Wall clock time and date at job start Tue Mar 31 2020 07:04:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13596 * 1 3 3 C 1.43199 * 179.97438 * 2 1 4 4 N 1.32977 * 119.70665 * 8.88816 * 3 2 1 5 5 C 1.32083 * 121.52580 * 180.28538 * 4 3 2 6 6 N 1.39029 * 119.61259 * 179.71645 * 5 4 3 7 7 C 1.47899 * 110.99987 * 119.85511 * 6 5 4 8 8 C 1.53997 * 107.05889 * 145.84009 * 7 6 5 9 9 C 1.54593 * 105.13807 * 358.77516 * 8 7 6 10 10 O 1.42904 * 110.72258 * 96.40366 * 9 8 7 11 11 C 1.50705 * 110.72583 * 219.68092 * 9 8 7 12 12 H 1.07993 * 119.99953 * 118.54560 * 11 9 8 13 13 C 1.37878 * 119.99835 * 298.55374 * 11 9 8 14 14 N 1.31514 * 120.00255 * 359.97438 * 13 11 9 15 15 Si 1.86799 * 119.99873 * 179.97438 * 13 11 9 16 16 H 1.48511 * 109.47020 * 359.97438 * 15 13 11 17 17 H 1.48500 * 109.47273 * 119.99517 * 15 13 11 18 18 H 1.48497 * 109.47130 * 239.99689 * 15 13 11 19 19 C 1.48538 * 110.99863 * 237.25137 * 6 5 4 20 20 C 1.39426 * 120.77005 * 359.44176 * 5 4 3 21 21 C 1.38291 * 119.33838 * 0.27186 * 20 5 4 22 22 C 1.38877 * 118.58603 * 0.02562 * 21 20 5 23 23 Cl 1.73606 * 120.40203 * 179.97438 * 22 21 20 24 24 H 1.09004 * 109.91646 * 26.49036 * 7 6 5 25 25 H 1.09001 * 110.08341 * 265.28712 * 7 6 5 26 26 H 1.09004 * 110.30998 * 117.69119 * 8 7 6 27 27 H 1.08998 * 110.30811 * 239.85930 * 8 7 6 28 28 H 0.96700 * 114.00523 * 61.45046 * 10 9 8 29 29 H 0.96994 * 120.00103 * 180.02562 * 14 13 11 30 30 H 1.09007 * 110.66246 * 318.71433 * 19 6 5 31 31 H 1.08993 * 110.66698 * 81.84127 * 19 6 5 32 32 H 1.08002 * 120.33305 * 180.25546 * 20 5 4 33 33 H 1.07998 * 120.70295 * 179.97438 * 21 20 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 7 3.2274 -1.1402 -0.1785 5 6 4.5476 -1.1819 -0.1794 6 7 5.1964 -2.3976 -0.3637 7 6 6.0566 -2.3624 -1.5664 8 6 7.2887 -3.2361 -1.2663 9 6 7.0856 -3.7366 0.1822 10 8 6.5033 -5.0416 0.1893 11 6 8.3900 -3.7290 0.9369 12 1 8.5017 -3.1117 1.8159 13 6 9.4409 -4.5102 0.5050 14 7 9.3048 -5.2622 -0.5653 15 14 11.0580 -4.5003 1.4401 16 1 10.9542 -3.5769 2.5986 17 1 11.3579 -5.8715 1.9247 18 1 12.1474 -4.0440 0.5400 19 6 6.1035 -2.6948 0.7743 20 6 5.2981 -0.0201 -0.0034 21 6 4.6468 1.1860 0.1795 22 6 3.2581 1.1977 0.1819 23 17 2.3924 2.6854 0.4081 24 1 6.3685 -1.3379 -1.7698 25 1 5.5170 -2.7634 -2.4244 26 1 7.3313 -4.0795 -1.9555 27 1 8.1999 -2.6422 -1.3371 28 1 7.0458 -5.7168 -0.2408 29 1 10.0440 -5.8120 -0.8689 30 1 6.6370 -1.7967 1.0857 31 1 5.5468 -3.1215 1.6086 32 1 6.3773 -0.0618 -0.0094 33 1 5.2063 2.0993 0.3183 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000591976071.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:04:16 Heat of formation + Delta-G solvation = 34.890405 kcal Electronic energy + Delta-G solvation = -20557.220069 eV Core-core repulsion = 17223.768224 eV Total energy + Delta-G solvation = -3333.451845 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 293.067 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -40.97209 -38.54968 -36.99012 -36.64994 -34.91087 -32.93686 -32.23227 -31.39445 -28.68440 -28.27368 -25.16941 -24.97564 -23.05549 -21.08871 -19.76874 -19.20146 -17.60761 -16.96411 -16.80250 -15.95967 -15.28325 -15.01013 -14.73443 -14.09419 -13.98195 -13.51257 -13.40844 -13.14347 -12.99865 -12.98607 -12.50501 -12.36843 -12.13270 -11.70786 -11.55324 -11.41110 -11.19530 -10.88468 -10.64606 -10.49376 -10.22137 -10.15578 -9.93314 -9.40327 -8.97072 -8.70842 -8.27689 -8.12317 -6.32227 -4.41571 0.15839 0.74490 1.57120 2.28750 2.55998 3.12932 3.14386 3.24425 3.27040 3.52064 3.89808 4.22441 4.36926 4.49369 4.68644 4.95170 4.99450 5.30237 5.46049 5.53661 5.66310 5.70928 5.85575 5.92703 6.18348 6.35803 6.65039 6.80429 7.05785 7.07809 7.20953 7.29552 7.36218 7.68766 7.80120 8.01371 8.61357 9.28275 9.43765 10.74864 Molecular weight = 293.07amu Principal moments of inertia in cm(-1) A = 0.030105 B = 0.003730 C = 0.003498 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 929.855478 B = 7505.588248 C = 8002.893098 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.377 5.377 2 C 0.269 3.731 3 C 0.214 3.786 4 N -0.422 5.422 5 C 0.334 3.666 6 N -0.480 5.480 7 C 0.045 3.955 8 C -0.130 4.130 9 C 0.260 3.740 10 O -0.578 6.578 11 C -0.541 4.541 12 H 0.063 0.937 13 C 0.073 3.927 14 N -0.891 5.891 15 Si 0.900 3.100 16 H -0.272 1.272 17 H -0.282 1.282 18 H -0.283 1.283 19 C 0.060 3.940 20 C -0.161 4.161 21 C -0.053 4.053 22 C -0.061 4.061 23 Cl -0.043 7.043 24 H 0.039 0.961 25 H 0.074 0.926 26 H 0.074 0.926 27 H 0.068 0.932 28 H 0.379 0.621 29 H 0.268 0.732 30 H 0.057 0.943 31 H 0.082 0.918 32 H 0.158 0.842 33 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.682 13.213 -0.736 14.038 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.054 5.054 2 C -0.049 4.049 3 C 0.074 3.926 4 N -0.133 5.133 5 C 0.101 3.899 6 N -0.203 5.203 7 C -0.081 4.081 8 C -0.168 4.168 9 C 0.219 3.781 10 O -0.386 6.386 11 C -0.579 4.579 12 H 0.082 0.918 13 C -0.130 4.130 14 N -0.530 5.530 15 Si 0.727 3.273 16 H -0.196 1.196 17 H -0.207 1.207 18 H -0.209 1.209 19 C -0.065 4.065 20 C -0.185 4.185 21 C -0.080 4.080 22 C -0.093 4.093 23 Cl -0.014 7.014 24 H 0.057 0.943 25 H 0.092 0.908 26 H 0.092 0.908 27 H 0.087 0.913 28 H 0.229 0.771 29 H 0.078 0.922 30 H 0.075 0.925 31 H 0.100 0.900 32 H 0.176 0.824 33 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -7.778 12.339 -0.701 14.603 hybrid contribution 2.826 1.132 0.291 3.058 sum -4.953 13.470 -0.410 14.358 Atomic orbital electron populations 1.81197 1.11182 1.06463 1.06545 1.24719 0.91435 0.94024 0.94736 1.16000 0.86551 0.88193 1.01856 1.67397 1.10219 1.25004 1.10670 1.20134 0.88131 0.90312 0.91318 1.61739 1.28803 1.24256 1.05515 1.23109 0.94386 0.99263 0.91385 1.23004 0.93861 0.98897 1.01079 1.19299 0.88333 0.80818 0.89624 1.86166 1.50276 1.19563 1.82567 1.21569 0.96536 1.27084 1.12754 0.91850 1.24986 0.98970 0.94452 0.94557 1.69730 1.32961 1.27168 1.23170 0.86418 0.82827 0.78155 0.79888 1.19643 1.20738 1.20868 1.23456 0.92553 0.98571 0.91894 1.23125 1.03478 0.92732 0.99184 1.21411 0.91086 0.99691 0.95790 1.21853 0.93626 0.87857 1.05990 1.98404 1.76211 1.31676 1.95151 0.94276 0.90766 0.90759 0.91328 0.77094 0.92233 0.92494 0.89997 0.82419 0.82538 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.38 -5.72 18.54 41.84 0.78 -4.94 16 2 C 0.27 3.81 14.57 -22.48 -0.33 3.48 16 3 C 0.21 2.90 6.58 -85.03 -0.56 2.34 16 4 N -0.42 -6.74 10.31 -10.30 -0.11 -6.84 16 5 C 0.33 5.16 5.84 -155.15 -0.91 4.25 16 6 N -0.48 -8.71 5.36 -169.22 -0.91 -9.62 16 7 C 0.04 0.76 6.50 -2.75 -0.02 0.75 16 8 C -0.13 -2.64 5.26 -25.37 -0.13 -2.77 16 9 C 0.26 5.87 0.95 -89.91 -0.09 5.78 16 10 O -0.58 -14.28 13.09 -35.23 -0.46 -14.75 16 11 C -0.54 -13.19 8.14 -34.44 -0.28 -13.47 16 12 H 0.06 1.53 7.78 -52.49 -0.41 1.12 16 13 C 0.07 1.80 5.28 -17.82 -0.09 1.70 16 14 N -0.89 -22.16 11.02 55.43 0.61 -21.55 16 15 Si 0.90 19.23 29.54 -169.99 -5.02 14.21 16 16 H -0.27 -5.77 7.11 56.52 0.40 -5.37 16 17 H -0.28 -6.11 7.11 56.52 0.40 -5.71 16 18 H -0.28 -6.01 7.11 56.52 0.40 -5.61 16 19 C 0.06 1.18 5.53 -1.90 -0.01 1.17 16 20 C -0.16 -1.90 7.88 -39.12 -0.31 -2.21 16 21 C -0.05 -0.51 9.96 -39.33 -0.39 -0.90 16 22 C -0.06 -0.67 6.36 -38.93 -0.25 -0.92 16 23 Cl -0.04 -0.43 28.03 -51.86 -1.45 -1.88 16 24 H 0.04 0.57 6.66 -51.93 -0.35 0.22 16 25 H 0.07 1.25 8.14 -51.93 -0.42 0.83 16 26 H 0.07 1.62 7.99 -51.93 -0.41 1.21 16 27 H 0.07 1.42 7.84 -51.93 -0.41 1.01 16 28 H 0.38 9.45 7.48 45.56 0.34 9.79 16 29 H 0.27 6.40 8.31 -40.82 -0.34 6.06 16 30 H 0.06 0.99 6.51 -51.93 -0.34 0.65 16 31 H 0.08 1.67 8.14 -51.93 -0.42 1.25 16 32 H 0.16 1.68 7.03 -52.49 -0.37 1.31 16 33 H 0.16 0.98 8.06 -52.49 -0.42 0.56 16 LS Contribution 304.02 15.07 4.58 4.58 Total: -1.00 -26.58 304.02 -7.69 -34.27 By element: Atomic # 1 Polarization: 9.66 SS G_CDS: -2.34 Total: 7.32 kcal Atomic # 6 Polarization: 2.56 SS G_CDS: -3.36 Total: -0.80 kcal Atomic # 7 Polarization: -43.32 SS G_CDS: 0.37 Total: -42.95 kcal Atomic # 8 Polarization: -14.28 SS G_CDS: -0.46 Total: -14.75 kcal Atomic # 14 Polarization: 19.23 SS G_CDS: -5.02 Total: 14.21 kcal Atomic # 17 Polarization: -0.43 SS G_CDS: -1.45 Total: -1.88 kcal Total LS contribution 4.58 Total: 4.58 kcal Total: -26.58 -7.69 -34.27 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000591976071.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 69.160 kcal (2) G-P(sol) polarization free energy of solvation -26.579 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.581 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.691 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.269 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.890 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds