Wall clock time and date at job start Tue Mar 31 2020 07:11:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.35357 * 126.75086 * 2 1 4 4 N 1.35307 * 106.17300 * 179.97438 * 3 2 1 5 5 C 1.46507 * 125.86324 * 180.02562 * 4 3 2 6 6 C 1.50697 * 109.47102 * 124.99615 * 5 4 3 7 7 C 1.38106 * 120.03142 * 265.00068 * 6 5 4 8 8 C 1.38389 * 120.06056 * 180.02562 * 7 6 5 9 9 Cl 1.73598 * 119.94864 * 179.97438 * 8 7 6 10 10 C 1.38433 * 120.10688 * 359.97438 * 8 7 6 11 11 C 1.38061 * 120.06091 * 359.97438 * 10 8 7 12 12 C 1.38859 * 120.02727 * 85.25048 * 6 5 4 13 13 O 1.35765 * 120.05435 * 0.02579 * 12 6 5 14 14 C 1.34827 * 116.99596 * 174.62920 * 13 12 6 15 15 H 1.07994 * 120.00467 * 5.06318 * 14 13 12 16 16 C 1.38651 * 119.99996 * 185.06556 * 14 13 12 17 17 N 1.31563 * 119.99469 * 359.97438 * 16 14 13 18 18 Si 1.86799 * 120.00346 * 180.02562 * 16 14 13 19 19 H 1.48500 * 109.47359 * 59.99360 * 18 16 14 20 20 H 1.48502 * 109.47142 * 179.97438 * 18 16 14 21 21 H 1.48503 * 109.46881 * 299.99634 * 18 16 14 22 22 N 1.28707 * 108.26876 * 0.25696 * 4 3 2 23 23 N 1.28640 * 110.17711 * 359.56482 * 22 4 3 24 24 H 1.09000 * 109.47490 * 90.00129 * 1 2 3 25 25 H 1.09006 * 109.47213 * 210.00003 * 1 2 3 26 26 H 1.09003 * 109.47209 * 329.99974 * 1 2 3 27 27 H 1.08005 * 126.90763 * 359.95489 * 3 2 1 28 28 H 1.09006 * 109.47213 * 4.99946 * 5 4 3 29 29 H 1.08994 * 109.47153 * 244.99889 * 5 4 3 30 30 H 1.08007 * 119.97048 * 359.97438 * 7 6 5 31 31 H 1.08002 * 119.97060 * 179.97438 * 10 8 7 32 32 H 1.08001 * 120.03433 * 180.02562 * 11 10 8 33 33 H 0.97008 * 119.99309 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3169 1.0845 0.0000 4 7 3.5836 0.6090 0.0006 5 6 4.8045 1.4188 0.0013 6 6 5.6729 1.0173 1.1656 7 6 5.6024 1.7171 2.3542 8 6 6.4000 1.3492 3.4236 9 17 6.3094 2.2312 4.9161 10 6 7.2700 0.2789 3.3051 11 6 7.3436 -0.4245 2.1195 12 6 6.5486 -0.0533 1.0426 13 8 6.6238 -0.7393 -0.1266 14 6 7.5712 -1.6944 -0.2158 15 1 8.1728 -1.9407 0.6466 16 6 7.7733 -2.3606 -1.4150 17 7 7.0401 -2.0609 -2.4654 18 14 9.0854 -3.6844 -1.5386 19 1 8.7857 -4.7703 -0.5710 20 1 9.1003 -4.2394 -2.9159 21 1 10.4129 -3.0961 -1.2270 22 7 3.5318 -0.6771 -0.0046 23 7 2.3074 -1.0718 0.0007 24 1 -0.3634 0.0000 -1.0276 25 1 -0.3634 -0.8900 0.5139 26 1 -0.3634 0.8900 0.5138 27 1 2.0130 2.1210 -0.0007 28 1 4.5413 2.4729 0.0909 29 1 5.3478 1.2579 -0.9297 30 1 4.9247 2.5527 2.4489 31 1 7.8918 -0.0060 4.1410 32 1 8.0222 -1.2597 2.0277 33 1 7.1817 -2.5267 -3.3045 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000093574080.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:11:18 Heat of formation + Delta-G solvation = 86.873303 kcal Electronic energy + Delta-G solvation = -20704.953299 eV Core-core repulsion = 17373.755601 eV Total energy + Delta-G solvation = -3331.197698 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 293.067 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -42.67675 -39.44002 -36.96682 -35.78621 -34.56224 -32.46186 -32.12643 -30.95853 -29.03975 -27.27662 -26.39451 -25.51814 -22.27158 -21.80878 -21.17057 -20.26800 -18.23614 -17.35333 -16.68176 -15.96814 -15.43637 -15.05680 -14.59362 -14.47365 -13.99774 -13.78674 -13.51270 -13.19492 -13.02470 -12.58194 -12.48382 -12.31072 -12.24775 -11.88190 -11.39326 -11.17123 -11.14570 -10.84745 -10.58612 -10.54503 -10.48264 -10.26437 -9.71841 -9.39251 -8.94565 -8.64467 -8.53902 -7.40465 -6.61066 -4.18093 1.64438 1.96100 2.17806 2.70644 3.03320 3.06564 3.07177 3.08298 3.10690 3.84043 4.23912 4.68735 4.85084 4.97842 5.03341 5.06804 5.22602 5.34012 5.42728 5.60351 5.70551 5.75273 5.79787 5.96473 6.04190 6.24327 6.35902 6.43643 6.64347 6.71458 6.73119 6.98440 7.11220 7.12721 7.39308 7.79955 8.82526 9.15413 9.44210 10.54308 Molecular weight = 293.07amu Principal moments of inertia in cm(-1) A = 0.009559 B = 0.007109 C = 0.004349 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2928.363924 B = 3937.596714 C = 6436.976259 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C -0.037 4.037 3 C -0.071 4.071 4 N -0.274 5.274 5 C 0.176 3.824 6 C -0.198 4.198 7 C -0.036 4.036 8 C -0.136 4.136 9 Cl -0.104 7.104 10 C -0.045 4.045 11 C -0.225 4.225 12 C 0.181 3.819 13 O -0.142 6.142 14 C -0.394 4.394 15 H 0.095 0.905 16 C 0.047 3.953 17 N -0.844 5.844 18 Si 0.942 3.058 19 H -0.267 1.267 20 H -0.276 1.276 21 H -0.268 1.268 22 N -0.035 5.035 23 N -0.288 5.288 24 H 0.069 0.931 25 H 0.071 0.929 26 H 0.068 0.932 27 H 0.181 0.819 28 H 0.103 0.897 29 H 0.112 0.888 30 H 0.121 0.879 31 H 0.120 0.880 32 H 0.139 0.861 33 H 0.274 0.726 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.892 8.448 5.598 11.253 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.176 4.176 3 C -0.222 4.222 4 N -0.068 5.068 5 C 0.057 3.943 6 C -0.201 4.201 7 C -0.055 4.055 8 C -0.163 4.163 9 Cl -0.076 7.076 10 C -0.064 4.064 11 C -0.244 4.244 12 C 0.123 3.877 13 O -0.041 6.041 14 C -0.469 4.469 15 H 0.112 0.888 16 C -0.160 4.160 17 N -0.476 5.476 18 Si 0.766 3.234 19 H -0.192 1.192 20 H -0.201 1.201 21 H -0.193 1.193 22 N -0.014 5.014 23 N -0.155 5.155 24 H 0.087 0.913 25 H 0.090 0.910 26 H 0.087 0.913 27 H 0.198 0.802 28 H 0.121 0.879 29 H 0.130 0.870 30 H 0.139 0.861 31 H 0.138 0.862 32 H 0.157 0.843 33 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -4.205 7.149 5.187 9.783 hybrid contribution 0.224 0.541 0.175 0.612 sum -3.981 7.690 5.362 10.185 Atomic orbital electron populations 1.19950 0.86915 1.02721 1.02298 1.21977 0.97882 0.89488 1.08221 1.23270 0.84375 1.01385 1.13142 1.47754 1.07224 1.06513 1.45342 1.20639 0.81136 0.92554 1.00019 1.18438 1.04770 1.01101 0.95756 1.20352 0.96612 0.98140 0.90418 1.20156 1.07186 1.00937 0.88049 1.98282 1.98193 1.76225 1.34868 1.20704 0.95747 0.92770 0.97200 1.21114 1.05655 1.04493 0.93156 1.19066 0.91875 0.89428 0.87325 1.83990 1.49107 1.42616 1.28381 1.21347 1.13212 1.13891 0.98465 0.88795 1.25328 0.98206 0.98354 0.94141 1.70030 1.36679 1.39483 1.01378 0.85755 0.79578 0.79781 0.78254 1.19233 1.20119 1.19337 1.78674 1.14397 0.92290 1.16072 1.75144 0.96000 1.26259 1.18079 0.91254 0.91009 0.91287 0.80160 0.87909 0.86978 0.86060 0.86188 0.84343 0.91615 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.70 10.45 36.00 0.38 -0.33 16 2 C -0.04 -0.63 7.25 -82.78 -0.60 -1.23 16 3 C -0.07 -1.09 11.50 -17.05 -0.20 -1.28 16 4 N -0.27 -5.14 3.43 -62.44 -0.21 -5.36 16 5 C 0.18 2.96 6.31 -5.19 -0.03 2.93 16 6 C -0.20 -3.74 5.27 -104.44 -0.55 -4.29 16 7 C -0.04 -0.60 9.46 -39.57 -0.37 -0.97 16 8 C -0.14 -2.32 6.32 -39.45 -0.25 -2.57 16 9 Cl -0.10 -1.54 28.95 -51.86 -1.50 -3.04 16 10 C -0.05 -0.80 9.82 -39.57 -0.39 -1.18 16 11 C -0.22 -4.56 9.17 -39.40 -0.36 -4.92 16 12 C 0.18 4.02 6.62 -39.10 -0.26 3.76 16 13 O -0.14 -3.68 8.89 0.01 0.00 -3.68 16 14 C -0.39 -10.30 9.49 30.88 0.29 -10.01 16 15 H 0.09 2.26 5.20 -52.49 -0.27 1.99 16 16 C 0.05 1.23 5.49 -17.51 -0.10 1.13 16 17 N -0.84 -23.59 13.67 55.48 0.76 -22.84 16 18 Si 0.94 19.71 29.55 -169.99 -5.02 14.68 16 19 H -0.27 -5.50 7.11 56.52 0.40 -5.10 16 20 H -0.28 -5.69 7.11 56.52 0.40 -5.29 16 21 H -0.27 -5.38 7.11 56.52 0.40 -4.98 16 22 N -0.03 -0.80 12.93 60.35 0.78 -0.02 16 23 N -0.29 -6.24 12.41 33.29 0.41 -5.83 16 24 H 0.07 0.73 8.14 -51.93 -0.42 0.30 16 25 H 0.07 0.84 8.14 -51.93 -0.42 0.41 16 26 H 0.07 0.61 8.14 -51.93 -0.42 0.19 16 27 H 0.18 1.85 8.06 -52.48 -0.42 1.43 16 28 H 0.10 1.22 7.98 -51.93 -0.41 0.80 16 29 H 0.11 2.08 7.68 -51.93 -0.40 1.68 16 30 H 0.12 1.69 8.06 -52.48 -0.42 1.27 16 31 H 0.12 1.83 8.06 -52.49 -0.42 1.41 16 32 H 0.14 2.78 5.64 -52.49 -0.30 2.48 16 33 H 0.27 7.10 8.31 -40.82 -0.34 6.76 16 LS Contribution 311.71 15.07 4.70 4.70 Total: -1.00 -31.40 311.71 -5.58 -36.99 By element: Atomic # 1 Polarization: 6.40 SS G_CDS: -3.05 Total: 3.35 kcal Atomic # 6 Polarization: -16.52 SS G_CDS: -2.44 Total: -18.96 kcal Atomic # 7 Polarization: -35.77 SS G_CDS: 1.74 Total: -34.04 kcal Atomic # 8 Polarization: -3.68 SS G_CDS: 0.00 Total: -3.68 kcal Atomic # 14 Polarization: 19.71 SS G_CDS: -5.02 Total: 14.68 kcal Atomic # 17 Polarization: -1.54 SS G_CDS: -1.50 Total: -3.04 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -31.40 -5.58 -36.99 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000093574080.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 123.858 kcal (2) G-P(sol) polarization free energy of solvation -31.403 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.455 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.582 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.985 kcal (6) G-S(sol) free energy of system = (1) + (5) 86.873 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds