Wall clock time and date at job start Tue Mar 31 2020 07:13:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.27572 * 126.41818 * 2 1 4 4 N 1.39145 * 113.16548 * 180.02562 * 3 2 1 5 5 C 1.39525 * 124.44216 * 179.97438 * 4 3 2 6 6 C 1.39003 * 119.68173 * 0.02795 * 5 4 3 7 7 C 1.38410 * 119.12816 * 179.74363 * 6 5 4 8 8 C 1.38766 * 118.51085 * 0.25521 * 7 6 5 9 9 C 1.38268 * 119.29945 * 359.97438 * 8 7 6 10 10 Cl 1.73600 * 119.59631 * 179.97438 * 9 8 7 11 11 N 1.32006 * 120.81485 * 359.97438 * 9 8 7 12 12 C 1.34957 * 111.12386 * 0.26591 * 4 3 2 13 13 O 1.21284 * 127.50083 * 179.73080 * 12 4 3 14 14 C 1.51442 * 126.41734 * 180.02562 * 2 1 3 15 15 H 1.09005 * 110.60795 * 298.65296 * 14 2 1 16 16 C 1.53002 * 110.60584 * 61.46238 * 14 2 1 17 17 C 1.50703 * 109.47007 * 185.00081 * 16 14 2 18 18 H 1.07999 * 120.00128 * 359.97438 * 17 16 14 19 19 C 1.37873 * 119.99530 * 180.02562 * 17 16 14 20 20 N 1.31515 * 120.00708 * 0.02562 * 19 17 16 21 21 Si 1.86808 * 119.99742 * 179.97438 * 19 17 16 22 22 H 1.48496 * 109.46890 * 359.97438 * 21 19 17 23 23 H 1.48504 * 109.47091 * 120.00011 * 21 19 17 24 24 H 1.48500 * 109.47083 * 239.99859 * 21 19 17 25 25 H 1.08997 * 109.47034 * 359.97232 * 1 2 3 26 26 H 1.08997 * 109.47292 * 119.97461 * 1 2 3 27 27 H 1.09000 * 109.47273 * 239.97692 * 1 2 3 28 28 H 1.08002 * 120.43906 * 0.02562 * 6 5 4 29 29 H 1.08003 * 120.74537 * 180.22994 * 7 6 5 30 30 H 1.08003 * 120.35153 * 180.02562 * 8 7 6 31 31 H 1.09001 * 109.47442 * 304.99932 * 16 14 2 32 32 H 1.09000 * 109.47019 * 64.99931 * 16 14 2 33 33 H 0.97001 * 120.00283 * 180.02562 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2644 1.0266 0.0000 4 7 3.6188 0.7076 -0.0006 5 6 4.6507 1.6467 -0.0012 6 6 4.3469 3.0031 -0.0007 7 6 5.3795 3.9248 0.0041 8 6 6.6856 3.4562 0.0028 9 6 6.9153 2.0927 -0.0027 10 17 8.5463 1.4980 -0.0050 11 7 5.9097 1.2376 -0.0061 12 6 3.8036 -0.6292 -0.0068 13 8 4.8578 -1.2288 -0.0135 14 6 2.4061 -1.2187 -0.0005 15 1 2.2402 -1.8183 0.8945 16 6 2.1752 -2.0576 -1.2591 17 6 2.9899 -3.3227 -1.1759 18 1 3.6106 -3.5095 -0.3120 19 6 2.9435 -4.2411 -2.2031 20 7 2.1889 -4.0131 -3.2558 21 14 3.9539 -5.8090 -2.1004 22 1 4.7136 -5.8256 -0.8246 23 1 3.0491 -6.9854 -2.1538 24 1 4.9027 -5.8622 -3.2416 25 1 -0.3633 1.0276 0.0005 26 1 -0.3634 -0.5134 -0.8902 27 1 -0.3634 -0.5142 0.8898 28 1 3.3187 3.3336 0.0006 29 1 5.1733 4.9850 0.0083 30 1 7.5140 4.1491 0.0068 31 1 1.1179 -2.3108 -1.3381 32 1 2.4787 -1.4870 -2.1368 33 1 2.1561 -4.6594 -3.9783 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000871950740.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:13:09 Heat of formation + Delta-G solvation = 57.338382 kcal Electronic energy + Delta-G solvation = -20609.898829 eV Core-core repulsion = 17277.420401 eV Total energy + Delta-G solvation = -3332.478428 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 293.067 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -41.37654 -39.85241 -36.98646 -36.65804 -34.47151 -33.04249 -32.52157 -30.53683 -30.46729 -27.95845 -26.21544 -23.98496 -23.41021 -22.19178 -20.17068 -19.65537 -17.93143 -16.71083 -16.49907 -15.96777 -15.82793 -15.23883 -14.70591 -14.55976 -14.44658 -13.88825 -13.43215 -13.37874 -13.25987 -12.45720 -12.42815 -12.22738 -12.09368 -11.63773 -11.49915 -11.38613 -11.28372 -10.97032 -10.69119 -10.37476 -10.14218 -9.87144 -9.70940 -9.43161 -9.32147 -8.87077 -8.41746 -8.00329 -6.07699 -4.09438 0.84259 1.09456 1.67574 1.94298 2.38090 3.00116 3.32439 3.40511 3.48263 3.79855 4.12348 4.38726 4.50380 4.56273 4.81485 4.88501 4.97357 5.24324 5.28564 5.31765 5.61002 5.64479 5.70590 5.84560 5.93825 5.99642 6.10170 6.28023 6.45666 6.77092 7.30676 7.36187 7.47965 7.90536 8.02791 8.20869 8.37844 8.95533 9.55920 11.03525 Molecular weight = 293.07amu Principal moments of inertia in cm(-1) A = 0.014768 B = 0.005269 C = 0.004054 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1895.503155 B = 5312.329288 C = 6904.319469 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 C 0.129 3.871 3 N -0.258 5.258 4 N -0.424 5.424 5 C 0.416 3.584 6 C -0.184 4.184 7 C -0.040 4.040 8 C -0.192 4.192 9 C 0.213 3.787 10 Cl -0.030 7.030 11 N -0.492 5.492 12 C 0.507 3.493 13 O -0.426 6.426 14 C -0.132 4.132 15 H 0.130 0.870 16 C 0.053 3.947 17 C -0.517 4.517 18 H 0.065 0.935 19 C 0.061 3.939 20 N -0.897 5.897 21 Si 0.895 3.105 22 H -0.270 1.270 23 H -0.283 1.283 24 H -0.284 1.284 25 H 0.079 0.921 26 H 0.098 0.902 27 H 0.091 0.909 28 H 0.152 0.848 29 H 0.149 0.851 30 H 0.145 0.855 31 H 0.042 0.958 32 H 0.020 0.980 33 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.336 16.532 7.499 18.156 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C -0.063 4.063 3 N -0.065 5.065 4 N -0.237 5.237 5 C 0.187 3.813 6 C -0.207 4.207 7 C -0.066 4.066 8 C -0.215 4.215 9 C 0.047 3.953 10 Cl -0.002 7.002 11 N -0.209 5.209 12 C 0.293 3.707 13 O -0.289 6.289 14 C -0.156 4.156 15 H 0.147 0.853 16 C 0.015 3.985 17 C -0.555 4.555 18 H 0.083 0.917 19 C -0.140 4.140 20 N -0.536 5.536 21 Si 0.723 3.277 22 H -0.195 1.195 23 H -0.210 1.210 24 H -0.210 1.210 25 H 0.098 0.902 26 H 0.117 0.883 27 H 0.109 0.891 28 H 0.170 0.830 29 H 0.167 0.833 30 H 0.163 0.837 31 H 0.060 0.940 32 H 0.039 0.961 33 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges 1.413 16.100 7.332 17.747 hybrid contribution 0.729 -0.931 -0.157 1.193 sum 2.143 15.169 7.175 16.916 Atomic orbital electron populations 1.20416 0.84382 1.04019 1.04775 1.25737 0.97637 0.91828 0.91114 1.74632 0.86688 1.26575 1.18614 1.47252 1.02348 1.05888 1.68183 1.17590 0.84338 0.86554 0.92855 1.21683 1.02024 0.91058 1.05936 1.21394 0.91022 1.00323 0.93889 1.21685 0.98688 0.93917 1.07200 1.21221 0.87438 0.88696 0.97946 1.98407 1.15420 1.89962 1.96362 1.66259 0.97878 1.39729 1.16990 1.21652 0.92419 0.81047 0.75565 1.90779 1.30907 1.64644 1.42552 1.22169 0.89940 0.96246 1.07200 0.85258 1.18964 0.98869 0.93367 0.87274 1.21176 1.26446 1.02729 1.05174 0.91686 1.24943 0.95397 0.98608 0.95099 1.69951 1.39446 1.36152 1.08030 0.86461 0.80075 0.82734 0.78416 1.19466 1.20957 1.20974 0.90220 0.88328 0.89068 0.83008 0.83338 0.83672 0.94000 0.96142 0.92897 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.82 10.47 36.01 0.38 -0.44 16 2 C 0.13 2.03 6.93 -78.72 -0.55 1.48 16 3 N -0.26 -4.34 11.15 35.53 0.40 -3.94 16 4 N -0.42 -8.40 3.71 -11.04 -0.04 -8.44 16 5 C 0.42 7.61 7.50 -154.57 -1.16 6.45 16 6 C -0.18 -2.50 9.65 -39.23 -0.38 -2.88 16 7 C -0.04 -0.42 10.16 -39.32 -0.40 -0.82 16 8 C -0.19 -2.23 9.87 -39.37 -0.39 -2.61 16 9 C 0.21 3.34 7.27 -17.47 -0.13 3.21 16 10 Cl -0.03 -0.43 29.10 -51.86 -1.51 -1.94 16 11 N -0.49 -9.62 8.88 -9.45 -0.08 -9.70 16 12 C 0.51 11.54 7.51 -10.42 -0.08 11.47 16 13 O -0.43 -11.27 15.98 5.55 0.09 -11.18 16 14 C -0.13 -2.64 2.98 -92.08 -0.27 -2.92 16 15 H 0.13 2.41 8.14 -51.93 -0.42 1.98 16 16 C 0.05 1.30 4.48 -27.88 -0.12 1.18 16 17 C -0.52 -14.49 8.43 -34.44 -0.29 -14.78 16 18 H 0.06 1.86 7.43 -52.49 -0.39 1.47 16 19 C 0.06 1.74 5.46 -17.82 -0.10 1.64 16 20 N -0.90 -26.35 13.29 55.43 0.74 -25.61 16 21 Si 0.90 22.30 29.54 -169.99 -5.02 17.28 16 22 H -0.27 -6.75 7.11 56.52 0.40 -6.34 16 23 H -0.28 -6.81 7.11 56.52 0.40 -6.41 16 24 H -0.28 -7.10 7.11 56.52 0.40 -6.70 16 25 H 0.08 0.68 8.14 -51.93 -0.42 0.26 16 26 H 0.10 1.06 8.04 -51.93 -0.42 0.64 16 27 H 0.09 0.77 8.14 -51.93 -0.42 0.35 16 28 H 0.15 1.82 7.59 -52.49 -0.40 1.43 16 29 H 0.15 0.94 8.06 -52.48 -0.42 0.52 16 30 H 0.15 1.20 8.06 -52.48 -0.42 0.78 16 31 H 0.04 0.99 8.01 -51.93 -0.42 0.57 16 32 H 0.02 0.55 8.12 -51.93 -0.42 0.13 16 33 H 0.26 7.28 8.31 -40.82 -0.34 6.94 16 LS Contribution 311.73 15.07 4.70 4.70 Total: -1.00 -34.73 311.73 -7.52 -42.25 By element: Atomic # 1 Polarization: -1.09 SS G_CDS: -3.29 Total: -4.38 kcal Atomic # 6 Polarization: 4.46 SS G_CDS: -3.49 Total: 0.97 kcal Atomic # 7 Polarization: -48.70 SS G_CDS: 1.01 Total: -47.69 kcal Atomic # 8 Polarization: -11.27 SS G_CDS: 0.09 Total: -11.18 kcal Atomic # 14 Polarization: 22.30 SS G_CDS: -5.02 Total: 17.28 kcal Atomic # 17 Polarization: -0.43 SS G_CDS: -1.51 Total: -1.94 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -34.73 -7.52 -42.25 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000871950740.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 99.589 kcal (2) G-P(sol) polarization free energy of solvation -34.735 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 64.855 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.516 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.251 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.338 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds