Wall clock time and date at job start Tue Mar 31 2020 06:55:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 H 1.08993 * 109.47097 * 2 1 4 4 C 1.50707 * 109.46692 * 240.00368 * 2 1 3 5 5 H 1.07997 * 120.00412 * 275.00321 * 4 2 1 6 6 C 1.37878 * 119.99902 * 95.00630 * 4 2 1 7 7 N 1.31508 * 120.00170 * 184.90962 * 6 4 2 8 8 Si 1.86807 * 119.99876 * 4.91088 * 6 4 2 9 9 H 1.48503 * 109.47044 * 84.83582 * 8 6 4 10 10 H 1.48503 * 109.47110 * 204.83208 * 8 6 4 11 11 H 1.48499 * 109.47347 * 324.83521 * 8 6 4 12 12 N 1.46495 * 109.46950 * 120.00931 * 2 1 3 13 13 C 1.34780 * 119.99388 * 274.99377 * 12 2 1 14 14 O 1.21652 * 120.00735 * 0.02562 * 13 12 2 15 15 C 1.46987 * 119.99597 * 180.02562 * 13 12 2 16 16 C 1.35808 * 125.13058 * 180.02562 * 15 13 12 17 17 C 1.46249 * 106.07996 * 179.97438 * 16 15 13 18 18 C 1.39735 * 134.18370 * 180.02562 * 17 16 15 19 19 C 1.36610 * 119.73215 * 180.02562 * 18 17 16 20 20 C 1.38839 * 120.46208 * 359.96213 * 19 18 17 21 21 C 1.37890 * 120.72224 * 0.02562 * 20 19 18 22 22 Cl 1.73603 * 120.08239 * 180.02562 * 21 20 19 23 23 C 1.39136 * 119.83742 * 359.97438 * 21 20 19 24 24 O 1.34726 * 133.24284 * 180.29677 * 23 21 20 25 25 H 1.09006 * 109.47034 * 55.03017 * 1 2 3 26 26 H 1.08993 * 109.47019 * 295.03459 * 1 2 3 27 27 H 1.09001 * 109.47478 * 175.02850 * 1 2 3 28 28 H 0.96999 * 120.00090 * 179.97438 * 7 6 4 29 29 H 0.97000 * 120.00171 * 94.99890 * 12 2 1 30 30 H 1.07993 * 126.96081 * 359.94802 * 16 15 13 31 31 H 1.08003 * 120.12882 * 359.97438 * 18 17 16 32 32 H 1.08004 * 119.76639 * 179.97438 * 19 18 17 33 33 H 1.07995 * 119.63528 * 179.97438 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0323 -0.7104 -1.2306 5 1 2.1354 -1.7854 -1.2293 6 6 2.3603 0.0122 -2.3581 7 7 2.7059 -0.6129 -3.4623 8 14 2.3136 1.8793 -2.3173 9 1 3.5992 2.3949 -1.7820 10 1 2.1059 2.3994 -3.6926 11 1 1.1987 2.3276 -1.4448 12 7 2.0183 -0.6908 1.1960 13 6 2.1471 -0.0185 2.3570 14 8 1.8574 1.1618 2.4120 15 6 2.6375 -0.7114 3.5570 16 6 2.8064 -0.1379 4.7764 17 6 3.3066 -1.1946 5.6552 18 6 3.6701 -1.2493 7.0033 19 6 4.1126 -2.4257 7.5385 20 6 4.2027 -3.5667 6.7526 21 6 3.8487 -3.5341 5.4203 22 17 3.9673 -4.9709 4.4531 23 6 3.3953 -2.3472 4.8533 24 8 2.9827 -2.0146 3.6146 25 1 -0.3633 0.5890 -0.8422 26 1 -0.3633 0.4348 0.9311 27 1 -0.3634 -1.0238 -0.0891 28 1 2.9363 -0.1045 -4.2556 29 1 2.2490 -1.6319 1.1524 30 1 2.6113 0.8902 5.0431 31 1 3.6023 -0.3648 7.6194 32 1 4.3942 -2.4685 8.5803 33 1 4.5547 -4.4895 7.1893 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000084589223.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:55:03 Heat of formation + Delta-G solvation = -18.199930 kcal Electronic energy + Delta-G solvation = -20204.927522 eV Core-core repulsion = 16836.880756 eV Total energy + Delta-G solvation = -3368.046766 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 293.061 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -42.64623 -39.12873 -38.20562 -36.64756 -35.13191 -32.80312 -32.46775 -30.77294 -30.27834 -29.20236 -25.40598 -24.44960 -23.04485 -21.92913 -20.92447 -19.88649 -18.50218 -17.79157 -16.84086 -16.51382 -16.34928 -15.49923 -15.28353 -14.73769 -14.36494 -14.19781 -13.63362 -13.30045 -13.19325 -13.09330 -12.57582 -12.53009 -12.39290 -11.83710 -11.62163 -11.58991 -11.19430 -11.15170 -10.89202 -10.67929 -10.15616 -9.96866 -9.72315 -9.28535 -8.94571 -8.76623 -8.48413 -8.21848 -6.27814 -4.32709 0.32952 0.95998 1.71488 1.83953 2.34349 3.22461 3.26511 3.31110 3.36972 3.49252 3.60031 4.27918 4.34783 4.44531 4.58384 4.84546 4.85995 5.08509 5.17067 5.30500 5.40331 5.70284 5.80384 5.98555 6.08268 6.20494 6.25910 6.43301 6.58461 6.72687 6.80889 7.09793 7.24485 7.39683 7.98956 8.41289 8.60229 8.74942 9.32425 10.83676 Molecular weight = 293.06amu Principal moments of inertia in cm(-1) A = 0.022696 B = 0.004012 C = 0.003590 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1233.398274 B = 6977.590032 C = 7797.935242 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.228 3.772 3 H 0.054 0.946 4 C -0.533 4.533 5 H 0.081 0.919 6 C 0.083 3.917 7 N -0.885 5.885 8 Si 0.873 3.127 9 H -0.272 1.272 10 H -0.284 1.284 11 H -0.259 1.259 12 N -0.682 5.682 13 C 0.579 3.421 14 O -0.531 6.531 15 C 0.003 3.997 16 C -0.133 4.133 17 C -0.125 4.125 18 C -0.058 4.058 19 C -0.130 4.130 20 C -0.081 4.081 21 C -0.026 4.026 22 Cl -0.053 7.053 23 C 0.070 3.930 24 O -0.170 6.170 25 H 0.056 0.944 26 H 0.030 0.970 27 H 0.050 0.950 28 H 0.269 0.731 29 H 0.401 0.599 30 H 0.173 0.827 31 H 0.137 0.863 32 H 0.140 0.860 33 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.547 -4.788 21.659 22.328 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C 0.127 3.873 3 H 0.072 0.928 4 C -0.571 4.571 5 H 0.099 0.901 6 C -0.122 4.122 7 N -0.521 5.521 8 Si 0.700 3.300 9 H -0.197 1.197 10 H -0.210 1.210 11 H -0.184 1.184 12 N -0.329 5.329 13 C 0.362 3.638 14 O -0.411 6.411 15 C -0.048 4.048 16 C -0.154 4.154 17 C -0.127 4.127 18 C -0.076 4.076 19 C -0.148 4.148 20 C -0.100 4.100 21 C -0.054 4.054 22 Cl -0.024 7.024 23 C 0.020 3.980 24 O -0.071 6.071 25 H 0.075 0.925 26 H 0.049 0.951 27 H 0.069 0.931 28 H 0.079 0.921 29 H 0.236 0.764 30 H 0.191 0.809 31 H 0.154 0.846 32 H 0.157 0.843 33 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 2.375 -4.255 21.075 21.631 hybrid contribution 0.212 0.362 -0.170 0.452 sum 2.587 -3.893 20.905 21.421 Atomic orbital electron populations 1.22229 0.98041 1.00952 0.99517 1.19294 0.91313 0.94403 0.82297 0.92811 1.20981 1.45615 0.95782 0.94732 0.90099 1.24937 0.93451 0.98713 0.95105 1.69873 1.44221 1.36297 1.01689 0.86907 0.79869 0.85705 0.77559 1.19725 1.21015 1.18375 1.46772 1.62466 1.14386 1.09253 1.16861 0.79324 0.86097 0.81483 1.90840 1.52250 1.14147 1.83819 1.22714 1.03341 0.81167 0.97544 1.22680 1.02314 1.00071 0.90329 1.19899 1.04898 0.92711 0.95162 1.20460 0.96154 0.98742 0.92250 1.20722 1.01833 0.91815 1.00459 1.20913 0.98912 1.00065 0.90136 1.19760 1.07337 0.85734 0.92528 1.98403 1.96719 1.36349 1.70967 1.19305 1.00419 0.94443 0.83790 1.84145 1.67739 1.26196 1.28991 0.92506 0.95068 0.93134 0.92105 0.76415 0.80932 0.84559 0.84266 0.83691 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.21 9.47 37.16 0.35 -2.86 16 2 C 0.23 5.41 2.22 -69.08 -0.15 5.26 16 3 H 0.05 1.36 4.73 -51.93 -0.25 1.12 16 4 C -0.53 -14.29 9.05 -34.44 -0.31 -14.60 16 5 H 0.08 2.30 8.06 -52.49 -0.42 1.87 16 6 C 0.08 2.30 5.47 -17.82 -0.10 2.20 16 7 N -0.88 -25.88 13.96 55.43 0.77 -25.11 16 8 Si 0.87 21.19 26.99 -169.99 -4.59 16.61 16 9 H -0.27 -6.61 7.11 56.52 0.40 -6.21 16 10 H -0.28 -6.76 7.11 56.52 0.40 -6.36 16 11 H -0.26 -6.14 6.82 56.52 0.39 -5.76 16 12 N -0.68 -14.19 5.07 -56.15 -0.28 -14.48 16 13 C 0.58 11.52 7.76 -12.71 -0.10 11.42 16 14 O -0.53 -11.81 16.49 5.23 0.09 -11.72 16 15 C 0.00 0.05 7.07 -36.91 -0.26 -0.21 16 16 C -0.13 -1.89 10.81 -37.24 -0.40 -2.29 16 17 C -0.13 -1.59 6.38 -105.19 -0.67 -2.26 16 18 C -0.06 -0.53 10.06 -39.61 -0.40 -0.93 16 19 C -0.13 -1.00 9.98 -39.95 -0.40 -1.40 16 20 C -0.08 -0.72 9.79 -39.49 -0.39 -1.10 16 21 C -0.03 -0.31 6.33 -39.38 -0.25 -0.56 16 22 Cl -0.05 -0.64 28.96 -51.86 -1.50 -2.14 16 23 C 0.07 0.99 7.20 -38.32 -0.28 0.71 16 24 O -0.17 -2.76 10.28 2.77 0.03 -2.73 16 25 H 0.06 1.22 8.14 -51.93 -0.42 0.80 16 26 H 0.03 0.63 8.14 -51.93 -0.42 0.21 16 27 H 0.05 1.03 8.14 -51.93 -0.42 0.61 16 28 H 0.27 7.38 8.31 -40.82 -0.34 7.04 16 29 H 0.40 7.74 8.31 -40.82 -0.34 7.40 16 30 H 0.17 2.14 8.06 -52.49 -0.42 1.72 16 31 H 0.14 0.89 8.06 -52.48 -0.42 0.47 16 32 H 0.14 0.62 8.06 -52.48 -0.42 0.20 16 33 H 0.15 0.89 8.06 -52.49 -0.42 0.47 16 LS Contribution 310.41 15.07 4.68 4.68 Total: -1.00 -30.65 310.41 -7.28 -37.93 By element: Atomic # 1 Polarization: 6.70 SS G_CDS: -3.12 Total: 3.58 kcal Atomic # 6 Polarization: -3.27 SS G_CDS: -3.35 Total: -6.62 kcal Atomic # 7 Polarization: -40.08 SS G_CDS: 0.49 Total: -39.59 kcal Atomic # 8 Polarization: -14.56 SS G_CDS: 0.11 Total: -14.45 kcal Atomic # 14 Polarization: 21.19 SS G_CDS: -4.59 Total: 16.61 kcal Atomic # 17 Polarization: -0.64 SS G_CDS: -1.50 Total: -2.14 kcal Total LS contribution 4.68 Total: 4.68 kcal Total: -30.65 -7.28 -37.93 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000084589223.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.732 kcal (2) G-P(sol) polarization free energy of solvation -30.652 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.921 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.279 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.932 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.200 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds