Wall clock time and date at job start Tue Mar 31 2020 07:13:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 N 1.27567 * 126.41489 * 2 1 4 4 N 1.39150 * 113.16570 * 180.18544 * 3 2 1 5 5 C 1.39526 * 124.44363 * 179.77169 * 4 3 2 6 6 C 1.38994 * 119.68335 * 359.71919 * 5 4 3 7 7 C 1.38406 * 119.12982 * 179.97438 * 6 5 4 8 8 C 1.38775 * 118.51022 * 0.02847 * 7 6 5 9 9 C 1.38264 * 119.29660 * 359.97438 * 8 7 6 10 10 Cl 1.73603 * 119.58982 * 180.02562 * 9 8 7 11 11 N 1.32005 * 120.81455 * 359.97438 * 9 8 7 12 12 C 1.34957 * 111.12125 * 359.50528 * 4 3 2 13 13 O 1.21281 * 127.50544 * 180.28787 * 12 4 3 14 14 C 1.51436 * 126.41694 * 179.66353 * 2 1 3 15 15 H 1.09006 * 110.60845 * 61.48960 * 14 2 1 16 16 C 1.53000 * 110.61084 * 298.51847 * 14 2 1 17 17 C 1.50704 * 109.47329 * 179.42161 * 16 14 2 18 18 H 1.08000 * 119.99455 * 359.97438 * 17 16 14 19 19 C 1.37876 * 119.99790 * 179.97438 * 17 16 14 20 20 N 1.31515 * 120.00298 * 359.97438 * 19 17 16 21 21 Si 1.86800 * 119.99590 * 179.97438 * 19 17 16 22 22 H 1.48498 * 109.47374 * 90.00144 * 21 19 17 23 23 H 1.48508 * 109.47055 * 209.99891 * 21 19 17 24 24 H 1.48500 * 109.47480 * 329.99906 * 21 19 17 25 25 H 1.09003 * 109.46975 * 270.33072 * 1 2 3 26 26 H 1.08991 * 109.47182 * 30.34063 * 1 2 3 27 27 H 1.09010 * 109.46763 * 150.33763 * 1 2 3 28 28 H 1.08003 * 120.43749 * 0.02562 * 6 5 4 29 29 H 1.08003 * 120.74255 * 180.29007 * 7 6 5 30 30 H 1.08002 * 120.34815 * 179.97438 * 8 7 6 31 31 H 1.08995 * 109.46825 * 299.41804 * 16 14 2 32 32 H 1.08995 * 109.47178 * 59.42013 * 16 14 2 33 33 H 0.96996 * 119.99806 * 179.97438 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2643 1.0266 0.0000 4 7 3.6188 0.7077 -0.0041 5 6 4.6506 1.6468 -0.0096 6 6 4.3468 3.0031 -0.0171 7 6 5.3793 3.9248 -0.0219 8 6 6.6856 3.4562 -0.0197 9 6 6.9152 2.0928 -0.0122 10 17 8.5463 1.4983 -0.0087 11 7 5.9096 1.2377 -0.0067 12 6 3.8037 -0.6292 0.0037 13 8 4.8579 -1.2288 0.0076 14 6 2.4061 -1.2186 0.0072 15 1 2.2419 -1.8217 -0.8859 16 6 2.1756 -2.0505 1.2704 17 6 3.0714 -3.2622 1.2444 18 1 3.7380 -3.4229 0.4100 19 6 3.0398 -4.1653 2.2857 20 7 2.2283 -3.9692 3.3019 21 14 4.1496 -5.6675 2.2531 22 1 5.4440 -5.3408 2.9034 23 1 3.4955 -6.7822 2.9846 24 1 4.3915 -6.0738 0.8454 25 1 -0.3633 0.0059 1.0277 26 1 -0.3633 0.8868 -0.5191 27 1 -0.3633 -0.8931 -0.5086 28 1 3.3186 3.3335 -0.0183 29 1 5.1730 4.9850 -0.0231 30 1 7.5139 4.1492 -0.0237 31 1 2.4051 -1.4479 2.1491 32 1 1.1341 -2.3695 1.3104 33 1 2.2058 -4.6048 4.0342 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000871950746.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:13:11 Heat of formation + Delta-G solvation = 57.594942 kcal Electronic energy + Delta-G solvation = -20631.618967 eV Core-core repulsion = 17299.151664 eV Total energy + Delta-G solvation = -3332.467303 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 293.067 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -41.37075 -39.84784 -36.97915 -36.65292 -34.46348 -33.03173 -32.51677 -30.52850 -30.46375 -27.96000 -26.20526 -23.98068 -23.40857 -22.18202 -20.17049 -19.65161 -17.92570 -16.70593 -16.44149 -15.95946 -15.86327 -15.23397 -14.69196 -14.56459 -14.43729 -13.88334 -13.42154 -13.36836 -13.24827 -12.44754 -12.43964 -12.23215 -12.10111 -11.61448 -11.50802 -11.39846 -11.27883 -10.93925 -10.70466 -10.35622 -10.12865 -9.88207 -9.69726 -9.44730 -9.33506 -8.82553 -8.40669 -7.99613 -6.06870 -4.08537 0.84832 1.09986 1.68091 1.94550 2.38629 3.01096 3.35203 3.41276 3.46511 3.80519 4.12828 4.38955 4.50770 4.56553 4.81928 4.89037 4.97855 5.25324 5.29319 5.32484 5.63294 5.64303 5.68387 5.84343 5.93757 5.99703 6.10771 6.27848 6.45443 6.77686 7.31644 7.36368 7.48279 7.91934 8.03303 8.21749 8.38950 8.97103 9.56915 11.04338 Molecular weight = 293.07amu Principal moments of inertia in cm(-1) A = 0.014467 B = 0.005390 C = 0.004103 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1934.919633 B = 5193.393553 C = 6822.116832 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 C 0.129 3.871 3 N -0.258 5.258 4 N -0.424 5.424 5 C 0.416 3.584 6 C -0.184 4.184 7 C -0.040 4.040 8 C -0.192 4.192 9 C 0.213 3.787 10 Cl -0.030 7.030 11 N -0.492 5.492 12 C 0.507 3.493 13 O -0.426 6.426 14 C -0.131 4.131 15 H 0.129 0.871 16 C 0.054 3.946 17 C -0.519 4.519 18 H 0.066 0.934 19 C 0.061 3.939 20 N -0.897 5.897 21 Si 0.896 3.104 22 H -0.280 1.280 23 H -0.287 1.287 24 H -0.272 1.272 25 H 0.095 0.905 26 H 0.080 0.920 27 H 0.091 0.909 28 H 0.152 0.848 29 H 0.149 0.851 30 H 0.145 0.855 31 H 0.020 0.980 32 H 0.042 0.958 33 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.201 16.402 -7.651 18.100 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.064 4.064 3 N -0.065 5.065 4 N -0.237 5.237 5 C 0.187 3.813 6 C -0.207 4.207 7 C -0.066 4.066 8 C -0.215 4.215 9 C 0.047 3.953 10 Cl -0.002 7.002 11 N -0.208 5.208 12 C 0.294 3.706 13 O -0.288 6.288 14 C -0.155 4.155 15 H 0.146 0.854 16 C 0.016 3.984 17 C -0.557 4.557 18 H 0.085 0.915 19 C -0.140 4.140 20 N -0.536 5.536 21 Si 0.724 3.276 22 H -0.206 1.206 23 H -0.212 1.212 24 H -0.197 1.197 25 H 0.113 0.887 26 H 0.099 0.901 27 H 0.110 0.890 28 H 0.170 0.830 29 H 0.167 0.833 30 H 0.163 0.837 31 H 0.039 0.961 32 H 0.060 0.940 33 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges 1.270 15.964 -7.484 17.677 hybrid contribution 0.788 -0.886 0.197 1.202 sum 2.058 15.078 -7.287 16.872 Atomic orbital electron populations 1.20393 0.84373 1.04095 1.04563 1.25739 0.97626 0.91844 0.91153 1.74609 0.86718 1.26604 1.18588 1.47258 1.02322 1.05896 1.68189 1.17588 0.84343 0.86555 0.92835 1.21679 1.02020 0.91064 1.05956 1.21394 0.91024 1.00318 0.93895 1.21685 0.98684 0.93918 1.07219 1.21219 0.87438 0.88694 0.97942 1.98407 1.15423 1.89971 1.96362 1.66256 0.97876 1.39726 1.16983 1.21640 0.92421 0.81028 0.75552 1.90775 1.30928 1.64603 1.42498 1.22180 0.89990 0.96237 1.07107 0.85373 1.18943 0.98948 0.93415 0.87111 1.21172 1.22123 1.06056 1.06369 0.91550 1.24937 0.95515 0.98357 0.95205 1.69944 1.37664 1.36920 1.09093 0.86508 0.80742 0.82012 0.78318 1.20590 1.21245 1.19664 0.88703 0.90092 0.89011 0.83014 0.83346 0.83678 0.96142 0.93971 0.92866 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.80 10.49 36.01 0.38 -0.42 16 2 C 0.13 2.02 6.93 -78.73 -0.55 1.48 16 3 N -0.26 -4.34 11.15 35.53 0.40 -3.95 16 4 N -0.42 -8.41 3.71 -11.04 -0.04 -8.45 16 5 C 0.42 7.63 7.50 -154.58 -1.16 6.47 16 6 C -0.18 -2.51 9.65 -39.24 -0.38 -2.89 16 7 C -0.04 -0.43 10.17 -39.32 -0.40 -0.82 16 8 C -0.19 -2.24 9.87 -39.37 -0.39 -2.63 16 9 C 0.21 3.35 7.27 -17.47 -0.13 3.22 16 10 Cl -0.03 -0.44 29.10 -51.86 -1.51 -1.95 16 11 N -0.49 -9.64 8.88 -9.45 -0.08 -9.73 16 12 C 0.51 11.56 7.49 -10.42 -0.08 11.49 16 13 O -0.43 -11.25 15.57 5.56 0.09 -11.16 16 14 C -0.13 -2.63 3.01 -92.08 -0.28 -2.91 16 15 H 0.13 2.37 8.14 -51.93 -0.42 1.95 16 16 C 0.05 1.32 4.52 -27.88 -0.13 1.19 16 17 C -0.52 -14.60 8.36 -34.44 -0.29 -14.89 16 18 H 0.07 1.92 7.06 -52.49 -0.37 1.55 16 19 C 0.06 1.76 5.46 -17.82 -0.10 1.66 16 20 N -0.90 -26.40 13.29 55.43 0.74 -25.66 16 21 Si 0.90 22.45 29.54 -169.99 -5.02 17.43 16 22 H -0.28 -7.13 7.11 56.52 0.40 -6.72 16 23 H -0.29 -6.96 7.11 56.52 0.40 -6.55 16 24 H -0.27 -6.70 7.11 56.52 0.40 -6.30 16 25 H 0.09 0.97 8.14 -51.93 -0.42 0.55 16 26 H 0.08 0.66 8.14 -51.93 -0.42 0.24 16 27 H 0.09 0.84 8.14 -51.92 -0.42 0.42 16 28 H 0.15 1.83 7.59 -52.48 -0.40 1.43 16 29 H 0.15 0.95 8.06 -52.48 -0.42 0.53 16 30 H 0.15 1.21 8.06 -52.49 -0.42 0.78 16 31 H 0.02 0.55 8.14 -51.93 -0.42 0.13 16 32 H 0.04 1.00 8.14 -51.93 -0.42 0.58 16 33 H 0.26 7.32 8.31 -40.82 -0.34 6.98 16 LS Contribution 311.22 15.07 4.69 4.69 Total: -1.00 -34.77 311.22 -7.52 -42.29 By element: Atomic # 1 Polarization: -1.17 SS G_CDS: -3.29 Total: -4.45 kcal Atomic # 6 Polarization: 4.43 SS G_CDS: -3.49 Total: 0.94 kcal Atomic # 7 Polarization: -48.80 SS G_CDS: 1.01 Total: -47.79 kcal Atomic # 8 Polarization: -11.25 SS G_CDS: 0.09 Total: -11.16 kcal Atomic # 14 Polarization: 22.45 SS G_CDS: -5.02 Total: 17.43 kcal Atomic # 17 Polarization: -0.44 SS G_CDS: -1.51 Total: -1.95 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -34.77 -7.52 -42.29 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000871950746.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 99.885 kcal (2) G-P(sol) polarization free energy of solvation -34.770 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 65.116 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.521 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.290 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.595 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds