Wall clock time and date at job start Tue Mar 31 2020 07:13:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 N 1.27570 * 126.41613 * 2 1 4 4 N 1.39155 * 113.16542 * 179.97438 * 3 2 1 5 5 C 1.40051 * 124.43766 * 179.73030 * 4 3 2 6 6 C 1.39220 * 120.49160 * 95.02838 * 5 4 3 7 7 C 1.38555 * 118.37058 * 180.02562 * 6 5 4 8 8 C 1.38227 * 119.26581 * 359.97438 * 7 6 5 9 9 N 1.31896 * 120.93565 * 359.97438 * 8 7 6 10 10 C 1.31892 * 121.77909 * 359.71137 * 9 8 7 11 11 Cl 1.73597 * 119.68686 * 180.30963 * 10 9 8 12 12 C 1.34954 * 111.12089 * 0.02562 * 4 3 2 13 13 O 1.21299 * 127.50023 * 179.97438 * 12 4 3 14 14 C 1.51440 * 126.41868 * 179.97438 * 2 1 3 15 15 H 1.09005 * 110.60887 * 298.69576 * 14 2 1 16 16 C 1.52999 * 110.60765 * 61.50740 * 14 2 1 17 17 C 1.50700 * 109.47187 * 185.00179 * 16 14 2 18 18 H 1.07997 * 119.99989 * 359.97438 * 17 16 14 19 19 C 1.37879 * 119.99937 * 179.97438 * 17 16 14 20 20 N 1.31515 * 120.00095 * 179.97438 * 19 17 16 21 21 Si 1.86798 * 119.99880 * 0.02562 * 19 17 16 22 22 H 1.48506 * 109.47499 * 89.99947 * 21 19 17 23 23 H 1.48504 * 109.47071 * 209.99911 * 21 19 17 24 24 H 1.48497 * 109.47111 * 329.99537 * 21 19 17 25 25 H 1.08995 * 109.47600 * 0.02562 * 1 2 3 26 26 H 1.09001 * 109.47058 * 120.03202 * 1 2 3 27 27 H 1.09012 * 109.47141 * 240.02428 * 1 2 3 28 28 H 1.07997 * 120.81493 * 359.97438 * 6 5 4 29 29 H 1.08003 * 120.36715 * 180.02562 * 7 6 5 30 30 H 1.08004 * 119.53097 * 180.02562 * 8 7 6 31 31 H 1.08999 * 109.46935 * 304.99877 * 16 14 2 32 32 H 1.08997 * 109.47340 * 64.99774 * 16 14 2 33 33 H 0.97005 * 120.00094 * 180.02562 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2643 1.0266 0.0000 4 7 3.6188 0.7076 0.0006 5 6 4.6545 1.6504 -0.0047 6 6 5.2485 2.0540 1.1879 7 6 6.2690 2.9895 1.1316 8 6 6.6619 3.4878 -0.0964 9 7 6.0800 3.0847 -1.2093 10 6 5.1094 2.1918 -1.2017 11 17 4.3871 1.6942 -2.6998 12 6 3.8036 -0.6292 0.0004 13 8 4.8580 -1.2289 0.0004 14 6 2.4061 -1.2186 0.0005 15 1 2.2396 -1.8178 0.8958 16 6 2.1760 -2.0581 -1.2577 17 6 2.9906 -3.3232 -1.1735 18 1 3.6108 -3.5095 -0.3092 19 6 2.9442 -4.2426 -2.1999 20 7 3.6555 -5.3464 -2.1266 21 14 1.8722 -3.9199 -3.6951 22 1 2.6589 -3.1872 -4.7196 23 1 1.4072 -5.2125 -4.2592 24 1 0.6979 -3.1034 -3.2954 25 1 -0.3634 1.0276 -0.0005 26 1 -0.3633 -0.5143 -0.8897 27 1 -0.3634 -0.5135 0.8903 28 1 4.9214 1.6484 2.1339 29 1 6.7526 3.3250 2.0371 30 1 7.4572 4.2169 -0.1453 31 1 1.1188 -2.3114 -1.3372 32 1 2.4800 -1.4880 -2.1355 33 1 3.6232 -5.9931 -2.8489 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000871953452.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:13:13 Heat of formation + Delta-G solvation = 57.994490 kcal Electronic energy + Delta-G solvation = -20967.277949 eV Core-core repulsion = 17634.827972 eV Total energy + Delta-G solvation = -3332.449977 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 293.067 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -41.33810 -40.01908 -37.01625 -36.59312 -34.80195 -33.07233 -32.26117 -30.88881 -30.53837 -27.80263 -26.52419 -23.90842 -23.60416 -22.00858 -20.24720 -19.56111 -17.93770 -17.34310 -17.04179 -16.57462 -15.39572 -15.02565 -14.75330 -14.52717 -14.25111 -14.02037 -13.55444 -13.41437 -13.34254 -12.75157 -12.55644 -12.35705 -12.03688 -11.75082 -11.64947 -11.56642 -11.22391 -11.02142 -10.61254 -10.24043 -10.16111 -10.00441 -9.71364 -9.53508 -9.21947 -8.79905 -8.56824 -8.48541 -6.05897 -4.05529 0.61110 0.88541 1.79935 1.95019 2.46291 2.96588 3.27275 3.33661 3.34807 3.35551 4.29931 4.33489 4.40211 4.50383 4.56119 4.69640 4.81269 5.03506 5.21013 5.29665 5.57563 5.65712 5.68922 5.73061 5.77667 5.87408 5.99824 6.17766 6.39332 6.72476 6.86423 6.99570 7.46682 7.62075 7.89718 8.31673 8.46810 9.02480 9.52936 11.07314 Molecular weight = 293.07amu Principal moments of inertia in cm(-1) A = 0.018281 B = 0.005627 C = 0.005323 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1531.248666 B = 4974.392786 C = 5259.217541 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 C 0.105 3.895 3 N -0.245 5.245 4 N -0.447 5.447 5 C 0.136 3.864 6 C -0.049 4.049 7 C -0.164 4.164 8 C 0.120 3.880 9 N -0.473 5.473 10 C 0.188 3.812 11 Cl -0.011 7.011 12 C 0.516 3.484 13 O -0.461 6.461 14 C -0.117 4.117 15 H 0.132 0.868 16 C 0.018 3.982 17 C -0.520 4.520 18 H 0.082 0.918 19 C 0.073 3.927 20 N -0.895 5.895 21 Si 0.871 3.129 22 H -0.277 1.277 23 H -0.285 1.285 24 H -0.264 1.264 25 H 0.078 0.922 26 H 0.092 0.908 27 H 0.089 0.911 28 H 0.147 0.853 29 H 0.149 0.851 30 H 0.170 0.830 31 H 0.039 0.961 32 H 0.015 0.985 33 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.363 17.650 6.915 19.103 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.088 4.088 3 N -0.050 5.050 4 N -0.265 5.265 5 C 0.042 3.958 6 C -0.077 4.077 7 C -0.185 4.185 8 C -0.037 4.037 9 N -0.185 5.185 10 C 0.022 3.978 11 Cl 0.018 6.982 12 C 0.304 3.696 13 O -0.327 6.327 14 C -0.141 4.141 15 H 0.150 0.850 16 C -0.020 4.020 17 C -0.557 4.557 18 H 0.100 0.900 19 C -0.129 4.129 20 N -0.533 5.533 21 Si 0.698 3.302 22 H -0.203 1.203 23 H -0.211 1.211 24 H -0.188 1.188 25 H 0.097 0.903 26 H 0.110 0.890 27 H 0.108 0.892 28 H 0.165 0.835 29 H 0.167 0.833 30 H 0.187 0.813 31 H 0.057 0.943 32 H 0.034 0.966 33 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -1.275 18.443 5.882 19.400 hybrid contribution -0.554 -1.070 -0.289 1.239 sum -1.829 17.372 5.593 18.342 Atomic orbital electron populations 1.20356 0.84842 1.03870 1.04355 1.25581 0.97454 0.91770 0.93999 1.74753 0.87572 1.26507 1.16181 1.46935 1.01823 1.04946 1.72813 1.17739 0.91489 0.94366 0.92165 1.21854 0.93979 0.94120 0.97724 1.22166 0.97998 0.98173 1.00148 1.22788 0.97145 0.97168 0.86620 1.67129 1.07707 1.11389 1.32226 1.22229 0.93452 0.94114 0.88009 1.98444 1.80163 1.88601 1.31036 1.21554 0.92361 0.80770 0.74953 1.90789 1.31045 1.65033 1.45828 1.21821 0.90131 0.96016 1.06100 0.85018 1.19383 0.98655 0.94903 0.89096 1.21000 1.26765 1.00909 1.07068 0.90036 1.24931 0.95218 0.94924 0.97822 1.69898 1.40562 1.09741 1.33131 0.86929 0.81548 0.77901 0.83850 1.20308 1.21062 1.18843 0.90320 0.88987 0.89241 0.83532 0.83316 0.81260 0.94273 0.96646 0.92625 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.79 10.47 36.00 0.38 -0.41 16 2 C 0.11 1.61 6.93 -78.73 -0.55 1.07 16 3 N -0.25 -4.07 11.97 35.53 0.43 -3.65 16 4 N -0.45 -8.24 2.96 -9.36 -0.03 -8.27 16 5 C 0.14 2.29 5.79 -83.45 -0.48 1.81 16 6 C -0.05 -0.64 10.11 -39.10 -0.40 -1.03 16 7 C -0.16 -1.61 10.10 -39.47 -0.40 -2.01 16 8 C 0.12 1.30 11.17 -17.53 -0.20 1.10 16 9 N -0.47 -7.09 10.33 -10.20 -0.11 -7.20 16 10 C 0.19 3.22 7.29 -17.24 -0.13 3.10 16 11 Cl -0.01 -0.20 28.60 -51.86 -1.48 -1.69 16 12 C 0.52 11.08 7.55 -10.42 -0.08 11.01 16 13 O -0.46 -11.72 17.07 5.54 0.09 -11.63 16 14 C -0.12 -2.26 2.96 -92.08 -0.27 -2.53 16 15 H 0.13 2.38 8.14 -51.93 -0.42 1.96 16 16 C 0.02 0.41 3.55 -27.88 -0.10 0.31 16 17 C -0.52 -14.64 9.00 -34.44 -0.31 -14.95 16 18 H 0.08 2.54 7.68 -52.49 -0.40 2.14 16 19 C 0.07 2.12 5.47 -17.82 -0.10 2.02 16 20 N -0.90 -27.74 13.96 55.43 0.77 -26.96 16 21 Si 0.87 21.32 27.47 -169.99 -4.67 16.65 16 22 H -0.28 -6.88 7.11 56.52 0.40 -6.48 16 23 H -0.28 -6.88 7.11 56.52 0.40 -6.48 16 24 H -0.26 -5.92 6.54 56.52 0.37 -5.55 16 25 H 0.08 0.70 8.14 -51.93 -0.42 0.27 16 26 H 0.09 0.95 8.04 -51.93 -0.42 0.53 16 27 H 0.09 0.74 8.14 -51.92 -0.42 0.32 16 28 H 0.15 1.64 8.06 -52.49 -0.42 1.22 16 29 H 0.15 0.87 8.06 -52.48 -0.42 0.44 16 30 H 0.17 1.13 8.06 -52.48 -0.42 0.71 16 31 H 0.04 0.82 7.07 -51.93 -0.37 0.45 16 32 H 0.02 0.37 7.55 -51.93 -0.39 -0.02 16 33 H 0.26 7.64 8.31 -40.82 -0.34 7.30 16 LS Contribution 310.77 15.07 4.68 4.68 Total: -1.00 -35.55 310.77 -6.22 -41.77 By element: Atomic # 1 Polarization: 0.10 SS G_CDS: -3.28 Total: -3.18 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -2.63 Total: -0.52 kcal Atomic # 7 Polarization: -47.14 SS G_CDS: 1.07 Total: -46.08 kcal Atomic # 8 Polarization: -11.72 SS G_CDS: 0.09 Total: -11.63 kcal Atomic # 14 Polarization: 21.32 SS G_CDS: -4.67 Total: 16.65 kcal Atomic # 17 Polarization: -0.20 SS G_CDS: -1.48 Total: -1.69 kcal Total LS contribution 4.68 Total: 4.68 kcal Total: -35.55 -6.22 -41.77 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000871953452.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 99.760 kcal (2) G-P(sol) polarization free energy of solvation -35.548 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 64.212 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.217 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.766 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.994 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds