Wall clock time and date at job start Tue Mar 31 2020 06:48:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17402 * 1 3 3 C 1.47193 * 179.97438 * 2 1 4 4 N 1.46501 * 109.47403 * 44.34983 * 3 2 1 5 5 C 1.36942 * 119.99789 * 264.64314 * 4 3 2 6 6 H 1.07997 * 119.99893 * 196.38011 * 5 4 3 7 7 C 1.38816 * 120.00040 * 16.37348 * 5 4 3 8 8 N 1.31616 * 119.99652 * 22.66838 * 7 5 4 9 9 Si 1.86797 * 119.99998 * 202.66526 * 7 5 4 10 10 H 1.48506 * 109.47057 * 90.00590 * 9 7 5 11 11 H 1.48505 * 109.46884 * 210.00062 * 9 7 5 12 12 H 1.48494 * 109.47235 * 330.00536 * 9 7 5 13 13 C 1.46494 * 120.00115 * 84.64516 * 4 3 2 14 14 C 1.50710 * 109.46906 * 269.99755 * 13 4 3 15 15 C 1.38271 * 119.91825 * 90.00260 * 14 13 4 16 16 C 1.38544 * 120.04412 * 180.02562 * 15 14 13 17 17 C 1.39258 * 119.83907 * 359.96797 * 16 15 14 18 18 C 1.38602 * 119.82177 * 0.02562 * 17 16 15 19 19 Cl 1.73600 * 119.99430 * 180.02562 * 18 17 16 20 20 C 1.38203 * 119.92123 * 269.97814 * 14 13 4 21 21 O 1.36521 * 108.64033 * 179.97438 * 17 16 15 22 22 C 1.43995 * 105.47738 * 17.27264 * 21 17 16 23 23 O 1.36497 * 131.51718 * 179.97438 * 16 15 14 24 24 H 4.40642 * 5.51451 * 179.97438 * 4 1 2 25 25 H 1.09001 * 109.47160 * 284.34523 * 3 2 1 26 26 H 1.09007 * 109.47241 * 164.34774 * 3 2 1 27 27 H 0.97001 * 120.00039 * 179.97438 * 8 7 5 28 28 H 1.09001 * 109.46967 * 150.00227 * 13 4 3 29 29 H 1.08997 * 109.47374 * 29.99823 * 13 4 3 30 30 H 1.07994 * 119.98065 * 0.02562 * 15 14 13 31 31 H 1.07997 * 119.94336 * 0.02562 * 20 14 13 32 32 H 1.09000 * 110.56926 * 214.32118 * 22 21 17 33 33 H 1.08998 * 110.57140 * 91.45352 * 22 21 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6459 0.0007 0.0000 4 7 3.1348 -0.9868 -0.9655 5 6 3.4680 -2.2473 -0.5466 6 1 4.0666 -2.8859 -1.1791 7 6 3.0364 -2.7040 0.6912 8 7 1.9823 -2.1608 1.2621 9 14 3.9517 -4.0897 1.5465 10 1 5.0200 -3.5204 2.4067 11 1 3.0030 -4.8665 2.3843 12 1 4.5598 -4.9836 0.5285 13 6 3.2672 -0.6258 -2.3791 14 6 1.9790 -0.9327 -3.0987 15 6 0.9903 0.0302 -3.1837 16 6 -0.1951 -0.2493 -3.8441 17 6 -0.3876 -1.5014 -4.4222 18 6 0.6076 -2.4620 -4.3335 19 17 0.3726 -4.0242 -5.0531 20 6 1.7890 -2.1755 -3.6724 21 8 -1.6216 -1.5276 -5.0057 22 6 -2.0159 -0.1485 -5.1327 23 8 -1.3079 0.5095 -4.0658 24 1 -1.0499 -0.0004 -0.0001 25 1 3.0094 -0.2538 0.9956 26 1 3.0089 0.9904 -0.2773 27 1 1.6804 -2.4801 2.1269 28 1 4.0788 -1.1999 -2.8262 29 1 3.4858 0.4387 -2.4634 30 1 1.1422 1.0007 -2.7350 31 1 2.5636 -2.9250 -3.6039 32 1 -3.0927 -0.0443 -4.9997 33 1 -1.7080 0.2504 -6.0992 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491255056.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:48:35 Heat of formation + Delta-G solvation = 47.393136 kcal Electronic energy + Delta-G solvation = -21186.166214 eV Core-core repulsion = 17820.963776 eV Total energy + Delta-G solvation = -3365.202437 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 293.061 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -41.89142 -38.13240 -36.49859 -35.93361 -35.53912 -31.83714 -31.58298 -29.98540 -29.63970 -26.51734 -25.93780 -25.14672 -22.65179 -22.44624 -20.85805 -17.74079 -17.57819 -17.33219 -17.12684 -16.42544 -16.03097 -15.02760 -14.59474 -14.33280 -13.84809 -13.82384 -13.61784 -13.43848 -12.99646 -12.78640 -12.71635 -11.89320 -11.57075 -11.55746 -11.52095 -11.06635 -10.92742 -10.76645 -10.63553 -10.37050 -10.28219 -10.00137 -8.95622 -8.87050 -8.48078 -8.19395 -7.72551 -7.14660 -5.88607 -3.27459 1.44032 1.50635 2.37542 2.95301 3.33466 3.40908 3.42574 3.61744 3.83693 4.21198 4.38556 4.49794 4.74302 4.90459 4.94087 5.23435 5.34473 5.48566 5.54702 5.61278 5.72035 5.84728 5.89499 6.21557 6.32828 6.41892 6.50380 6.65055 6.74995 6.98548 7.15996 7.35551 7.41350 7.66944 8.16037 8.99291 9.20190 9.64475 10.09126 11.13687 Molecular weight = 293.06amu Principal moments of inertia in cm(-1) A = 0.016818 B = 0.006133 C = 0.005158 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1664.504718 B = 4564.119503 C = 5426.665481 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.290 4.290 2 C -0.100 4.100 3 C 0.266 3.734 4 N -0.571 5.571 5 C -0.267 4.267 6 H 0.080 0.920 7 C 0.007 3.993 8 N -0.879 5.879 9 Si 0.903 3.097 10 H -0.286 1.286 11 H -0.293 1.293 12 H -0.278 1.278 13 C 0.179 3.821 14 C -0.059 4.059 15 C -0.079 4.079 16 C 0.042 3.958 17 C 0.014 3.986 18 C -0.013 4.013 19 Cl -0.071 7.071 20 C -0.087 4.087 21 O -0.305 6.305 22 C 0.213 3.787 23 O -0.308 6.308 24 H 0.186 0.814 25 H 0.098 0.902 26 H 0.039 0.961 27 H 0.256 0.744 28 H 0.068 0.932 29 H 0.058 0.942 30 H 0.131 0.869 31 H 0.143 0.857 32 H 0.126 0.874 33 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.347 4.820 -11.191 12.409 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.310 4.310 2 C -0.103 4.103 3 C 0.141 3.859 4 N -0.288 5.288 5 C -0.396 4.396 6 H 0.097 0.903 7 C -0.194 4.194 8 N -0.520 5.520 9 Si 0.732 3.268 10 H -0.213 1.213 11 H -0.219 1.219 12 H -0.204 1.204 13 C 0.053 3.947 14 C -0.064 4.064 15 C -0.098 4.098 16 C -0.003 4.003 17 C -0.032 4.032 18 C -0.040 4.040 19 Cl -0.042 7.042 20 C -0.107 4.107 21 O -0.222 6.222 22 C 0.101 3.899 23 O -0.224 6.224 24 H 0.203 0.797 25 H 0.116 0.884 26 H 0.057 0.943 27 H 0.067 0.933 28 H 0.086 0.914 29 H 0.076 0.924 30 H 0.149 0.851 31 H 0.160 0.840 32 H 0.143 0.857 33 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -2.590 4.644 -11.012 12.229 hybrid contribution -0.691 -1.139 0.443 1.404 sum -3.282 3.504 -10.570 11.609 Atomic orbital electron populations 1.24109 0.95254 1.06490 1.05097 1.24104 0.95104 0.94896 0.96181 1.17915 0.82949 0.89461 0.95606 1.44555 1.73313 1.11121 0.99834 1.19276 1.26457 0.92418 1.01449 0.90258 1.24970 0.96194 0.98542 0.99646 1.70151 1.20922 1.43664 1.17299 0.86286 0.79246 0.81519 0.79725 1.21265 1.21910 1.20353 1.20114 0.90884 0.98937 0.84804 1.20967 1.00008 0.91833 0.93589 1.19986 0.88999 1.01084 0.99766 1.19561 0.89160 0.89119 1.02415 1.19160 0.86455 0.95135 1.02423 1.19806 0.93767 0.86334 1.04094 1.98339 1.97087 1.26590 1.82221 1.20705 0.95222 0.97760 0.96967 1.87362 1.29381 1.26973 1.78441 1.25510 0.98529 0.75140 0.90745 1.87346 1.32852 1.48884 1.53366 0.79717 0.88400 0.94267 0.93330 0.91411 0.92372 0.85131 0.83955 0.85660 0.90397 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.29 -6.63 19.02 29.55 0.56 -6.07 16 2 C -0.10 -2.33 10.29 -37.13 -0.38 -2.71 16 3 C 0.27 5.87 5.45 -6.83 -0.04 5.83 16 4 N -0.57 -12.71 2.49 -177.95 -0.44 -13.15 16 5 C -0.27 -6.63 9.66 -15.06 -0.15 -6.77 16 6 H 0.08 1.91 7.91 -52.49 -0.41 1.50 16 7 C 0.01 0.18 4.84 -17.43 -0.08 0.10 16 8 N -0.88 -24.05 9.49 55.49 0.53 -23.53 16 9 Si 0.90 20.73 29.61 -169.99 -5.03 15.70 16 10 H -0.29 -6.52 7.11 56.52 0.40 -6.12 16 11 H -0.29 -6.97 7.11 56.52 0.40 -6.57 16 12 H -0.28 -6.28 7.11 56.52 0.40 -5.88 16 13 C 0.18 3.24 5.82 -5.19 -0.03 3.21 16 14 C -0.06 -1.09 5.23 -104.62 -0.55 -1.64 16 15 C -0.08 -1.42 8.41 -39.46 -0.33 -1.75 16 16 C 0.04 0.75 7.15 -39.09 -0.28 0.47 16 17 C 0.01 0.25 6.94 -39.07 -0.27 -0.02 16 18 C -0.01 -0.23 6.33 -39.39 -0.25 -0.48 16 19 Cl -0.07 -1.18 28.96 -51.86 -1.50 -2.68 16 20 C -0.09 -1.59 9.47 -39.54 -0.37 -1.96 16 21 O -0.31 -5.04 11.40 -45.76 -0.52 -5.56 16 22 C 0.21 2.68 8.89 101.05 0.90 3.58 16 23 O -0.31 -5.02 11.40 -45.68 -0.52 -5.54 16 24 H 0.19 3.79 7.80 -54.10 -0.42 3.37 16 25 H 0.10 2.38 6.43 -51.93 -0.33 2.05 16 26 H 0.04 0.74 7.97 -51.93 -0.41 0.33 16 27 H 0.26 6.97 8.31 -40.82 -0.34 6.63 16 28 H 0.07 1.13 7.97 -51.93 -0.41 0.72 16 29 H 0.06 0.91 7.89 -51.93 -0.41 0.50 16 30 H 0.13 2.24 8.06 -52.49 -0.42 1.82 16 31 H 0.14 2.50 8.06 -52.49 -0.42 2.08 16 32 H 0.13 1.15 8.14 -51.93 -0.42 0.73 16 33 H 0.08 0.77 8.14 -51.93 -0.42 0.35 16 LS Contribution 308.83 15.07 4.65 4.65 Total: -1.00 -29.49 308.83 -7.35 -36.84 By element: Atomic # 1 Polarization: 4.72 SS G_CDS: -3.23 Total: 1.49 kcal Atomic # 6 Polarization: -6.95 SS G_CDS: -1.27 Total: -8.22 kcal Atomic # 7 Polarization: -36.76 SS G_CDS: 0.08 Total: -36.68 kcal Atomic # 8 Polarization: -10.06 SS G_CDS: -1.04 Total: -11.10 kcal Atomic # 14 Polarization: 20.73 SS G_CDS: -5.03 Total: 15.70 kcal Atomic # 17 Polarization: -1.18 SS G_CDS: -1.50 Total: -2.68 kcal Total LS contribution 4.65 Total: 4.65 kcal Total: -29.49 -7.35 -36.84 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491255056.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 84.231 kcal (2) G-P(sol) polarization free energy of solvation -29.493 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 54.738 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.345 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.838 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.393 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds