Wall clock time and date at job start Tue Mar 31 2020 06:48:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17404 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 N 1.46497 * 109.47322 * 333.82783 * 3 2 1 5 5 C 1.37090 * 120.00290 * 93.70003 * 4 3 2 6 6 H 1.08000 * 120.00251 * 154.85987 * 5 4 3 7 7 C 1.38950 * 120.00187 * 334.85500 * 5 4 3 8 8 N 1.31411 * 119.99821 * 353.98009 * 7 5 4 9 9 Si 1.86799 * 120.00406 * 173.98294 * 7 5 4 10 10 H 1.48500 * 109.46684 * 359.97438 * 9 7 5 11 11 H 1.48501 * 109.47067 * 119.99853 * 9 7 5 12 12 H 1.48497 * 109.47031 * 239.99943 * 9 7 5 13 13 C 1.34777 * 119.99602 * 273.69408 * 4 3 2 14 14 O 1.21294 * 120.00248 * 185.54004 * 13 4 3 15 15 C 1.50705 * 120.00266 * 5.55010 * 13 4 3 16 16 H 1.09000 * 109.47227 * 34.24788 * 15 13 4 17 17 O 1.42898 * 109.47295 * 154.25295 * 15 13 4 18 18 C 1.50703 * 109.46678 * 274.25149 * 15 13 4 19 19 C 1.38242 * 119.99015 * 114.48559 * 18 15 13 20 20 C 1.38206 * 120.01582 * 180.02562 * 19 18 15 21 21 C 1.38354 * 119.98954 * 0.25392 * 20 19 18 22 22 Cl 1.73592 * 120.01733 * 179.69934 * 21 20 19 23 23 C 1.38358 * 119.96837 * 359.42488 * 21 20 19 24 24 C 1.38216 * 119.98585 * 0.59979 * 23 21 20 25 25 H 4.40641 * 5.51434 * 180.02562 * 4 1 2 26 26 H 1.08997 * 109.47230 * 213.82191 * 3 2 1 27 27 H 1.09005 * 109.46891 * 93.82766 * 3 2 1 28 28 H 0.96998 * 120.00629 * 179.97438 * 8 7 5 29 29 H 0.96702 * 113.99880 * 59.99559 * 17 15 13 30 30 H 1.08002 * 119.99086 * 359.97438 * 19 18 15 31 31 H 1.08002 * 120.00549 * 179.97438 * 20 19 18 32 32 H 1.07995 * 120.00601 * 180.29578 * 23 21 20 33 33 H 1.07997 * 119.99074 * 179.72355 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1350 -1.2387 0.6092 5 6 3.4362 -2.3182 -0.1803 6 1 4.1475 -3.0555 0.1616 7 6 2.8263 -2.4639 -1.4202 8 7 1.8754 -1.6341 -1.7863 9 14 3.3580 -3.8394 -2.5669 10 1 4.4390 -4.6292 -1.9244 11 1 2.1991 -4.7239 -2.8496 12 1 3.8589 -3.2582 -3.8382 13 6 3.2887 -1.3175 1.9458 14 8 3.7873 -2.3057 2.4418 15 6 2.8409 -0.1778 2.8244 16 1 1.9517 0.2840 2.3953 17 8 2.5376 -0.6735 4.1299 18 6 3.9426 0.8461 2.9193 19 6 3.7604 2.1086 2.3863 20 6 4.7706 3.0478 2.4726 21 6 5.9665 2.7227 3.0878 22 17 7.2387 3.8994 3.1896 23 6 6.1458 1.4612 3.6269 24 6 5.1350 0.5226 3.5395 25 1 -1.0498 -0.0005 0.0000 26 1 3.0090 0.8545 0.5720 27 1 3.0093 0.0694 -1.0254 28 1 1.4498 -1.7355 -2.6520 29 1 3.2848 -1.0985 4.5726 30 1 2.8287 2.3607 1.9017 31 1 4.6283 4.0339 2.0558 32 1 7.0772 1.2083 4.1114 33 1 5.2765 -0.4636 3.9564 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491771631.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:48:54 Heat of formation + Delta-G solvation = 4.693444 kcal Electronic energy + Delta-G solvation = -21046.404385 eV Core-core repulsion = 17679.350350 eV Total energy + Delta-G solvation = -3367.054035 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 293.061 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -40.04697 -38.43036 -36.63387 -36.05649 -34.99170 -32.26726 -31.45230 -31.09775 -30.95266 -27.04301 -26.34829 -24.29896 -22.85721 -21.75843 -19.54226 -17.99616 -17.61458 -17.04950 -16.50419 -16.09194 -15.58489 -15.07615 -14.43021 -14.35032 -14.01642 -13.62253 -13.48772 -13.26544 -13.07186 -12.52519 -12.40461 -12.27896 -11.66181 -11.51633 -11.49051 -11.21961 -11.09976 -10.82565 -10.56978 -10.41364 -10.38071 -9.50524 -9.29896 -9.04900 -8.86448 -8.85661 -8.23420 -7.93124 -6.36070 -4.03477 1.09531 1.30260 2.08261 3.08124 3.20583 3.26378 3.48924 3.62531 3.79210 4.01045 4.12790 4.60212 4.77345 4.85564 4.88233 4.95555 5.07163 5.32813 5.33763 5.42199 5.64985 5.72432 5.75843 5.97319 6.18212 6.21133 6.22768 6.55823 6.71778 6.77391 7.01161 7.46172 7.81713 7.97295 8.30165 8.80210 9.00104 9.21348 9.71995 10.60837 Molecular weight = 293.06amu Principal moments of inertia in cm(-1) A = 0.017879 B = 0.004828 C = 0.004676 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1565.701463 B = 5797.733899 C = 5986.555473 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.261 4.261 2 C -0.110 4.110 3 C 0.228 3.772 4 N -0.430 5.430 5 C -0.312 4.312 6 H 0.103 0.897 7 C 0.032 3.968 8 N -0.869 5.869 9 Si 0.929 3.071 10 H -0.268 1.268 11 H -0.281 1.281 12 H -0.280 1.280 13 C 0.432 3.568 14 O -0.576 6.576 15 C 0.133 3.867 16 H 0.120 0.880 17 O -0.536 6.536 18 C -0.098 4.098 19 C -0.095 4.095 20 C -0.109 4.109 21 C -0.036 4.036 22 Cl -0.079 7.079 23 C -0.108 4.108 24 C -0.089 4.089 25 H 0.199 0.801 26 H 0.061 0.939 27 H 0.112 0.888 28 H 0.270 0.730 29 H 0.378 0.622 30 H 0.137 0.863 31 H 0.134 0.866 32 H 0.133 0.867 33 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.391 10.488 5.944 12.830 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.280 4.280 2 C -0.112 4.112 3 C 0.106 3.894 4 N -0.149 5.149 5 C -0.440 4.440 6 H 0.120 0.880 7 C -0.172 4.172 8 N -0.507 5.507 9 Si 0.756 3.244 10 H -0.192 1.192 11 H -0.207 1.207 12 H -0.206 1.206 13 C 0.219 3.781 14 O -0.461 6.461 15 C 0.070 3.930 16 H 0.138 0.862 17 O -0.341 6.341 18 C -0.099 4.099 19 C -0.113 4.113 20 C -0.128 4.128 21 C -0.062 4.062 22 Cl -0.050 7.050 23 C -0.127 4.127 24 C -0.107 4.107 25 H 0.216 0.784 26 H 0.079 0.921 27 H 0.130 0.870 28 H 0.081 0.919 29 H 0.227 0.773 30 H 0.155 0.845 31 H 0.152 0.848 32 H 0.151 0.849 33 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 4.081 10.344 5.860 12.569 hybrid contribution 0.446 -0.747 -0.805 1.185 sum 4.528 9.597 5.055 11.754 Atomic orbital electron populations 1.24255 0.95356 1.03366 1.05003 1.23013 0.94197 0.97419 0.96591 1.18432 0.84471 0.85827 1.00715 1.43638 1.55582 1.11769 1.03893 1.19726 1.23572 1.02539 0.98116 0.87957 1.25429 0.94812 0.98335 0.98584 1.69913 1.22552 1.36638 1.21553 0.85812 0.78672 0.80487 0.79471 1.19198 1.20656 1.20600 1.20629 0.85392 0.88894 0.83188 1.90523 1.48396 1.33917 1.73226 1.20810 0.96385 0.90919 0.84882 0.86246 1.86564 1.41153 1.78624 1.27810 1.20568 0.96166 0.95151 0.98039 1.21055 0.99267 0.92109 0.98898 1.20992 0.91793 1.00399 0.99628 1.20916 0.90664 0.91248 1.03385 1.98354 1.51311 1.58161 1.97189 1.20992 0.99927 0.91560 1.00202 1.21003 0.92061 0.99449 0.98219 0.78416 0.92137 0.86979 0.91939 0.77279 0.84524 0.84785 0.84911 0.84619 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.26 -5.28 19.24 29.55 0.57 -4.71 16 2 C -0.11 -2.40 10.01 -37.12 -0.37 -2.77 16 3 C 0.23 4.89 4.80 -6.83 -0.03 4.86 16 4 N -0.43 -10.53 2.59 -117.94 -0.31 -10.84 16 5 C -0.31 -8.35 9.28 -14.94 -0.14 -8.49 16 6 H 0.10 2.87 7.40 -52.49 -0.39 2.49 16 7 C 0.03 0.82 5.19 -17.47 -0.09 0.73 16 8 N -0.87 -22.12 8.83 55.50 0.49 -21.63 16 9 Si 0.93 20.26 29.56 -169.99 -5.02 15.23 16 10 H -0.27 -5.87 7.11 56.52 0.40 -5.47 16 11 H -0.28 -6.18 7.11 56.52 0.40 -5.78 16 12 H -0.28 -5.96 7.11 56.52 0.40 -5.55 16 13 C 0.43 10.09 6.55 -10.98 -0.07 10.02 16 14 O -0.58 -15.08 16.09 -12.90 -0.21 -15.29 16 15 C 0.13 2.48 2.85 -29.03 -0.08 2.40 16 16 H 0.12 2.22 6.02 -51.93 -0.31 1.91 16 17 O -0.54 -9.81 13.13 -53.68 -0.71 -10.51 16 18 C -0.10 -1.55 4.59 -104.62 -0.48 -2.03 16 19 C -0.09 -1.30 8.12 -39.59 -0.32 -1.62 16 20 C -0.11 -1.35 9.83 -39.55 -0.39 -1.74 16 21 C -0.04 -0.45 6.32 -39.49 -0.25 -0.70 16 22 Cl -0.08 -0.90 28.96 -51.86 -1.50 -2.40 16 23 C -0.11 -1.41 9.83 -39.55 -0.39 -1.79 16 24 C -0.09 -1.31 9.04 -39.59 -0.36 -1.67 16 25 H 0.20 3.28 7.80 -54.10 -0.42 2.86 16 26 H 0.06 1.09 4.28 -51.93 -0.22 0.86 16 27 H 0.11 2.56 6.68 -51.93 -0.35 2.21 16 28 H 0.27 6.60 8.31 -40.82 -0.34 6.26 16 29 H 0.38 5.99 7.66 45.56 0.35 6.34 16 30 H 0.14 1.65 7.34 -52.49 -0.39 1.27 16 31 H 0.13 1.35 8.06 -52.49 -0.42 0.93 16 32 H 0.13 1.45 8.06 -52.49 -0.42 1.03 16 33 H 0.14 1.96 7.47 -52.49 -0.39 1.57 16 LS Contribution 305.19 15.07 4.60 4.60 Total: -1.00 -30.25 305.19 -7.16 -37.42 By element: Atomic # 1 Polarization: 13.02 SS G_CDS: -2.10 Total: 10.92 kcal Atomic # 6 Polarization: -5.10 SS G_CDS: -2.41 Total: -7.51 kcal Atomic # 7 Polarization: -32.65 SS G_CDS: 0.19 Total: -32.47 kcal Atomic # 8 Polarization: -24.89 SS G_CDS: -0.91 Total: -25.80 kcal Atomic # 14 Polarization: 20.26 SS G_CDS: -5.02 Total: 15.23 kcal Atomic # 17 Polarization: -0.90 SS G_CDS: -1.50 Total: -2.40 kcal Total LS contribution 4.60 Total: 4.60 kcal Total: -30.25 -7.16 -37.42 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491771631.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.109 kcal (2) G-P(sol) polarization free energy of solvation -30.254 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.854 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.161 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.415 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.693 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds