Wall clock time and date at job start Tue Mar 31 2020 07:13:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 N 1.27574 * 126.41945 * 2 1 4 4 N 1.39147 * 113.16421 * 180.02562 * 3 2 1 5 5 C 1.39575 * 124.43337 * 179.97438 * 4 3 2 6 6 N 1.32373 * 119.69528 * 180.02562 * 5 4 3 7 7 C 1.31899 * 121.64413 * 179.97438 * 6 5 4 8 8 C 1.38129 * 120.87483 * 359.97438 * 7 6 5 9 9 C 1.38783 * 119.31857 * 0.02562 * 8 7 6 10 10 C 1.38506 * 118.48282 * 359.75079 * 9 8 7 11 11 Cl 1.73599 * 120.46034 * 180.24232 * 10 9 8 12 12 C 1.34949 * 111.12471 * 0.26096 * 4 3 2 13 13 O 1.21288 * 127.50151 * 179.71908 * 12 4 3 14 14 C 1.51449 * 126.41822 * 180.02562 * 2 1 3 15 15 H 1.09004 * 110.60382 * 61.29173 * 14 2 1 16 16 C 1.52994 * 110.60763 * 298.48478 * 14 2 1 17 17 C 1.50696 * 109.47232 * 174.99905 * 16 14 2 18 18 H 1.08006 * 119.99858 * 359.97438 * 17 16 14 19 19 C 1.37873 * 120.00548 * 180.02562 * 17 16 14 20 20 N 1.31516 * 119.99769 * 359.97438 * 19 17 16 21 21 Si 1.86801 * 120.00450 * 180.02562 * 19 17 16 22 22 H 1.48498 * 109.47485 * 89.99271 * 21 19 17 23 23 H 1.48499 * 109.46920 * 209.99715 * 21 19 17 24 24 H 1.48499 * 109.46913 * 329.99519 * 21 19 17 25 25 H 1.09003 * 109.47332 * 359.97438 * 1 2 3 26 26 H 1.09002 * 109.47399 * 119.98428 * 1 2 3 27 27 H 1.09012 * 109.47306 * 239.97879 * 1 2 3 28 28 H 1.08005 * 119.56034 * 179.97438 * 7 6 5 29 29 H 1.07999 * 120.34015 * 180.02562 * 8 7 6 30 30 H 1.08008 * 120.75917 * 179.97438 * 9 8 7 31 31 H 1.09001 * 109.47487 * 294.99529 * 16 14 2 32 32 H 1.09002 * 109.47764 * 54.99889 * 16 14 2 33 33 H 0.97002 * 119.99813 * 180.02562 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 7 2.2643 1.0266 0.0000 4 7 3.6187 0.7075 -0.0006 5 6 4.6509 1.6471 -0.0012 6 7 5.9099 1.2382 -0.0022 7 6 6.9149 2.0924 -0.0034 8 6 6.6872 3.4548 -0.0041 9 6 5.3817 3.9256 -0.0030 10 6 4.3473 3.0045 -0.0066 11 17 2.6949 3.5367 -0.0118 12 6 3.8035 -0.6292 -0.0067 13 8 4.8577 -1.2289 -0.0135 14 6 2.4060 -1.2187 -0.0005 15 1 2.2394 -1.8180 -0.8957 16 6 2.1761 -2.0581 1.2578 17 6 2.9907 -3.3231 1.1736 18 1 3.6102 -3.5099 0.3087 19 6 2.9445 -4.2425 2.1999 20 7 2.1899 -4.0153 3.2528 21 14 3.9548 -5.8103 2.0959 22 1 5.2928 -5.5778 2.6967 23 1 3.2619 -6.8957 2.8354 24 1 4.1130 -6.2036 0.6727 25 1 -0.3634 1.0277 0.0005 26 1 -0.3634 -0.5136 -0.8901 27 1 -0.3634 -0.5142 0.8899 28 1 7.9293 1.7216 -0.0038 29 1 7.5166 4.1465 -0.0054 30 1 5.1769 4.9861 -0.0031 31 1 2.4803 -1.4879 2.1355 32 1 1.1190 -2.3114 1.3376 33 1 2.1576 -4.6620 3.9751 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000601933049.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:13:07 Heat of formation + Delta-G solvation = 65.844757 kcal Electronic energy + Delta-G solvation = -20889.678046 eV Core-core repulsion = 17557.568482 eV Total energy + Delta-G solvation = -3332.109564 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 293.067 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -41.30314 -39.80366 -36.94801 -36.35520 -34.49663 -33.01153 -32.28231 -30.50973 -30.40775 -27.84406 -26.20874 -24.05054 -23.33490 -22.13161 -20.09803 -19.63481 -17.84392 -16.63999 -16.50342 -16.08806 -15.80698 -15.03231 -14.63651 -14.48652 -14.35722 -13.73615 -13.38375 -13.30323 -13.23654 -12.64411 -12.36790 -12.22278 -11.87508 -11.71006 -11.61403 -11.55322 -11.07010 -10.70247 -10.67835 -10.19947 -9.94099 -9.81024 -9.55399 -9.37555 -9.29830 -8.74189 -8.39331 -7.88235 -6.05754 -4.07526 0.87840 1.08591 2.04979 2.20728 2.33165 3.06813 3.34965 3.40823 3.45632 3.83762 4.11722 4.42006 4.51864 4.57056 4.72177 4.84111 4.93616 5.27685 5.30839 5.35654 5.65147 5.68056 5.77732 5.85489 5.91806 6.04330 6.16584 6.34599 6.53323 6.78026 7.35070 7.40494 7.63580 7.92115 8.11464 8.23763 8.41641 8.97107 9.57398 11.05439 Molecular weight = 293.07amu Principal moments of inertia in cm(-1) A = 0.019236 B = 0.005280 C = 0.004360 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1455.289781 B = 5301.336268 C = 6419.808904 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 C 0.118 3.882 3 N -0.239 5.239 4 N -0.423 5.423 5 C 0.407 3.593 6 N -0.482 5.482 7 C 0.139 3.861 8 C -0.201 4.201 9 C -0.046 4.046 10 C -0.112 4.112 11 Cl -0.027 7.027 12 C 0.509 3.491 13 O -0.431 6.431 14 C -0.130 4.130 15 H 0.128 0.872 16 C 0.054 3.946 17 C -0.517 4.517 18 H 0.064 0.936 19 C 0.061 3.939 20 N -0.897 5.897 21 Si 0.897 3.103 22 H -0.280 1.280 23 H -0.287 1.287 24 H -0.272 1.272 25 H 0.077 0.923 26 H 0.089 0.911 27 H 0.097 0.903 28 H 0.167 0.833 29 H 0.144 0.856 30 H 0.146 0.854 31 H 0.020 0.980 32 H 0.042 0.958 33 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.503 16.447 -7.458 18.066 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.074 4.074 3 N -0.046 5.046 4 N -0.234 5.234 5 C 0.177 3.823 6 N -0.196 5.196 7 C -0.019 4.019 8 C -0.222 4.222 9 C -0.073 4.073 10 C -0.145 4.145 11 Cl 0.002 6.998 12 C 0.296 3.704 13 O -0.295 6.295 14 C -0.154 4.154 15 H 0.145 0.855 16 C 0.016 3.984 17 C -0.556 4.556 18 H 0.082 0.918 19 C -0.141 4.141 20 N -0.536 5.536 21 Si 0.724 3.276 22 H -0.206 1.206 23 H -0.213 1.213 24 H -0.197 1.197 25 H 0.096 0.904 26 H 0.108 0.892 27 H 0.115 0.885 28 H 0.184 0.816 29 H 0.161 0.839 30 H 0.164 0.836 31 H 0.038 0.962 32 H 0.060 0.940 33 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges 1.256 16.112 -7.300 17.734 hybrid contribution 0.484 -0.668 0.142 0.837 sum 1.740 15.445 -7.158 17.112 Atomic orbital electron populations 1.20375 0.84620 1.03848 1.04576 1.25843 0.97750 0.92022 0.91827 1.75373 0.86356 1.25100 1.17762 1.47359 1.02601 1.05762 1.67688 1.17836 0.86322 0.84793 0.93354 1.67387 0.97240 1.39105 1.15913 1.22691 0.97518 0.89120 0.92596 1.22022 0.96956 0.97116 1.06155 1.21371 0.91091 0.99735 0.95078 1.21401 0.88831 0.92516 1.11729 1.98375 1.15322 1.89397 1.96717 1.21682 0.92417 0.80992 0.75351 1.90750 1.30986 1.64782 1.42933 1.22131 0.89931 0.96248 1.07053 0.85457 1.18939 0.98815 0.93275 0.87339 1.21146 1.26515 1.02781 1.05117 0.91768 1.24946 0.95406 0.98576 0.95144 1.69949 1.39356 1.36247 1.08027 0.86505 0.80269 0.82505 0.78272 1.20611 1.21253 1.19698 0.90396 0.89239 0.88493 0.81613 0.83869 0.83620 0.96152 0.94023 0.92871 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.88 10.47 36.00 0.38 -0.50 16 2 C 0.12 1.96 6.93 -78.72 -0.55 1.41 16 3 N -0.24 -4.27 8.58 35.53 0.30 -3.96 16 4 N -0.42 -8.61 3.71 -11.01 -0.04 -8.65 16 5 C 0.41 7.63 7.51 -154.50 -1.16 6.47 16 6 N -0.48 -8.98 8.91 -12.30 -0.11 -9.09 16 7 C 0.14 1.85 11.17 -17.56 -0.20 1.65 16 8 C -0.20 -2.09 10.11 -39.42 -0.40 -2.49 16 9 C -0.05 -0.53 9.97 -39.28 -0.39 -0.92 16 10 C -0.11 -1.70 6.36 -39.17 -0.25 -1.95 16 11 Cl -0.03 -0.38 25.77 -51.86 -1.34 -1.72 16 12 C 0.51 11.67 7.53 -10.43 -0.08 11.59 16 13 O -0.43 -11.26 16.01 5.55 0.09 -11.18 16 14 C -0.13 -2.66 2.95 -92.08 -0.27 -2.93 16 15 H 0.13 2.43 8.14 -51.93 -0.42 2.01 16 16 C 0.05 1.34 4.49 -27.89 -0.13 1.22 16 17 C -0.52 -14.55 8.46 -34.44 -0.29 -14.84 16 18 H 0.06 1.84 7.44 -52.48 -0.39 1.45 16 19 C 0.06 1.74 5.46 -17.82 -0.10 1.64 16 20 N -0.90 -26.44 13.29 55.43 0.74 -25.71 16 21 Si 0.90 22.25 29.54 -169.99 -5.02 17.23 16 22 H -0.28 -7.04 7.11 56.52 0.40 -6.63 16 23 H -0.29 -6.92 7.11 56.52 0.40 -6.51 16 24 H -0.27 -6.63 7.11 56.52 0.40 -6.23 16 25 H 0.08 0.77 8.14 -51.93 -0.42 0.35 16 26 H 0.09 0.84 8.14 -51.93 -0.42 0.42 16 27 H 0.10 1.13 8.04 -51.92 -0.42 0.71 16 28 H 0.17 1.67 8.06 -52.48 -0.42 1.25 16 29 H 0.14 0.94 8.06 -52.49 -0.42 0.52 16 30 H 0.15 1.20 8.06 -52.48 -0.42 0.78 16 31 H 0.02 0.56 8.12 -51.93 -0.42 0.14 16 32 H 0.04 1.00 8.02 -51.93 -0.42 0.59 16 33 H 0.26 7.32 8.31 -40.82 -0.34 6.98 16 LS Contribution 307.06 15.07 4.63 4.63 Total: -1.00 -34.79 307.06 -7.50 -42.29 By element: Atomic # 1 Polarization: -0.87 SS G_CDS: -3.32 Total: -4.19 kcal Atomic # 6 Polarization: 3.77 SS G_CDS: -3.43 Total: 0.35 kcal Atomic # 7 Polarization: -48.29 SS G_CDS: 0.89 Total: -47.40 kcal Atomic # 8 Polarization: -11.26 SS G_CDS: 0.09 Total: -11.18 kcal Atomic # 14 Polarization: 22.25 SS G_CDS: -5.02 Total: 17.23 kcal Atomic # 17 Polarization: -0.38 SS G_CDS: -1.34 Total: -1.72 kcal Total LS contribution 4.63 Total: 4.63 kcal Total: -34.79 -7.50 -42.29 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000601933049.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 108.134 kcal (2) G-P(sol) polarization free energy of solvation -34.792 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 73.341 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.496 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.289 kcal (6) G-S(sol) free energy of system = (1) + (5) 65.845 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds