.12544 1.83033 1.53549 1.21538 0.87897 0.95699 0.97582 1.22263 1.03002 0.92029 0.95822 1.21629 0.93080 0.98532 0.96027 1.22001 0.95498 0.98385 1.00299 1.21844 0.87991 0.91466 0.98906 1.98442 1.06590 1.98346 1.96448 1.67624 1.07792 1.25168 1.15698 0.87938 0.87820 0.89549 0.86860 0.94525 0.93975 0.92459 0.82531 0.83155 0.83568 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.45 -7.06 18.54 42.15 0.78 -6.28 16 2 C 0.22 3.11 15.43 -20.76 -0.32 2.79 16 3 C -0.04 -0.46 5.37 -29.52 -0.16 -0.62 16 4 C 0.11 1.74 4.94 -4.04 -0.02 1.72 16 5 N -0.57 -10.73 2.47 -176.06 -0.44 -11.17 16 6 C 0.21 4.75 4.22 -5.19 -0.02 4.73 16 7 C -0.53 -14.53 9.94 -34.44 -0.34 -14.87 16 8 H 0.08 2.29 8.06 -52.49 -0.42 1.87 16 9 C 0.07 2.09 5.47 -17.82 -0.10 1.99 16 10 N -0.89 -26.79 13.96 55.43 0.77 -26.01 16 11 Si 0.87 20.56 27.47 -169.99 -4.67 15.89 16 12 H -0.27 -6.43 7.11 56.52 0.40 -6.03 16 13 H -0.28 -6.66 7.11 56.52 0.40 -6.26 16 14 H -0.26 -5.75 6.54 56.52 0.37 -5.38 16 15 C 0.56 10.46 7.60 -12.18 -0.09 10.37 16 16 O -0.52 -11.42 15.90 5.36 0.09 -11.33 16 17 C 0.11 1.61 6.52 -83.01 -0.54 1.07 16 18 C -0.11 -1.28 9.63 -39.05 -0.38 -1.65 16 19 C -0.07 -0.55 10.17 -39.32 -0.40 -0.95 16 20 C -0.14 -1.22 9.88 -39.28 -0.39 -1.61 16 21 C 0.16 1.86 7.27 -17.47 -0.13 1.73 16 22 Cl -0.03 -0.30 29.11 -51.86 -1.51 -1.81 16 23 N -0.45 -5.96 4.32 -6.94 -0.03 -5.99 16 24 H 0.10 1.23 6.76 -51.93 -0.35 0.88 16 25 H 0.10 1.17 8.14 -51.93 -0.42 0.75 16 26 H 0.09 1.39 8.02 -51.93 -0.42 0.98 16 27 H 0.11 1.76 5.23 -52.31 -0.27 1.49 16 28 H 0.04 0.77 7.13 -51.93 -0.37 0.40 16 29 H 0.04 0.99 6.81 -51.93 -0.35 0.64 16 30 H 0.27 7.44 8.31 -40.82 -0.34 7.10 16 31 H 0.16 1.76 7.66 -52.48 -0.40 1.36 16 32 H 0.15 0.72 8.06 -52.48 -0.42 0.30 16 33 H 0.15 0.86 8.06 -52.49 -0.42 0.44 16 LS Contribution 311.19 15.07 4.69 4.69 Total: -1.00 -32.55 311.19 -6.22 -38.78 By element: Atomic # 1 Polarization: 1.56 SS G_CDS: -3.02 Total: -1.47 kcal Atomic # 6 Polarization: 7.59 SS G_CDS: -2.89 Total: 4.70 kcal Atomic # 7 Polarization: -50.54 SS G_CDS: 1.09 Total: -49.45 kcal Atomic # 8 Polarization: -11.42 SS G_CDS: 0.09 Total: -11.33 kcal Atomic # 14 Polarization: 20.56 SS G_CDS: -4.67 Total: 15.89 kcal Atomic # 17 Polarization: -0.30 SS G_CDS: -1.51 Total: -1.81 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -32.55 -6.22 -38.78 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000051073236.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.298 kcal (2) G-P(sol) polarization free energy of solvation -32.550 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.748 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.225 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.775 kcal (6) G-S(sol) free energy of system = (1) + (5) 46.523 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds