Wall clock time and date at job start Tue Mar 31 2020 07:02:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13598 * 1 3 3 N 1.35495 * 179.97438 * 2 1 4 4 C 1.46498 * 120.00322 * 290.21411 * 3 2 1 5 5 C 1.50703 * 109.46937 * 270.00086 * 4 3 2 6 6 O 1.21281 * 119.99887 * 0.02562 * 5 4 3 7 7 N 1.34772 * 119.99690 * 179.97438 * 5 4 3 8 8 C 1.46505 * 119.99707 * 179.97438 * 7 5 4 9 9 C 1.50709 * 109.47075 * 180.02562 * 8 7 5 10 10 H 1.08006 * 119.99780 * 0.02562 * 9 8 7 11 11 C 1.37878 * 119.99913 * 180.02562 * 9 8 7 12 12 N 1.31515 * 119.99968 * 0.02562 * 11 9 8 13 13 Si 1.86793 * 119.99877 * 180.02562 * 11 9 8 14 14 H 1.48497 * 109.47339 * 89.99825 * 13 11 9 15 15 H 1.48498 * 109.47133 * 210.00402 * 13 11 9 16 16 H 1.48504 * 109.47246 * 329.99879 * 13 11 9 17 17 C 1.39851 * 120.00083 * 110.21086 * 3 2 1 18 18 C 1.38918 * 120.07024 * 180.02562 * 17 3 2 19 19 C 1.38091 * 119.95808 * 179.97438 * 18 17 3 20 20 C 1.38288 * 120.08299 * 359.97438 * 19 18 17 21 21 C 1.38382 * 120.12996 * 0.04124 * 20 19 18 22 22 Cl 1.73606 * 119.97619 * 179.97438 * 21 20 19 23 23 C 1.38245 * 120.05217 * 359.96025 * 21 20 19 24 24 H 1.08999 * 109.47227 * 29.99844 * 4 3 2 25 25 H 1.09002 * 109.47360 * 149.99965 * 4 3 2 26 26 H 0.97000 * 120.00291 * 0.02562 * 7 5 4 27 27 H 1.08996 * 109.47439 * 300.00109 * 8 7 5 28 28 H 1.09002 * 109.46955 * 60.00408 * 8 7 5 29 29 H 0.97000 * 119.99570 * 179.97438 * 12 11 9 30 30 H 1.08006 * 120.01719 * 359.95877 * 18 17 3 31 31 H 1.07997 * 119.95744 * 179.97438 * 19 18 17 32 32 H 1.08000 * 119.93321 * 180.02562 * 20 19 18 33 33 H 1.07995 * 120.04656 * 180.29877 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 7 2.4909 0.0006 0.0000 4 6 3.2237 -0.4374 1.1905 5 6 3.4743 0.7457 2.0897 6 8 3.0793 1.8463 1.7679 7 7 4.1365 0.5805 3.2518 8 6 4.3807 1.7308 4.1257 9 6 5.1344 1.2802 5.3505 10 1 5.4048 0.2410 5.4661 11 6 5.4786 2.1946 6.3233 12 7 5.1488 3.4599 6.1826 13 14 6.4134 1.6362 7.8410 14 1 7.8732 1.7311 7.5861 15 1 6.0542 2.5045 8.9909 16 1 6.0558 0.2290 8.1528 17 6 3.1900 0.4193 -1.1366 18 6 4.5792 0.4200 -1.1383 19 6 5.2671 0.8335 -2.2620 20 6 4.5749 1.2463 -3.3858 21 6 3.1911 1.2473 -3.3878 22 17 2.3261 1.7670 -4.8005 23 6 2.4969 0.8346 -2.2658 24 1 2.6350 -1.1823 1.7259 25 1 4.1763 -0.8742 0.8907 26 1 4.4521 -0.2998 3.5093 27 1 4.9700 2.4752 3.5903 28 1 3.4282 2.1681 4.4252 29 1 5.3906 4.1031 6.8673 30 1 5.1208 0.0977 -0.2612 31 1 6.3471 0.8344 -2.2633 32 1 5.1154 1.5687 -4.2634 33 1 1.4169 0.8308 -2.2691 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000794572918.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:02:38 Heat of formation + Delta-G solvation = 26.883984 kcal Electronic energy + Delta-G solvation = -19807.369144 eV Core-core repulsion = 16473.570114 eV Total energy + Delta-G solvation = -3333.799030 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 293.067 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -40.52424 -38.89160 -37.43190 -36.54904 -35.05908 -34.31208 -32.48731 -31.31561 -30.32713 -28.55578 -26.63801 -23.59153 -22.98174 -22.19236 -20.16205 -19.44098 -17.87767 -17.45743 -16.25191 -15.98572 -15.48962 -15.28795 -15.00856 -14.73640 -14.57611 -14.04810 -14.01050 -13.59373 -13.51026 -12.92824 -12.60680 -12.52758 -12.07919 -12.07176 -11.91925 -11.74660 -11.52727 -11.14832 -11.06491 -10.95327 -10.54187 -10.39198 -9.50287 -9.36616 -9.05808 -8.84122 -8.06980 -8.03351 -6.24553 -4.32571 0.92592 1.04052 1.75581 2.05175 2.54232 2.96326 3.02830 3.18900 3.25428 3.27479 3.46856 3.88842 4.28171 4.37646 4.61237 4.78230 4.85947 4.95482 5.06194 5.11866 5.13933 5.23190 5.34025 5.63014 5.95573 6.09069 6.17328 6.22315 6.72694 7.16307 7.22215 7.39377 7.53672 7.84142 7.86640 8.40921 8.63502 8.87712 9.34219 10.85450 Molecular weight = 293.07amu Principal moments of inertia in cm(-1) A = 0.025357 B = 0.003140 C = 0.002976 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1103.978526 B = 8915.042403 C = 9405.382360 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.415 5.415 2 C 0.422 3.578 3 N -0.483 5.483 4 C 0.098 3.902 5 C 0.472 3.528 6 O -0.536 6.536 7 N -0.706 5.706 8 C 0.250 3.750 9 C -0.546 4.546 10 H 0.064 0.936 11 C 0.064 3.936 12 N -0.884 5.884 13 Si 0.905 3.095 14 H -0.278 1.278 15 H -0.284 1.284 16 H -0.272 1.272 17 C 0.214 3.786 18 C -0.155 4.155 19 C -0.063 4.063 20 C -0.147 4.147 21 C 0.007 3.993 22 Cl -0.068 7.068 23 C -0.163 4.163 24 H 0.117 0.883 25 H 0.126 0.874 26 H 0.392 0.608 27 H 0.029 0.971 28 H 0.027 0.973 29 H 0.267 0.733 30 H 0.138 0.862 31 H 0.140 0.860 32 H 0.135 0.865 33 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.185 -9.788 -17.646 20.214 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.106 5.106 2 C 0.018 3.982 3 N -0.193 5.193 4 C -0.028 4.028 5 C 0.254 3.746 6 O -0.413 6.413 7 N -0.355 5.355 8 C 0.130 3.870 9 C -0.584 4.584 10 H 0.082 0.918 11 C -0.140 4.140 12 N -0.521 5.521 13 Si 0.732 3.268 14 H -0.204 1.204 15 H -0.210 1.210 16 H -0.197 1.197 17 C 0.117 3.883 18 C -0.176 4.176 19 C -0.082 4.082 20 C -0.167 4.167 21 C -0.020 4.020 22 Cl -0.039 7.039 23 C -0.185 4.185 24 H 0.135 0.865 25 H 0.143 0.857 26 H 0.225 0.775 27 H 0.047 0.953 28 H 0.045 0.955 29 H 0.077 0.923 30 H 0.155 0.845 31 H 0.158 0.842 32 H 0.153 0.847 33 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -0.838 -8.783 -17.761 19.831 hybrid contribution 1.042 -0.412 1.079 1.555 sum 0.204 -9.195 -16.682 19.049 Atomic orbital electron populations 1.81914 1.05371 1.17180 1.06164 1.23276 0.85870 0.92769 0.96322 1.41175 0.97046 1.67819 1.13213 1.21840 0.99415 0.96819 0.84728 1.20800 0.80312 0.90345 0.83172 1.90743 1.51079 1.25998 1.73515 1.46455 1.55202 1.13967 1.19894 1.19156 0.96921 0.83226 0.87699 1.21192 1.37832 0.95214 1.04204 0.91781 1.24957 0.95750 0.94716 0.98560 1.69972 1.45327 1.01880 1.34922 0.86402 0.79926 0.78635 0.81880 1.20400 1.20988 1.19713 1.17468 0.91091 0.95034 0.84687 1.20838 0.91042 1.05321 1.00440 1.20907 1.00282 0.95642 0.91331 1.20961 0.91654 1.03990 1.00089 1.20530 0.92311 1.00732 0.88472 1.98376 1.77105 1.89086 1.39366 1.20523 1.00395 1.05662 0.91934 0.86519 0.85671 0.77465 0.95311 0.95455 0.92339 0.84472 0.84190 0.84726 0.84929 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.42 -6.72 18.54 41.27 0.77 -5.96 16 2 C 0.42 6.26 14.12 -102.20 -1.44 4.81 16 3 N -0.48 -6.28 2.20 -75.90 -0.17 -6.45 16 4 C 0.10 1.09 5.60 -5.19 -0.03 1.06 16 5 C 0.47 8.14 7.90 -10.99 -0.09 8.05 16 6 O -0.54 -12.00 16.43 5.56 0.09 -11.91 16 7 N -0.71 -12.95 5.55 -61.46 -0.34 -13.29 16 8 C 0.25 6.21 5.43 -5.19 -0.03 6.18 16 9 C -0.55 -13.97 9.28 -34.44 -0.32 -14.29 16 10 H 0.06 1.51 7.60 -52.48 -0.40 1.11 16 11 C 0.06 1.71 5.46 -17.82 -0.10 1.62 16 12 N -0.88 -25.29 13.29 55.43 0.74 -24.56 16 13 Si 0.90 20.06 29.54 -169.99 -5.02 15.03 16 14 H -0.28 -6.08 7.11 56.52 0.40 -5.67 16 15 H -0.28 -6.34 7.11 56.52 0.40 -5.94 16 16 H -0.27 -5.85 7.11 56.52 0.40 -5.44 16 17 C 0.21 2.64 6.52 -83.72 -0.55 2.10 16 18 C -0.15 -1.61 9.21 -39.38 -0.36 -1.97 16 19 C -0.06 -0.56 10.04 -39.62 -0.40 -0.96 16 20 C -0.15 -1.38 9.83 -39.51 -0.39 -1.77 16 21 C 0.01 0.08 6.32 -39.53 -0.25 -0.17 16 22 Cl -0.07 -0.72 28.95 -51.86 -1.50 -2.22 16 23 C -0.16 -2.02 9.08 -39.35 -0.36 -2.37 16 24 H 0.12 1.00 8.03 -51.93 -0.42 0.59 16 25 H 0.13 0.91 6.20 -51.93 -0.32 0.58 16 26 H 0.39 5.77 8.32 -40.82 -0.34 5.43 16 27 H 0.03 0.79 8.14 -51.93 -0.42 0.37 16 28 H 0.03 0.77 8.14 -51.93 -0.42 0.35 16 29 H 0.27 7.18 8.31 -40.82 -0.34 6.84 16 30 H 0.14 1.22 6.14 -52.48 -0.32 0.89 16 31 H 0.14 0.87 8.06 -52.49 -0.42 0.45 16 32 H 0.13 0.99 8.06 -52.49 -0.42 0.57 16 33 H 0.13 1.71 7.01 -52.49 -0.37 1.34 16 LS Contribution 318.60 15.07 4.80 4.80 Total: -1.00 -32.86 318.60 -7.94 -40.80 By element: Atomic # 1 Polarization: 4.45 SS G_CDS: -2.99 Total: 1.46 kcal Atomic # 6 Polarization: 6.59 SS G_CDS: -4.31 Total: 2.29 kcal Atomic # 7 Polarization: -51.25 SS G_CDS: 0.99 Total: -50.25 kcal Atomic # 8 Polarization: -12.00 SS G_CDS: 0.09 Total: -11.91 kcal Atomic # 14 Polarization: 20.06 SS G_CDS: -5.02 Total: 15.03 kcal Atomic # 17 Polarization: -0.72 SS G_CDS: -1.50 Total: -2.22 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -32.86 -7.94 -40.80 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000794572918.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.679 kcal (2) G-P(sol) polarization free energy of solvation -32.860 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.819 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.935 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.795 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.884 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds