Wall clock time and date at job start Tue Mar 31 2020 07:03:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 N 1.46501 * 109.46935 * 251.10045 * 3 2 1 5 5 C 1.37102 * 119.99802 * 263.95531 * 4 3 2 6 6 H 1.08002 * 119.99899 * 200.21406 * 5 4 3 7 7 C 1.38947 * 120.00107 * 20.21478 * 5 4 3 8 8 N 1.31409 * 120.00143 * 21.43652 * 7 5 4 9 9 Si 1.86806 * 119.99982 * 201.43477 * 7 5 4 10 10 H 1.48499 * 109.46942 * 0.02562 * 9 7 5 11 11 H 1.48497 * 109.47178 * 120.00162 * 9 7 5 12 12 H 1.48500 * 109.47012 * 240.00040 * 9 7 5 13 13 C 1.34769 * 120.00022 * 83.95622 * 4 3 2 14 14 O 1.21292 * 120.00253 * 179.97438 * 13 4 3 15 15 C 1.50700 * 119.99878 * 359.97438 * 13 4 3 16 16 C 1.53004 * 109.46875 * 180.02562 * 15 13 4 17 17 C 1.50700 * 109.46875 * 180.02562 * 16 15 13 18 18 C 1.38610 * 120.42495 * 99.97856 * 17 16 15 19 19 C 1.38673 * 118.43783 * 180.02562 * 18 17 16 20 20 C 1.38190 * 119.19018 * 0.02562 * 19 18 17 21 21 N 1.31875 * 120.78128 * 359.97438 * 20 19 18 22 22 C 1.31984 * 121.70927 * 359.97438 * 21 20 19 23 23 Cl 1.73596 * 119.63527 * 180.02562 * 22 21 20 24 24 H 1.09006 * 109.46743 * 131.10590 * 3 2 1 25 25 H 1.08997 * 109.47625 * 11.10461 * 3 2 1 26 26 H 0.97005 * 120.00322 * 179.97438 * 8 7 5 27 27 H 1.09000 * 109.47067 * 60.00058 * 15 13 4 28 28 H 1.08999 * 109.47155 * 299.99993 * 15 13 4 29 29 H 1.09000 * 109.47368 * 60.00069 * 16 15 13 30 30 H 1.08999 * 109.47081 * 299.99864 * 16 15 13 31 31 H 1.08001 * 120.78296 * 0.03598 * 18 17 16 32 32 H 1.07994 * 120.40474 * 180.02562 * 19 18 17 33 33 H 1.08005 * 119.60885 * 180.26345 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0961 0.4483 1.3068 5 6 3.4418 1.7614 1.4963 6 1 4.0909 2.0361 2.3146 7 6 2.9572 2.7386 0.6357 8 7 1.8746 2.5113 -0.0736 9 14 3.8446 4.3757 0.4869 10 1 5.0279 4.3806 1.3841 11 1 4.2873 4.5730 -0.9167 12 1 2.9242 5.4747 0.8748 13 6 3.2052 -0.4307 2.3225 14 8 3.6097 -0.0602 3.4043 15 6 2.8246 -1.8739 2.1143 16 6 3.0404 -2.6509 3.4145 17 6 2.6604 -4.0943 3.2061 18 6 3.6367 -5.0512 2.9772 19 6 3.2408 -6.3670 2.7903 20 6 1.8955 -6.6792 2.8374 21 7 0.9928 -5.7433 3.0574 22 6 1.3325 -4.4811 3.2406 23 17 0.0995 -3.2932 3.5269 24 1 2.9710 0.6765 -0.7744 25 1 2.9718 -1.0075 -0.1979 26 1 1.5360 3.1937 -0.6742 27 1 3.4443 -2.3031 1.3269 28 1 1.7755 -1.9349 1.8249 29 1 2.4205 -2.2216 4.2016 30 1 4.0894 -2.5900 3.7044 31 1 4.6813 -4.7785 2.9454 32 1 3.9749 -7.1383 2.6102 33 1 1.5799 -7.7025 2.6970 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000824991358.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:03:26 Heat of formation + Delta-G solvation = 25.379995 kcal Electronic energy + Delta-G solvation = -20501.186726 eV Core-core repulsion = 17167.322478 eV Total energy + Delta-G solvation = -3333.864248 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 293.067 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -40.42646 -38.86994 -36.57242 -35.87311 -34.63923 -34.10712 -32.13055 -31.82215 -29.81049 -27.44418 -25.75315 -23.99517 -23.72383 -21.67701 -19.05114 -17.90030 -17.48465 -16.92798 -16.58915 -16.28537 -15.22065 -14.82743 -14.51712 -14.43706 -14.15303 -13.83645 -13.30772 -12.99532 -12.86001 -12.69428 -12.12356 -11.80894 -11.77350 -11.69684 -11.59338 -11.28318 -11.15673 -11.03434 -10.74116 -10.54225 -10.38716 -10.30616 -9.91769 -9.69133 -9.27090 -8.95368 -8.57541 -8.03329 -6.50687 -4.01674 0.79056 1.02538 1.88769 3.08075 3.21879 3.27753 3.48458 3.56253 3.80813 3.99948 4.11648 4.30340 4.58942 4.64327 4.77838 4.86614 4.92489 5.06979 5.19989 5.29772 5.41871 5.47616 5.74745 5.75636 5.87652 5.96434 6.13903 6.29778 6.36159 6.44544 6.46456 7.46813 7.58803 7.90652 8.27133 8.76753 8.99498 9.18942 9.72992 10.55611 Molecular weight = 293.07amu Principal moments of inertia in cm(-1) A = 0.025182 B = 0.004339 C = 0.004071 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1111.648178 B = 6451.303667 C = 6876.655895 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.468 5.468 2 C 0.243 3.757 3 C 0.222 3.778 4 N -0.443 5.443 5 C -0.315 4.315 6 H 0.108 0.892 7 C 0.032 3.968 8 N -0.875 5.875 9 Si 0.925 3.075 10 H -0.267 1.267 11 H -0.279 1.279 12 H -0.283 1.283 13 C 0.459 3.541 14 O -0.572 6.572 15 C -0.132 4.132 16 C -0.062 4.062 17 C -0.107 4.107 18 C -0.062 4.062 19 C -0.170 4.170 20 C 0.105 3.895 21 N -0.479 5.479 22 C 0.172 3.828 23 Cl -0.020 7.020 24 H 0.124 0.876 25 H 0.083 0.917 26 H 0.272 0.728 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.089 0.911 30 H 0.087 0.913 31 H 0.146 0.854 32 H 0.141 0.859 33 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.186 -15.687 0.807 16.542 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.148 5.148 2 C -0.076 4.076 3 C 0.095 3.905 4 N -0.164 5.164 5 C -0.442 4.442 6 H 0.126 0.874 7 C -0.172 4.172 8 N -0.514 5.514 9 Si 0.752 3.248 10 H -0.191 1.191 11 H -0.205 1.205 12 H -0.209 1.209 13 C 0.248 3.752 14 O -0.455 6.455 15 C -0.172 4.172 16 C -0.101 4.101 17 C -0.110 4.110 18 C -0.088 4.088 19 C -0.190 4.190 20 C -0.052 4.052 21 N -0.189 5.189 22 C 0.008 3.992 23 Cl 0.009 6.991 24 H 0.141 0.859 25 H 0.101 0.899 26 H 0.083 0.917 27 H 0.100 0.900 28 H 0.100 0.900 29 H 0.107 0.893 30 H 0.105 0.895 31 H 0.164 0.836 32 H 0.159 0.841 33 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges 2.609 -15.487 1.263 15.756 hybrid contribution 1.258 1.224 -0.358 1.791 sum 3.867 -14.263 0.905 14.805 Atomic orbital electron populations 1.80896 1.13565 1.12150 1.08202 1.29256 0.95356 0.90137 0.92824 1.18678 0.81753 1.00083 0.90035 1.43631 1.56675 1.08912 1.07156 1.19728 1.27984 0.80913 1.15548 0.87427 1.25294 0.94813 0.99748 0.97296 1.69859 1.18052 1.36102 1.27346 0.85882 0.79615 0.81151 0.78194 1.19093 1.20490 1.20904 1.20044 0.83660 0.87174 0.84348 1.90543 1.50262 1.79982 1.24711 1.21607 1.03005 0.94594 0.98043 1.20344 1.03754 0.87430 0.98541 1.20811 0.91752 0.98569 0.99871 1.21586 1.00064 0.92028 0.95156 1.22216 0.97668 0.97400 1.01682 1.22636 0.88872 0.98079 0.95653 1.67035 1.39409 1.00203 1.12267 1.21691 0.88390 0.89613 0.99506 1.98447 1.54399 1.52600 1.93682 0.85863 0.89883 0.91692 0.89950 0.89980 0.89263 0.89454 0.83622 0.84130 0.82089 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -11.24 18.54 42.15 0.78 -10.45 16 2 C 0.24 5.37 12.82 -20.76 -0.27 5.10 16 3 C 0.22 4.33 4.91 -6.83 -0.03 4.30 16 4 N -0.44 -10.12 2.60 -117.93 -0.31 -10.43 16 5 C -0.31 -7.98 9.27 -14.93 -0.14 -8.12 16 6 H 0.11 2.88 7.43 -52.49 -0.39 2.49 16 7 C 0.03 0.79 4.84 -17.47 -0.08 0.71 16 8 N -0.88 -22.09 9.58 55.50 0.53 -21.56 16 9 Si 0.93 19.43 29.60 -169.99 -5.03 14.40 16 10 H -0.27 -5.59 7.11 56.52 0.40 -5.19 16 11 H -0.28 -5.70 7.11 56.52 0.40 -5.30 16 12 H -0.28 -6.13 7.11 56.52 0.40 -5.73 16 13 C 0.46 10.03 7.56 -10.99 -0.08 9.94 16 14 O -0.57 -14.37 15.65 5.55 0.09 -14.28 16 15 C -0.13 -2.20 4.24 -27.88 -0.12 -2.32 16 16 C -0.06 -0.94 4.10 -27.88 -0.11 -1.05 16 17 C -0.11 -1.40 5.16 -104.44 -0.54 -1.94 16 18 C -0.06 -0.62 9.82 -39.28 -0.39 -1.01 16 19 C -0.17 -1.44 10.11 -39.44 -0.40 -1.84 16 20 C 0.10 1.05 11.18 -17.55 -0.20 0.85 16 21 N -0.48 -6.57 10.34 -10.36 -0.11 -6.67 16 22 C 0.17 2.50 7.27 -17.44 -0.13 2.38 16 23 Cl -0.02 -0.32 26.81 -51.86 -1.39 -1.71 16 24 H 0.12 2.44 6.63 -51.93 -0.34 2.10 16 25 H 0.08 1.22 6.69 -51.93 -0.35 0.88 16 26 H 0.27 6.67 8.31 -40.82 -0.34 6.33 16 27 H 0.08 1.12 7.42 -51.93 -0.39 0.74 16 28 H 0.08 1.44 6.62 -51.93 -0.34 1.10 16 29 H 0.09 1.50 7.33 -51.93 -0.38 1.12 16 30 H 0.09 1.23 7.99 -51.93 -0.41 0.82 16 31 H 0.15 1.10 8.06 -52.49 -0.42 0.68 16 32 H 0.14 0.72 8.06 -52.49 -0.42 0.30 16 33 H 0.16 1.08 8.06 -52.48 -0.42 0.66 16 LS Contribution 308.32 15.07 4.65 4.65 Total: -1.00 -31.78 308.32 -6.28 -38.06 By element: Atomic # 1 Polarization: 4.00 SS G_CDS: -3.01 Total: 0.99 kcal Atomic # 6 Polarization: 9.50 SS G_CDS: -2.48 Total: 7.02 kcal Atomic # 7 Polarization: -50.02 SS G_CDS: 0.90 Total: -49.12 kcal Atomic # 8 Polarization: -14.37 SS G_CDS: 0.09 Total: -14.28 kcal Atomic # 14 Polarization: 19.43 SS G_CDS: -5.03 Total: 14.40 kcal Atomic # 17 Polarization: -0.32 SS G_CDS: -1.39 Total: -1.71 kcal Total LS contribution 4.65 Total: 4.65 kcal Total: -31.78 -6.28 -38.06 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000824991358.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.439 kcal (2) G-P(sol) polarization free energy of solvation -31.776 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.663 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.283 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.059 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.380 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds