Wall clock time and date at job start Tue Mar 31 2020 07:12:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 N 1.33275 * 125.51510 * 2 1 4 4 C 1.30962 * 109.80570 * 180.02562 * 3 2 1 5 5 Cl 1.73604 * 125.98539 * 179.97438 * 4 3 2 6 6 N 1.34523 * 108.03669 * 0.02562 * 4 3 2 7 7 C 1.46498 * 126.82459 * 180.02562 * 6 4 3 8 8 C 1.50701 * 109.47235 * 89.99733 * 7 6 4 9 9 C 1.38305 * 119.92910 * 270.25475 * 8 7 6 10 10 C 1.38104 * 120.06272 * 180.25358 * 9 8 7 11 11 C 1.38874 * 119.93265 * 359.47314 * 10 9 8 12 12 O 1.35749 * 120.06890 * 180.29770 * 11 10 9 13 13 C 1.34834 * 117.00013 * 354.46142 * 12 11 10 14 14 H 1.07996 * 120.00021 * 5.05939 * 13 12 11 15 15 C 1.38654 * 119.99707 * 185.05824 * 13 12 11 16 16 N 1.31550 * 120.00182 * 359.97438 * 15 13 12 17 17 Si 1.86800 * 119.99577 * 180.02562 * 15 13 12 18 18 H 1.48499 * 109.47369 * 59.99976 * 17 15 13 19 19 H 1.48494 * 109.47142 * 180.02562 * 17 15 13 20 20 H 1.48500 * 109.47275 * 300.00018 * 17 15 13 21 21 C 1.38882 * 119.86301 * 0.27303 * 11 10 9 22 22 C 1.38094 * 119.92975 * 0.02562 * 21 11 10 23 23 N 1.30683 * 125.51281 * 180.33301 * 2 1 3 24 24 H 1.09003 * 109.46992 * 90.02501 * 1 2 3 25 25 H 1.08997 * 109.47032 * 210.02123 * 1 2 3 26 26 H 1.08998 * 109.47186 * 330.02275 * 1 2 3 27 27 H 1.09006 * 109.47116 * 329.99883 * 7 6 4 28 28 H 1.08998 * 109.47244 * 210.00037 * 7 6 4 29 29 H 1.07990 * 119.96792 * 0.02562 * 9 8 7 30 30 H 1.08000 * 120.02708 * 179.74272 * 10 9 8 31 31 H 0.97006 * 119.99724 * 179.97438 * 16 15 13 32 32 H 1.08005 * 120.03486 * 180.02562 * 21 11 10 33 33 H 1.08006 * 119.96521 * 180.02562 * 22 21 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2812 1.0848 0.0000 4 6 3.5419 0.7302 -0.0006 5 17 4.9042 1.8063 -0.0014 6 7 3.5965 -0.6139 -0.0015 7 6 4.8039 -1.4436 -0.0018 8 6 5.2177 -1.7291 1.4189 9 6 6.0819 -0.8691 2.0719 10 6 6.4670 -1.1309 3.3721 11 6 5.9770 -2.2530 4.0274 12 8 6.3490 -2.5097 5.3075 13 6 7.2841 -1.7018 5.8469 14 1 7.6419 -0.8457 5.2942 15 6 7.7861 -1.9701 7.1112 16 7 7.3498 -3.0126 7.7846 17 14 9.0810 -0.8504 7.8588 18 1 8.5381 0.5270 7.9733 19 1 9.4497 -1.3514 9.2072 20 1 10.2853 -0.8371 6.9899 21 6 5.1053 -3.1118 3.3706 22 6 4.7288 -2.8479 2.0684 23 7 2.2661 -1.0637 -0.0062 24 1 -0.3633 -0.0004 -1.0277 25 1 -0.3633 -0.8898 0.5141 26 1 -0.3633 0.8902 0.5135 27 1 5.6076 -0.9155 -0.5152 28 1 4.5994 -2.3825 -0.5164 29 1 6.4587 0.0058 1.5635 30 1 7.1451 -0.4612 3.8801 31 1 7.7014 -3.2005 8.6689 32 1 4.7222 -3.9850 3.8777 33 1 4.0505 -3.5151 1.5573 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000919732945.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:12:52 Heat of formation + Delta-G solvation = 80.738255 kcal Electronic energy + Delta-G solvation = -20067.745827 eV Core-core repulsion = 16736.282093 eV Total energy + Delta-G solvation = -3331.463734 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 293.067 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -42.14983 -39.21261 -37.30143 -36.99639 -34.41715 -32.43808 -31.73042 -30.58153 -30.30108 -28.31365 -25.94716 -24.98199 -22.27844 -22.12297 -20.84554 -20.64990 -18.13816 -17.43819 -16.99738 -16.27003 -15.68641 -14.92998 -14.72245 -14.52394 -13.93709 -13.75041 -13.70778 -13.24498 -13.12264 -12.90822 -12.61416 -12.55456 -12.11399 -12.04287 -11.70825 -11.52285 -11.38703 -11.20352 -10.94377 -10.78571 -10.53949 -10.15885 -9.77886 -9.48797 -9.37704 -8.96179 -8.35056 -7.41813 -6.57892 -4.16675 0.94058 1.40889 1.88521 2.08061 2.68713 2.71345 3.06517 3.07841 3.10458 3.86617 4.22397 4.37544 4.44741 4.96258 4.97831 5.02132 5.14736 5.30842 5.41515 5.49534 5.56640 5.62493 5.70213 6.05534 6.07780 6.25608 6.31303 6.45907 6.52643 6.72353 6.88544 7.06891 7.16238 7.28476 7.63797 7.86379 7.88800 8.86903 9.53712 10.59210 Molecular weight = 293.07amu Principal moments of inertia in cm(-1) A = 0.021750 B = 0.003757 C = 0.003514 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1287.038854 B = 7450.263838 C = 7966.815555 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 C 0.221 3.779 3 N -0.527 5.527 4 C 0.313 3.687 5 Cl 0.049 6.951 6 N -0.346 5.346 7 C 0.179 3.821 8 C -0.229 4.229 9 C -0.046 4.046 10 C -0.237 4.237 11 C 0.165 3.835 12 O -0.169 6.169 13 C -0.395 4.395 14 H 0.094 0.906 15 C 0.042 3.958 16 N -0.857 5.857 17 Si 0.943 3.057 18 H -0.268 1.268 19 H -0.276 1.276 20 H -0.268 1.268 21 C -0.196 4.196 22 C -0.041 4.041 23 N -0.294 5.294 24 H 0.083 0.917 25 H 0.084 0.916 26 H 0.086 0.914 27 H 0.099 0.901 28 H 0.104 0.896 29 H 0.107 0.893 30 H 0.130 0.870 31 H 0.273 0.727 32 H 0.120 0.880 33 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.818 5.722 -15.281 17.323 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.060 4.060 3 N -0.259 5.259 4 C 0.012 3.988 5 Cl 0.076 6.924 6 N -0.139 5.139 7 C 0.060 3.940 8 C -0.232 4.232 9 C -0.065 4.065 10 C -0.256 4.256 11 C 0.110 3.890 12 O -0.071 6.071 13 C -0.471 4.471 14 H 0.111 0.889 15 C -0.164 4.164 16 N -0.491 5.491 17 Si 0.767 3.233 18 H -0.193 1.193 19 H -0.201 1.201 20 H -0.193 1.193 21 C -0.215 4.215 22 C -0.060 4.060 23 N -0.124 5.124 24 H 0.102 0.898 25 H 0.103 0.897 26 H 0.105 0.895 27 H 0.117 0.883 28 H 0.122 0.878 29 H 0.125 0.875 30 H 0.148 0.852 31 H 0.083 0.917 32 H 0.138 0.862 33 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -6.013 5.075 -14.877 16.829 hybrid contribution 1.245 0.793 0.482 1.553 sum -4.768 5.869 -14.395 16.260 Atomic orbital electron populations 1.20095 0.83476 1.04284 1.03665 1.24181 0.98223 0.85126 0.98496 1.70288 0.98319 1.31238 1.26023 1.24309 0.90755 0.82768 1.01007 1.98446 1.36758 1.60494 1.96693 1.50954 1.06743 1.03808 1.52424 1.20680 0.81449 0.95399 0.96469 1.19143 1.07681 1.00662 0.95684 1.20614 0.95144 0.96690 0.94083 1.21119 1.07622 1.00858 0.96014 1.19448 0.92168 0.92251 0.85163 1.83977 1.51134 1.51863 1.20117 1.21339 1.17167 1.07938 1.00662 0.88878 1.25337 0.98266 0.97218 0.95550 1.70026 1.40851 1.25613 1.12561 0.85751 0.79732 0.79358 0.78467 1.19344 1.20124 1.19344 1.20206 1.04382 1.01837 0.95111 1.20493 0.96483 0.95519 0.93521 1.78142 0.85986 1.21874 1.26412 0.89844 0.89742 0.89471 0.88282 0.87776 0.87487 0.85242 0.91710 0.86203 0.86743 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.53 10.51 36.01 0.38 -0.15 16 2 C 0.22 3.17 8.14 -156.85 -1.28 1.89 16 3 N -0.53 -8.19 11.20 -9.06 -0.10 -8.29 16 4 C 0.31 4.65 8.59 -90.46 -0.78 3.87 16 5 Cl 0.05 0.60 28.38 -51.86 -1.47 -0.88 16 6 N -0.35 -5.14 3.62 -60.53 -0.22 -5.36 16 7 C 0.18 2.33 6.46 -5.19 -0.03 2.30 16 8 C -0.23 -3.74 5.47 -104.57 -0.57 -4.31 16 9 C -0.05 -0.81 9.69 -39.61 -0.38 -1.19 16 10 C -0.24 -4.96 9.17 -39.40 -0.36 -5.32 16 11 C 0.17 3.89 6.65 -39.11 -0.26 3.63 16 12 O -0.17 -4.71 9.76 0.04 0.00 -4.71 16 13 C -0.40 -10.75 9.49 30.89 0.29 -10.46 16 14 H 0.09 2.33 5.20 -52.49 -0.27 2.05 16 15 C 0.04 1.12 5.49 -17.52 -0.10 1.02 16 16 N -0.86 -24.54 13.67 55.48 0.76 -23.78 16 17 Si 0.94 19.94 29.55 -169.99 -5.02 14.92 16 18 H -0.27 -5.52 7.11 56.52 0.40 -5.11 16 19 H -0.28 -5.72 7.11 56.52 0.40 -5.31 16 20 H -0.27 -5.48 7.11 56.52 0.40 -5.08 16 21 C -0.20 -4.05 9.99 -39.40 -0.39 -4.45 16 22 C -0.04 -0.72 9.69 -39.61 -0.38 -1.11 16 23 N -0.29 -4.54 12.70 32.42 0.41 -4.13 16 24 H 0.08 0.63 8.14 -51.93 -0.42 0.21 16 25 H 0.08 0.72 8.14 -51.93 -0.42 0.30 16 26 H 0.09 0.75 8.14 -51.93 -0.42 0.32 16 27 H 0.10 1.05 7.80 -51.93 -0.40 0.65 16 28 H 0.10 1.18 8.08 -51.93 -0.42 0.76 16 29 H 0.11 1.58 7.59 -52.49 -0.40 1.18 16 30 H 0.13 2.71 5.64 -52.49 -0.30 2.41 16 31 H 0.27 7.17 8.31 -40.82 -0.34 6.83 16 32 H 0.12 2.40 8.06 -52.48 -0.42 1.98 16 33 H 0.11 1.74 8.06 -52.48 -0.42 1.32 16 LS Contribution 312.71 15.07 4.71 4.71 Total: -1.00 -31.46 312.71 -7.84 -39.30 By element: Atomic # 1 Polarization: 5.54 SS G_CDS: -3.04 Total: 2.50 kcal Atomic # 6 Polarization: -10.42 SS G_CDS: -3.87 Total: -14.29 kcal Atomic # 7 Polarization: -42.40 SS G_CDS: 0.85 Total: -41.55 kcal Atomic # 8 Polarization: -4.71 SS G_CDS: 0.00 Total: -4.71 kcal Atomic # 14 Polarization: 19.94 SS G_CDS: -5.02 Total: 14.92 kcal Atomic # 17 Polarization: 0.60 SS G_CDS: -1.47 Total: -0.88 kcal Total LS contribution 4.71 Total: 4.71 kcal Total: -31.46 -7.84 -39.30 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000919732945.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 120.037 kcal (2) G-P(sol) polarization free energy of solvation -31.459 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 88.579 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.840 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.299 kcal (6) G-S(sol) free energy of system = (1) + (5) 80.738 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds