Wall clock time and date at job start Tue Mar 31 2020 07:13:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 N 1.27576 * 126.41846 * 2 1 4 4 N 1.39146 * 113.16356 * 180.22105 * 3 2 1 5 5 C 1.39575 * 124.43621 * 179.76935 * 4 3 2 6 6 N 1.32374 * 119.69863 * 180.02562 * 5 4 3 7 7 C 1.31902 * 121.64761 * 180.31416 * 6 5 4 8 8 C 1.38130 * 120.86923 * 359.66331 * 7 6 5 9 9 C 1.38793 * 119.32136 * 0.02562 * 8 7 6 10 10 C 1.38504 * 118.48210 * 0.02562 * 9 8 7 11 11 Cl 1.73599 * 120.45779 * 179.97438 * 10 9 8 12 12 C 1.34954 * 111.12527 * 359.51154 * 4 3 2 13 13 O 1.21282 * 127.50171 * 180.26373 * 12 4 3 14 14 C 1.51445 * 126.41978 * 179.71290 * 2 1 3 15 15 H 1.09008 * 110.73524 * 298.54100 * 14 2 1 16 16 C 1.52996 * 110.60735 * 61.44339 * 14 2 1 17 17 C 1.50701 * 109.47174 * 180.58479 * 16 14 2 18 18 H 1.07996 * 119.99916 * 0.02562 * 17 16 14 19 19 C 1.37879 * 119.99762 * 180.02562 * 17 16 14 20 20 N 1.31514 * 119.99544 * 179.97438 * 19 17 16 21 21 Si 1.86798 * 120.00290 * 359.97438 * 19 17 16 22 22 H 1.48500 * 109.46952 * 90.00107 * 21 19 17 23 23 H 1.48497 * 109.47060 * 210.00342 * 21 19 17 24 24 H 1.48504 * 109.46943 * 330.00138 * 21 19 17 25 25 H 1.09005 * 109.46944 * 270.29095 * 1 2 3 26 26 H 1.09000 * 109.47522 * 30.28605 * 1 2 3 27 27 H 1.09001 * 109.47150 * 150.29346 * 1 2 3 28 28 H 1.08000 * 119.56511 * 179.68349 * 7 6 5 29 29 H 1.08002 * 120.34185 * 180.02562 * 8 7 6 30 30 H 1.07998 * 120.75693 * 179.97438 * 9 8 7 31 31 H 1.08997 * 109.47230 * 300.58621 * 16 14 2 32 32 H 1.09001 * 109.46900 * 60.58509 * 16 14 2 33 33 H 0.97007 * 119.99870 * 179.97438 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 7 2.2643 1.0266 0.0000 4 7 3.6187 0.7076 -0.0049 5 6 4.6509 1.6471 -0.0106 6 7 5.9099 1.2382 -0.0155 7 6 6.9150 2.0924 -0.0148 8 6 6.6872 3.4548 -0.0159 9 6 5.3816 3.9256 -0.0171 10 6 4.3473 3.0045 -0.0167 11 17 2.6949 3.5368 -0.0176 12 6 3.8036 -0.6292 0.0022 13 8 4.8578 -1.2288 0.0049 14 6 2.4061 -1.2186 0.0061 15 1 2.2432 -1.8139 0.9047 16 6 2.1749 -2.0647 -1.2475 17 6 3.0706 -3.2760 -1.2083 18 1 3.7377 -3.4274 -0.3726 19 6 3.0384 -4.1908 -2.2394 20 7 3.8205 -5.2476 -2.2054 21 14 1.8841 -3.9292 -3.6845 22 1 2.5774 -3.1420 -4.7356 23 1 1.4785 -5.2458 -4.2387 24 1 0.6787 -3.1917 -3.2279 25 1 -0.3633 0.0052 1.0277 26 1 -0.3634 0.8874 -0.5183 27 1 -0.3633 -0.8926 -0.5093 28 1 7.9294 1.7217 -0.0138 29 1 7.5166 4.1466 -0.0157 30 1 5.1769 4.9860 -0.0175 31 1 1.1334 -2.3840 -1.2834 32 1 2.4039 -1.4719 -2.1331 33 1 3.7976 -5.8914 -2.9306 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000601933048.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:13:05 Heat of formation + Delta-G solvation = 71.493943 kcal Electronic energy + Delta-G solvation = -20958.301818 eV Core-core repulsion = 17626.437221 eV Total energy + Delta-G solvation = -3331.864597 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 293.067 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -41.37156 -39.84679 -36.99127 -36.39680 -34.58072 -32.95793 -32.30899 -30.84748 -30.48248 -27.92907 -26.59636 -24.05554 -23.34414 -21.86400 -20.09533 -19.67508 -17.95833 -16.70029 -16.65949 -16.16492 -16.00868 -15.06342 -14.66556 -14.47630 -14.32297 -13.78753 -13.42093 -13.39020 -13.32200 -12.68784 -12.62494 -12.32670 -12.08420 -11.91008 -11.72958 -11.67671 -11.26995 -10.64005 -10.61963 -10.07819 -9.97678 -9.87107 -9.60569 -9.43588 -9.37328 -8.75605 -8.55835 -7.92998 -6.04684 -4.04674 0.85175 1.06273 1.95347 2.16530 2.27155 3.03601 3.27285 3.33653 3.35198 3.80778 4.05075 4.38745 4.40611 4.53547 4.66488 4.80656 4.89787 5.21572 5.26355 5.30608 5.54163 5.61086 5.66940 5.79158 5.84044 5.91340 6.07506 6.23616 6.42098 6.73051 6.84784 6.98445 7.57998 7.62758 8.07356 8.38396 8.48142 9.05812 9.53665 11.08456 Molecular weight = 293.07amu Principal moments of inertia in cm(-1) A = 0.018966 B = 0.005525 C = 0.004683 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1475.944548 B = 5066.599346 C = 5977.808236 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 C 0.111 3.889 3 N -0.235 5.235 4 N -0.424 5.424 5 C 0.407 3.593 6 N -0.480 5.480 7 C 0.140 3.860 8 C -0.200 4.200 9 C -0.046 4.046 10 C -0.112 4.112 11 Cl -0.028 7.028 12 C 0.506 3.494 13 O -0.418 6.418 14 C -0.120 4.120 15 H 0.133 0.867 16 C 0.018 3.982 17 C -0.522 4.522 18 H 0.085 0.915 19 C 0.073 3.927 20 N -0.894 5.894 21 Si 0.872 3.128 22 H -0.278 1.278 23 H -0.285 1.285 24 H -0.264 1.264 25 H 0.089 0.911 26 H 0.081 0.919 27 H 0.093 0.907 28 H 0.168 0.832 29 H 0.144 0.856 30 H 0.146 0.854 31 H 0.040 0.960 32 H 0.015 0.985 33 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.073 19.391 5.287 20.332 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.081 4.081 3 N -0.041 5.041 4 N -0.236 5.236 5 C 0.176 3.824 6 N -0.195 5.195 7 C -0.018 4.018 8 C -0.222 4.222 9 C -0.073 4.073 10 C -0.145 4.145 11 Cl 0.001 6.999 12 C 0.293 3.707 13 O -0.280 6.280 14 C -0.144 4.144 15 H 0.151 0.849 16 C -0.021 4.021 17 C -0.560 4.560 18 H 0.103 0.897 19 C -0.129 4.129 20 N -0.533 5.533 21 Si 0.699 3.301 22 H -0.204 1.204 23 H -0.211 1.211 24 H -0.189 1.189 25 H 0.107 0.893 26 H 0.100 0.900 27 H 0.111 0.889 28 H 0.185 0.815 29 H 0.162 0.838 30 H 0.164 0.836 31 H 0.058 0.942 32 H 0.033 0.967 33 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -2.200 18.955 5.190 19.775 hybrid contribution -0.576 0.204 -0.909 1.095 sum -2.775 19.159 4.281 19.827 Atomic orbital electron populations 1.20381 0.84634 1.04607 1.03893 1.25835 0.97727 0.92008 0.92566 1.75335 0.86552 1.25161 1.17080 1.47363 1.02466 1.05826 1.67913 1.17828 0.86332 0.84724 0.93484 1.67395 0.97210 1.39104 1.15779 1.22712 0.97559 0.89091 0.92454 1.22039 0.96959 0.97134 1.06028 1.21371 0.91091 0.99731 0.95084 1.21397 0.88767 0.92504 1.11835 1.98372 1.15408 1.89411 1.96739 1.21578 0.92347 0.80926 0.75887 1.90805 1.30759 1.64471 1.41933 1.21868 0.90388 0.95976 1.06182 0.84935 1.19392 0.98885 0.94768 0.89038 1.21041 1.22321 1.04033 1.08587 0.89746 1.24943 0.95309 0.94962 0.97713 1.69905 1.38482 1.11959 1.32906 0.86909 0.81953 0.77743 0.83467 1.20381 1.21078 1.18867 0.89257 0.90033 0.88854 0.81522 0.83822 0.83615 0.94209 0.96720 0.92634 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.81 10.49 36.00 0.38 -0.43 16 2 C 0.11 1.75 6.93 -78.72 -0.55 1.20 16 3 N -0.23 -4.01 8.58 35.54 0.30 -3.71 16 4 N -0.42 -8.43 3.71 -11.01 -0.04 -8.47 16 5 C 0.41 7.48 7.51 -154.50 -1.16 6.32 16 6 N -0.48 -8.90 8.91 -12.30 -0.11 -9.01 16 7 C 0.14 1.86 11.18 -17.56 -0.20 1.66 16 8 C -0.20 -2.05 10.11 -39.42 -0.40 -2.45 16 9 C -0.05 -0.52 9.97 -39.28 -0.39 -0.91 16 10 C -0.11 -1.67 6.36 -39.17 -0.25 -1.91 16 11 Cl -0.03 -0.39 25.77 -51.86 -1.34 -1.72 16 12 C 0.51 11.48 7.49 -10.43 -0.08 11.40 16 13 O -0.42 -11.07 15.58 5.56 0.09 -10.99 16 14 C -0.12 -2.38 3.01 -92.08 -0.28 -2.65 16 15 H 0.13 2.45 8.14 -51.92 -0.42 2.03 16 16 C 0.02 0.40 3.57 -27.88 -0.10 0.30 16 17 C -0.52 -14.85 8.91 -34.44 -0.31 -15.16 16 18 H 0.08 2.68 7.30 -52.49 -0.38 2.29 16 19 C 0.07 2.12 5.47 -17.82 -0.10 2.02 16 20 N -0.89 -27.88 13.96 55.43 0.77 -27.11 16 21 Si 0.87 21.29 27.47 -169.99 -4.67 16.62 16 22 H -0.28 -6.86 7.11 56.52 0.40 -6.46 16 23 H -0.28 -6.87 7.11 56.52 0.40 -6.47 16 24 H -0.26 -5.90 6.54 56.52 0.37 -5.53 16 25 H 0.09 0.73 8.14 -51.93 -0.42 0.31 16 26 H 0.08 0.75 8.14 -51.93 -0.42 0.33 16 27 H 0.09 0.95 7.56 -51.93 -0.39 0.56 16 28 H 0.17 1.69 8.06 -52.49 -0.42 1.26 16 29 H 0.14 0.92 8.06 -52.49 -0.42 0.50 16 30 H 0.15 1.16 8.06 -52.49 -0.42 0.74 16 31 H 0.04 0.84 6.64 -51.93 -0.34 0.49 16 32 H 0.01 0.35 7.57 -51.93 -0.39 -0.04 16 33 H 0.26 7.67 8.31 -40.82 -0.34 7.33 16 LS Contribution 301.71 15.07 4.55 4.55 Total: -1.00 -36.02 301.71 -7.08 -43.10 By element: Atomic # 1 Polarization: 0.56 SS G_CDS: -3.22 Total: -2.66 kcal Atomic # 6 Polarization: 2.82 SS G_CDS: -3.42 Total: -0.60 kcal Atomic # 7 Polarization: -49.23 SS G_CDS: 0.93 Total: -48.30 kcal Atomic # 8 Polarization: -11.07 SS G_CDS: 0.09 Total: -10.99 kcal Atomic # 14 Polarization: 21.29 SS G_CDS: -4.67 Total: 16.62 kcal Atomic # 17 Polarization: -0.39 SS G_CDS: -1.34 Total: -1.72 kcal Total LS contribution 4.55 Total: 4.55 kcal Total: -36.02 -7.08 -43.10 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000601933048.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 114.599 kcal (2) G-P(sol) polarization free energy of solvation -36.020 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 78.579 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.085 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.105 kcal (6) G-S(sol) free energy of system = (1) + (5) 71.494 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds