Wall clock time and date at job start Tue Mar 31 2020 07:13:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 N 1.27567 * 126.41392 * 2 1 4 4 N 1.39154 * 113.16402 * 180.02562 * 3 2 1 5 5 C 1.39639 * 124.43748 * 179.97438 * 4 3 2 6 6 C 1.39466 * 120.85634 * 0.02907 * 5 4 3 7 7 C 1.37896 * 119.10401 * 180.02562 * 6 5 4 8 8 N 1.31999 * 120.86218 * 359.97438 * 7 6 5 9 9 C 1.32046 * 121.87546 * 0.02562 * 8 7 6 10 10 Cl 1.73605 * 119.59765 * 180.02562 * 9 8 7 11 11 C 1.38152 * 120.80472 * 359.71777 * 9 8 7 12 12 C 1.35306 * 111.15858 * 359.90926 * 4 3 2 13 13 O 1.21294 * 127.67414 * 180.09402 * 12 4 3 14 14 C 1.51442 * 126.41900 * 180.02562 * 2 1 3 15 15 H 1.09007 * 110.60608 * 298.65602 * 14 2 1 16 16 C 1.53000 * 110.60433 * 61.46499 * 14 2 1 17 17 C 1.50703 * 109.46912 * 182.84918 * 16 14 2 18 18 H 1.07996 * 119.99751 * 0.02562 * 17 16 14 19 19 C 1.37877 * 120.00001 * 180.02562 * 17 16 14 20 20 N 1.31517 * 120.00094 * 359.97438 * 19 17 16 21 21 Si 1.86803 * 119.99955 * 180.02562 * 19 17 16 22 22 H 1.48494 * 109.47116 * 59.99536 * 21 19 17 23 23 H 1.48500 * 109.46585 * 179.97438 * 21 19 17 24 24 H 1.48496 * 109.46730 * 299.99515 * 21 19 17 25 25 H 1.09002 * 109.47444 * 269.97421 * 1 2 3 26 26 H 1.08998 * 109.47283 * 29.98280 * 1 2 3 27 27 H 1.09007 * 109.46552 * 149.97694 * 1 2 3 28 28 H 1.07998 * 120.44851 * 359.97438 * 6 5 4 29 29 H 1.08007 * 119.57216 * 179.97438 * 7 6 5 30 30 H 1.08001 * 120.47073 * 180.28854 * 11 9 8 31 31 H 1.09002 * 109.47398 * 302.84996 * 16 14 2 32 32 H 1.09001 * 109.47194 * 62.85176 * 16 14 2 33 33 H 0.97000 * 120.00333 * 179.97438 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2643 1.0266 0.0000 4 7 3.6188 0.7077 -0.0006 5 6 4.6514 1.6477 -0.0012 6 6 4.3744 3.0145 -0.0007 7 6 5.4220 3.9112 -0.0019 8 7 6.6732 3.4907 -0.0030 9 6 6.9769 2.2056 -0.0035 10 17 8.6432 1.7184 -0.0043 11 6 5.9849 1.2442 0.0030 12 6 3.8049 -0.6325 0.0010 13 8 4.8579 -1.2347 0.0026 14 6 2.4061 -1.2187 -0.0005 15 1 2.2401 -1.8183 0.8945 16 6 2.1753 -2.0575 -1.2591 17 6 3.0301 -3.2972 -1.2002 18 1 3.6733 -3.4697 -0.3500 19 6 2.9910 -4.2112 -2.2318 20 7 2.2074 -4.0014 -3.2669 21 14 4.0501 -5.7482 -2.1585 22 1 3.6846 -6.5445 -0.9595 23 1 3.8261 -6.5623 -3.3801 24 1 5.4811 -5.3598 -2.0774 25 1 -0.3634 -0.0005 1.0277 26 1 -0.3634 0.8901 -0.5135 27 1 -0.3633 -0.8899 -0.5142 28 1 3.3532 3.3660 -0.0002 29 1 5.2161 4.9715 -0.0019 30 1 6.2395 0.1946 0.0072 31 1 1.1249 -2.3429 -1.3180 32 1 2.4429 -1.4731 -2.1394 33 1 2.1801 -4.6442 -3.9928 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000871953531.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:13:28 Heat of formation + Delta-G solvation = 49.224381 kcal Electronic energy + Delta-G solvation = -20593.160146 eV Core-core repulsion = 17260.329868 eV Total energy + Delta-G solvation = -3332.830278 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 293.067 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -41.55221 -39.86782 -37.34264 -36.66163 -34.98537 -33.21590 -31.28587 -31.07238 -30.65099 -28.11559 -26.33746 -24.05224 -23.38774 -22.30634 -20.34461 -19.75324 -18.07755 -16.64151 -16.30119 -15.95892 -15.91514 -15.48431 -14.81076 -14.61258 -14.56009 -14.17005 -13.74701 -13.55077 -13.33616 -12.55344 -12.48833 -12.22583 -12.07666 -11.75514 -11.65176 -11.57898 -11.30360 -11.08006 -10.77806 -10.50087 -10.26922 -9.92180 -9.72023 -9.46744 -9.07166 -9.04334 -8.49596 -8.24795 -6.15272 -4.18256 0.88312 1.00918 1.71976 1.79826 2.32762 2.86423 3.29887 3.33754 3.39156 3.69828 3.99030 4.28651 4.42670 4.47859 4.80808 4.90466 5.02635 5.16339 5.23028 5.36354 5.50001 5.57350 5.64919 5.74118 5.82302 6.00431 6.11511 6.22856 6.39442 6.67252 7.21674 7.25797 7.68185 7.71346 7.82130 8.04117 8.11463 8.86418 9.47658 10.95667 Molecular weight = 293.07amu Principal moments of inertia in cm(-1) A = 0.014656 B = 0.005187 C = 0.003998 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1910.082314 B = 5396.669696 C = 7000.948169 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 C 0.130 3.870 3 N -0.262 5.262 4 N -0.426 5.426 5 C 0.245 3.755 6 C -0.193 4.193 7 C 0.137 3.863 8 N -0.502 5.502 9 C 0.202 3.798 10 Cl -0.028 7.028 11 C -0.196 4.196 12 C 0.511 3.489 13 O -0.453 6.453 14 C -0.131 4.131 15 H 0.132 0.868 16 C 0.054 3.946 17 C -0.523 4.523 18 H 0.065 0.935 19 C 0.063 3.937 20 N -0.895 5.895 21 Si 0.896 3.104 22 H -0.275 1.275 23 H -0.287 1.287 24 H -0.275 1.275 25 H 0.089 0.911 26 H 0.083 0.917 27 H 0.098 0.902 28 H 0.152 0.848 29 H 0.169 0.831 30 H 0.171 0.829 31 H 0.043 0.957 32 H 0.021 0.979 33 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.999 12.741 7.459 14.798 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.062 4.062 3 N -0.068 5.068 4 N -0.235 5.235 5 C 0.141 3.859 6 C -0.216 4.216 7 C -0.020 4.020 8 N -0.216 5.216 9 C 0.038 3.962 10 Cl 0.000 7.000 11 C -0.220 4.220 12 C 0.300 3.700 13 O -0.320 6.320 14 C -0.155 4.155 15 H 0.150 0.850 16 C 0.016 3.984 17 C -0.561 4.561 18 H 0.083 0.917 19 C -0.139 4.139 20 N -0.534 5.534 21 Si 0.724 3.276 22 H -0.200 1.200 23 H -0.212 1.212 24 H -0.200 1.200 25 H 0.108 0.892 26 H 0.101 0.899 27 H 0.116 0.884 28 H 0.170 0.830 29 H 0.186 0.814 30 H 0.189 0.811 31 H 0.061 0.939 32 H 0.040 0.960 33 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 0.534 13.842 7.289 15.653 hybrid contribution 0.188 -2.232 -0.141 2.244 sum 0.722 11.610 7.148 13.653 Atomic orbital electron populations 1.20439 0.84325 1.05078 1.03923 1.25748 0.97744 0.91651 0.91075 1.74712 0.87027 1.26521 1.18507 1.47263 1.02841 1.05821 1.67599 1.17700 0.85842 0.88875 0.93447 1.21921 1.02439 0.91125 1.06108 1.22456 0.85610 1.00146 0.93765 1.67020 1.22737 1.16022 1.15833 1.21222 0.87085 0.89527 0.98415 1.98401 1.15068 1.90084 1.96413 1.22042 0.89896 1.03474 1.06611 1.21802 0.92760 0.80833 0.74577 1.90674 1.31074 1.65146 1.45096 1.22169 0.89431 0.96459 1.07406 0.85022 1.18969 0.99050 0.93319 0.87079 1.21093 1.24716 1.04394 1.05938 0.91664 1.24945 0.95415 0.98465 0.95107 1.69928 1.38290 1.36577 1.08581 0.86569 0.81159 0.82510 0.77378 1.20033 1.21237 1.20008 0.89213 0.89850 0.88372 0.83019 0.81386 0.81144 0.93862 0.96044 0.92679 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.79 10.49 36.01 0.38 -0.41 16 2 C 0.13 1.93 6.93 -78.72 -0.55 1.38 16 3 N -0.26 -4.17 11.29 35.53 0.40 -3.77 16 4 N -0.43 -7.72 3.72 -9.25 -0.03 -7.76 16 5 C 0.25 4.12 6.70 -83.44 -0.56 3.56 16 6 C -0.19 -2.60 9.69 -39.25 -0.38 -2.98 16 7 C 0.14 1.67 11.17 -17.60 -0.20 1.47 16 8 N -0.50 -7.42 10.34 -10.44 -0.11 -7.52 16 9 C 0.20 3.18 7.27 -17.49 -0.13 3.06 16 10 Cl -0.03 -0.41 29.10 -51.86 -1.51 -1.91 16 11 C -0.20 -3.37 9.17 -39.21 -0.36 -3.73 16 12 C 0.51 10.52 7.46 -10.27 -0.08 10.44 16 13 O -0.45 -10.49 14.20 5.54 0.08 -10.41 16 14 C -0.13 -2.44 2.98 -92.08 -0.27 -2.72 16 15 H 0.13 2.26 8.14 -51.93 -0.42 1.84 16 16 C 0.05 1.25 4.49 -27.88 -0.13 1.12 16 17 C -0.52 -13.99 8.39 -34.44 -0.29 -14.27 16 18 H 0.07 1.76 7.24 -52.49 -0.38 1.39 16 19 C 0.06 1.73 5.46 -17.82 -0.10 1.63 16 20 N -0.90 -25.49 13.29 55.43 0.74 -24.75 16 21 Si 0.90 21.48 29.54 -169.99 -5.02 16.46 16 22 H -0.27 -6.40 7.11 56.52 0.40 -6.00 16 23 H -0.29 -6.76 7.11 56.52 0.40 -6.36 16 24 H -0.27 -6.70 7.11 56.52 0.40 -6.30 16 25 H 0.09 0.68 8.14 -51.93 -0.42 0.25 16 26 H 0.08 0.72 8.14 -51.93 -0.42 0.30 16 27 H 0.10 1.00 7.50 -51.93 -0.39 0.61 16 28 H 0.15 1.78 7.70 -52.49 -0.40 1.38 16 29 H 0.17 1.37 8.06 -52.48 -0.42 0.95 16 30 H 0.17 3.23 5.51 -52.49 -0.29 2.94 16 31 H 0.04 0.98 7.50 -51.93 -0.39 0.59 16 32 H 0.02 0.55 8.14 -51.93 -0.42 0.13 16 33 H 0.26 7.16 8.31 -40.82 -0.34 6.82 16 LS Contribution 307.39 15.07 4.63 4.63 Total: -1.00 -31.38 307.39 -6.58 -37.96 By element: Atomic # 1 Polarization: 1.63 SS G_CDS: -3.10 Total: -1.47 kcal Atomic # 6 Polarization: 1.20 SS G_CDS: -2.65 Total: -1.45 kcal Atomic # 7 Polarization: -44.80 SS G_CDS: 1.00 Total: -43.80 kcal Atomic # 8 Polarization: -10.49 SS G_CDS: 0.08 Total: -10.41 kcal Atomic # 14 Polarization: 21.48 SS G_CDS: -5.02 Total: 16.46 kcal Atomic # 17 Polarization: -0.41 SS G_CDS: -1.51 Total: -1.91 kcal Total LS contribution 4.63 Total: 4.63 kcal Total: -31.38 -6.58 -37.96 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000871953531.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.182 kcal (2) G-P(sol) polarization free energy of solvation -31.379 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.803 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.578 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.957 kcal (6) G-S(sol) free energy of system = (1) + (5) 49.224 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds