Wall clock time and date at job start Tue Mar 31 2020 07:02:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.43202 * 179.97438 * 2 1 4 4 C 1.39812 * 120.07068 * 243.25954 * 3 2 1 5 5 C 1.37654 * 119.94612 * 179.97438 * 4 3 2 6 6 C 1.39153 * 120.08775 * 0.02805 * 5 4 3 7 7 N 1.39260 * 119.92767 * 180.27416 * 6 5 4 8 8 C 1.46498 * 119.99926 * 359.71904 * 7 6 5 9 9 C 1.50702 * 109.47142 * 179.97438 * 8 7 6 10 10 O 1.21277 * 119.99837 * 0.02562 * 9 8 7 11 11 N 1.34772 * 120.00173 * 179.97438 * 9 8 7 12 12 C 1.46502 * 120.00213 * 180.02562 * 11 9 8 13 13 C 1.50699 * 109.47097 * 180.02562 * 12 11 9 14 14 H 1.08000 * 120.00022 * 0.02562 * 13 12 11 15 15 C 1.37871 * 119.99654 * 179.97438 * 13 12 11 16 16 N 1.31517 * 120.00291 * 0.02562 * 15 13 12 17 17 Si 1.86803 * 119.99830 * 179.97438 * 15 13 12 18 18 H 1.48493 * 109.47078 * 0.02562 * 17 15 13 19 19 H 1.48504 * 109.46910 * 120.00474 * 17 15 13 20 20 H 1.48500 * 109.47375 * 239.99992 * 17 15 13 21 21 C 1.39255 * 120.14354 * 359.97438 * 6 5 4 22 22 Cl 1.73600 * 119.96969 * 180.02562 * 21 6 5 23 23 C 1.37753 * 120.05559 * 359.97438 * 21 6 5 24 24 H 1.08003 * 120.02664 * 359.97438 * 4 3 2 25 25 H 1.07997 * 119.96177 * 180.02562 * 5 4 3 26 26 H 0.96995 * 119.99915 * 179.72012 * 7 6 5 27 27 H 1.08995 * 109.47466 * 300.00507 * 8 7 6 28 28 H 1.09007 * 109.47147 * 60.00327 * 8 7 6 29 29 H 0.97004 * 119.99672 * 0.02562 * 11 9 8 30 30 H 1.09004 * 109.47032 * 300.00381 * 12 11 9 31 31 H 1.08999 * 109.47108 * 59.99912 * 12 11 9 32 32 H 0.96999 * 119.99822 * 180.02562 * 16 15 13 33 33 H 1.08001 * 120.04716 * 179.97438 * 23 21 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2683 0.5454 1.0805 5 6 4.6449 0.5442 1.0781 6 6 5.3401 0.0021 0.0015 7 7 6.7327 -0.0026 0.0051 8 6 7.4641 0.5684 1.1387 9 6 8.9460 0.4385 0.8972 10 8 9.3511 -0.0796 -0.1217 11 7 9.8210 0.8989 1.8131 12 6 11.2615 0.7731 1.5781 13 6 12.0139 1.3603 2.7443 14 1 11.4731 1.7844 3.5774 15 6 13.3926 1.3552 2.7481 16 7 14.0511 0.8383 1.7338 17 14 14.3253 2.0837 4.1933 18 1 13.3595 2.5975 5.1974 19 1 15.1736 1.0349 4.8144 20 1 15.1846 3.1974 3.7173 21 6 4.6463 -0.5414 -1.0767 22 17 5.5182 -1.2171 -2.4172 23 6 3.2688 -0.5442 -1.0800 24 1 2.7297 0.9668 1.9165 25 1 5.1861 0.9645 1.9128 26 1 7.2183 -0.3838 -0.7430 27 1 7.2040 1.6215 1.2458 28 1 7.1967 0.0337 2.0502 29 1 9.4968 1.3136 2.6279 30 1 11.5216 -0.2801 1.4714 31 1 11.5290 1.3074 0.6664 32 1 15.0211 0.8344 1.7367 33 1 2.7309 -0.9654 -1.9164 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000225235487.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:02:45 Heat of formation + Delta-G solvation = 5.264742 kcal Electronic energy + Delta-G solvation = -19159.000565 eV Core-core repulsion = 15824.264054 eV Total energy + Delta-G solvation = -3334.736511 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 293.067 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -40.20526 -39.08750 -37.07116 -36.53450 -35.41810 -34.38311 -32.51908 -31.28078 -30.63039 -28.19896 -26.41739 -23.41949 -23.25705 -22.21109 -20.04719 -19.27470 -18.29621 -17.02262 -16.55822 -15.61924 -15.61702 -15.34991 -15.20583 -14.64464 -14.48337 -14.25329 -13.92171 -13.71463 -13.69340 -12.98695 -12.98201 -12.78637 -12.58785 -12.10349 -11.91900 -11.62517 -11.62152 -11.16650 -11.06759 -11.00259 -10.46971 -10.43551 -9.52683 -9.42692 -9.27434 -8.88159 -8.12895 -7.80139 -6.27557 -4.35453 0.60231 0.85202 1.87311 2.52134 2.66586 2.90536 3.00155 3.16747 3.24376 3.26801 3.55140 3.72125 3.86037 4.25721 4.34175 4.60269 4.80777 4.97861 5.09041 5.10484 5.19778 5.20217 5.38533 5.51732 5.67387 5.92109 6.15794 6.73333 7.11545 7.16227 7.30760 7.35056 7.36922 7.51114 7.83227 8.36220 8.58396 8.82452 9.31481 10.82511 Molecular weight = 293.07amu Principal moments of inertia in cm(-1) A = 0.030270 B = 0.002668 C = 0.002456 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 924.798213 B =10494.051527 C =11398.391549 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.435 5.435 2 C 0.267 3.733 3 C -0.097 4.097 4 C -0.009 4.009 5 C -0.197 4.197 6 C 0.268 3.732 7 N -0.710 5.710 8 C 0.093 3.907 9 C 0.492 3.508 10 O -0.550 6.550 11 N -0.703 5.703 12 C 0.249 3.751 13 C -0.546 4.546 14 H 0.065 0.935 15 C 0.064 3.936 16 N -0.884 5.884 17 Si 0.905 3.095 18 H -0.271 1.271 19 H -0.282 1.282 20 H -0.282 1.282 21 C -0.124 4.124 22 Cl -0.057 7.057 23 C -0.007 4.007 24 H 0.137 0.863 25 H 0.143 0.857 26 H 0.420 0.580 27 H 0.096 0.904 28 H 0.096 0.904 29 H 0.394 0.606 30 H 0.029 0.971 31 H 0.029 0.971 32 H 0.267 0.733 33 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -18.778 -0.583 -1.333 18.834 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.111 5.111 2 C -0.048 4.048 3 C -0.103 4.103 4 C -0.030 4.030 5 C -0.220 4.220 6 C 0.156 3.844 7 N -0.338 5.338 8 C -0.035 4.035 9 C 0.275 3.725 10 O -0.429 6.429 11 N -0.351 5.351 12 C 0.128 3.872 13 C -0.584 4.584 14 H 0.083 0.917 15 C -0.140 4.140 16 N -0.521 5.521 17 Si 0.732 3.268 18 H -0.196 1.196 19 H -0.207 1.207 20 H -0.207 1.207 21 C -0.156 4.156 22 Cl -0.028 7.028 23 C -0.029 4.029 24 H 0.155 0.845 25 H 0.161 0.839 26 H 0.261 0.739 27 H 0.113 0.887 28 H 0.113 0.887 29 H 0.227 0.773 30 H 0.047 0.953 31 H 0.047 0.953 32 H 0.076 0.924 33 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -19.743 -0.967 -2.088 19.877 hybrid contribution 1.259 0.365 0.724 1.497 sum -18.484 -0.602 -1.365 18.544 Atomic orbital electron populations 1.81261 1.12091 1.09835 1.07906 1.25544 0.92401 0.93200 0.93608 1.15530 0.84328 1.11893 0.98592 1.20957 0.93321 0.92978 0.95768 1.20564 0.93805 1.08338 0.99330 1.17764 0.84027 0.90622 0.91990 1.44756 1.02117 1.63352 1.23584 1.21328 0.91250 1.00462 0.90416 1.20235 0.87632 0.79947 0.84687 1.90687 1.79592 1.45060 1.27578 1.46418 1.09400 1.58412 1.20891 1.19190 0.72599 0.97865 0.97496 1.21223 0.91646 1.41034 1.04532 0.91704 1.24960 0.97509 0.95039 0.96507 1.69977 1.08163 1.43805 1.30165 0.86338 0.79779 0.78851 0.81814 1.19582 1.20747 1.20741 1.20080 0.92056 1.10888 0.92570 1.98388 1.76041 1.83953 1.44445 1.20721 0.91200 0.94140 0.96796 0.84488 0.83916 0.73907 0.88651 0.88655 0.77300 0.95275 0.95268 0.92370 0.84172 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -5.24 18.54 41.84 0.78 -4.47 16 2 C 0.27 2.58 15.33 -22.47 -0.34 2.23 16 3 C -0.10 -0.77 5.74 -106.80 -0.61 -1.38 16 4 C -0.01 -0.06 9.74 -39.21 -0.38 -0.44 16 5 C -0.20 -1.44 9.28 -39.46 -0.37 -1.80 16 6 C 0.27 2.57 6.65 -83.77 -0.56 2.01 16 7 N -0.71 -8.12 5.64 -59.76 -0.34 -8.46 16 8 C 0.09 1.00 5.38 -5.19 -0.03 0.97 16 9 C 0.49 8.25 7.90 -10.99 -0.09 8.16 16 10 O -0.55 -11.62 15.67 5.56 0.09 -11.53 16 11 N -0.70 -12.78 5.55 -61.47 -0.34 -13.12 16 12 C 0.25 6.09 5.43 -5.19 -0.03 6.06 16 13 C -0.55 -13.87 9.28 -34.44 -0.32 -14.19 16 14 H 0.06 1.53 7.60 -52.49 -0.40 1.13 16 15 C 0.06 1.69 5.46 -17.82 -0.10 1.59 16 16 N -0.88 -24.99 13.29 55.43 0.74 -24.26 16 17 Si 0.91 19.90 29.54 -169.99 -5.02 14.88 16 18 H -0.27 -5.74 7.11 56.52 0.40 -5.34 16 19 H -0.28 -6.19 7.11 56.52 0.40 -5.79 16 20 H -0.28 -6.19 7.11 56.52 0.40 -5.79 16 21 C -0.12 -1.18 6.33 -39.38 -0.25 -1.43 16 22 Cl -0.06 -0.60 27.57 -51.86 -1.43 -2.03 16 23 C -0.01 -0.05 9.52 -39.18 -0.37 -0.43 16 24 H 0.14 0.62 8.06 -52.48 -0.42 0.19 16 25 H 0.14 0.77 6.70 -52.49 -0.35 0.41 16 26 H 0.42 5.67 6.08 -40.82 -0.25 5.42 16 27 H 0.10 0.79 7.94 -51.93 -0.41 0.38 16 28 H 0.10 0.79 7.93 -51.92 -0.41 0.38 16 29 H 0.39 5.82 8.32 -40.82 -0.34 5.48 16 30 H 0.03 0.80 8.14 -51.93 -0.42 0.37 16 31 H 0.03 0.80 8.14 -51.93 -0.42 0.38 16 32 H 0.27 7.07 8.31 -40.82 -0.34 6.73 16 33 H 0.14 0.94 8.06 -52.49 -0.42 0.52 16 LS Contribution 318.42 15.07 4.80 4.80 Total: -1.00 -31.19 318.42 -7.16 -38.36 By element: Atomic # 1 Polarization: 7.46 SS G_CDS: -2.99 Total: 4.48 kcal Atomic # 6 Polarization: 4.80 SS G_CDS: -3.45 Total: 1.35 kcal Atomic # 7 Polarization: -51.14 SS G_CDS: 0.83 Total: -50.31 kcal Atomic # 8 Polarization: -11.62 SS G_CDS: 0.09 Total: -11.53 kcal Atomic # 14 Polarization: 19.90 SS G_CDS: -5.02 Total: 14.88 kcal Atomic # 17 Polarization: -0.60 SS G_CDS: -1.43 Total: -2.03 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -31.19 -7.16 -38.36 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000225235487.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.624 kcal (2) G-P(sol) polarization free energy of solvation -31.195 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.429 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.164 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.359 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.265 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds