Wall clock time and date at job start Tue Mar 31 2020 06:55:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 O 1.21286 * 120.00289 * 2 1 4 4 C 1.46833 * 119.99758 * 180.02562 * 2 1 3 5 5 C 1.39656 * 120.15057 * 5.55457 * 4 2 1 6 6 C 1.39214 * 119.72599 * 180.27788 * 5 4 2 7 7 C 1.43193 * 119.98558 * 179.75123 * 6 5 4 8 8 N 5.93956 * 85.05798 * 183.04932 * 2 1 3 9 9 C 1.40048 * 120.02627 * 359.76657 * 6 5 4 10 10 C 1.37658 * 120.30739 * 0.02562 * 9 6 5 11 11 C 1.38891 * 120.27350 * 359.97220 * 10 9 6 12 12 O 1.35476 * 120.01835 * 180.02562 * 11 10 9 13 13 C 1.42901 * 116.99925 * 5.64377 * 12 11 10 14 14 H 1.09002 * 109.46752 * 21.73229 * 13 12 11 15 15 C 1.50701 * 109.47139 * 141.73438 * 13 12 11 16 16 H 1.07993 * 119.99983 * 0.02562 * 15 13 12 17 17 C 1.37872 * 119.99561 * 179.97438 * 15 13 12 18 18 N 1.31516 * 119.99613 * 180.02562 * 17 15 13 19 19 Si 1.86801 * 120.00376 * 0.02562 * 17 15 13 20 20 H 1.48501 * 109.47010 * 269.99879 * 19 17 15 21 21 H 1.48494 * 109.47118 * 30.00091 * 19 17 15 22 22 H 1.48505 * 109.47065 * 150.00128 * 19 17 15 23 23 C 1.52999 * 109.46706 * 261.73473 * 13 12 11 24 24 Cl 1.80299 * 109.47153 * 65.00330 * 23 13 12 25 25 H 1.08999 * 109.47243 * 174.91843 * 1 2 3 26 26 H 1.08997 * 109.47350 * 294.92208 * 1 2 3 27 27 H 1.08998 * 109.47153 * 54.91689 * 1 2 3 28 28 H 1.08000 * 120.13431 * 0.02906 * 5 4 2 29 29 H 1.08001 * 119.84910 * 179.97438 * 9 6 5 30 30 H 1.07996 * 119.86474 * 179.97438 * 10 9 6 31 31 H 0.97008 * 119.99981 * 180.02562 * 18 17 15 32 32 H 1.09007 * 109.46823 * 184.99746 * 23 13 12 33 33 H 1.08994 * 109.47309 * 304.99524 * 23 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1135 1.0503 0.0000 4 6 2.2411 -1.2716 -0.0006 5 6 1.5509 -2.4800 -0.1180 6 6 2.2553 -3.6808 -0.1117 7 6 1.5527 -4.9232 -0.2264 8 7 0.9953 -5.9091 -0.3148 9 6 3.6507 -3.6741 0.0071 10 6 4.3327 -2.4835 0.1186 11 6 3.6426 -1.2782 0.1137 12 8 4.3190 -0.1095 0.2232 13 6 5.7461 -0.1827 0.2154 14 1 6.0595 -1.1149 -0.2548 15 6 6.3047 0.9832 -0.5591 16 1 5.6368 1.7078 -1.0007 17 6 7.6685 1.1252 -0.7029 18 7 8.1560 2.1429 -1.3783 19 14 8.8239 -0.1278 0.0617 20 1 9.1750 0.2990 1.4400 21 1 8.1557 -1.4531 0.1089 22 1 10.0596 -0.2254 -0.7562 23 6 6.2670 -0.1364 1.6532 24 17 5.7187 -1.6081 2.5388 25 1 -0.3634 -1.0236 -0.0910 26 1 -0.3634 0.4330 0.9319 27 1 -0.3633 0.5907 -0.8409 28 1 0.4748 -2.4831 -0.2093 29 1 4.1942 -4.6073 0.0121 30 1 5.4087 -2.4867 0.2102 31 1 9.1156 2.2427 -1.4798 32 1 7.3565 -0.1027 1.6441 33 1 5.8802 0.7526 2.1513 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001226975835.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:55:29 Heat of formation + Delta-G solvation = -18.617342 kcal Electronic energy + Delta-G solvation = -20810.975279 eV Core-core repulsion = 17442.910412 eV Total energy + Delta-G solvation = -3368.064867 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 293.061 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -40.43022 -38.44554 -37.85253 -36.07614 -35.42221 -33.50102 -32.13417 -31.03432 -30.02867 -29.10706 -25.37067 -24.06811 -23.61209 -21.60678 -20.17053 -18.17546 -17.89308 -17.06094 -16.16562 -15.60187 -15.34418 -15.00850 -14.81689 -14.45178 -14.04678 -13.85812 -13.76669 -13.44858 -13.40156 -13.13641 -12.75450 -12.34344 -12.30675 -12.19927 -11.92444 -11.76560 -11.44652 -11.33481 -11.02247 -10.92396 -10.26013 -10.04653 -9.78044 -9.56511 -9.30697 -9.06065 -8.99730 -7.95625 -6.50898 -4.56674 0.77493 0.98434 2.49339 2.65609 2.71404 2.91197 3.00569 3.08705 3.12778 3.60098 3.90190 3.92351 3.94773 4.18974 4.71569 4.74341 4.86665 5.10022 5.18749 5.37714 5.45957 5.46998 5.52067 5.66316 5.70636 5.79820 5.93356 5.98058 6.24006 6.27540 6.45571 6.60178 7.00060 7.48664 7.66004 7.87906 8.14467 8.64915 9.01100 10.60319 Molecular weight = 293.06amu Principal moments of inertia in cm(-1) A = 0.016344 B = 0.005919 C = 0.005042 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1712.733319 B = 4729.075179 C = 5552.115693 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C 0.388 3.612 3 O -0.426 6.426 4 C -0.222 4.222 5 C 0.010 3.990 6 C -0.105 4.105 7 C 0.270 3.730 8 N -0.440 5.440 9 C -0.003 4.003 10 C -0.215 4.215 11 C 0.239 3.761 12 O -0.253 6.253 13 C 0.176 3.824 14 H 0.053 0.947 15 C -0.526 4.526 16 H 0.099 0.901 17 C 0.084 3.916 18 N -0.870 5.870 19 Si 0.859 3.141 20 H -0.267 1.267 21 H -0.257 1.257 22 H -0.279 1.279 23 C -0.055 4.055 24 Cl -0.221 7.221 25 H 0.078 0.922 26 H 0.092 0.908 27 H 0.090 0.910 28 H 0.144 0.856 29 H 0.134 0.866 30 H 0.151 0.849 31 H 0.274 0.726 32 H 0.092 0.908 33 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.932 -7.740 3.993 12.476 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.255 4.255 2 C 0.263 3.737 3 O -0.299 6.299 4 C -0.224 4.224 5 C -0.010 4.010 6 C -0.109 4.109 7 C -0.045 4.045 8 N -0.116 5.116 9 C -0.024 4.024 10 C -0.234 4.234 11 C 0.187 3.813 12 O -0.161 6.161 13 C 0.120 3.880 14 H 0.070 0.930 15 C -0.563 4.563 16 H 0.117 0.883 17 C -0.122 4.122 18 N -0.505 5.505 19 Si 0.687 3.313 20 H -0.194 1.194 21 H -0.181 1.181 22 H -0.205 1.205 23 C -0.117 4.117 24 Cl -0.195 7.195 25 H 0.097 0.903 26 H 0.110 0.890 27 H 0.109 0.891 28 H 0.161 0.839 29 H 0.151 0.849 30 H 0.169 0.831 31 H 0.085 0.915 32 H 0.109 0.891 33 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges -9.369 -8.448 3.860 13.192 hybrid contribution 1.260 -0.496 0.573 1.470 sum -8.109 -8.944 4.433 12.860 Atomic orbital electron populations 1.22224 0.94370 1.04167 1.04753 1.22039 0.91023 0.87534 0.73061 1.90685 1.71461 1.33445 1.34350 1.19797 0.91198 0.95566 1.15827 1.21226 0.99588 0.89233 0.90975 1.15660 0.92447 0.86750 1.16064 1.25618 0.93246 0.92761 0.92843 1.81229 1.08732 1.10855 1.10762 1.21044 0.91656 0.98373 0.91319 1.21519 1.02219 0.91287 1.08373 1.19692 0.90922 0.86507 0.84190 1.86359 1.22027 1.25794 1.81891 1.21118 0.74975 1.01078 0.90803 0.92993 1.20773 0.92793 1.09786 1.32998 0.88332 1.24824 0.97395 0.95304 0.94677 1.69806 1.13904 1.28261 1.38491 0.87259 0.81815 0.82678 0.79572 1.19363 1.18141 1.20486 1.26309 1.01869 0.87808 0.95705 1.98669 1.92185 1.47848 1.80780 0.90344 0.88983 0.89113 0.83890 0.84852 0.83120 0.91506 0.89055 0.87680 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -1.85 10.19 36.01 0.37 -1.48 16 2 C 0.39 5.70 7.20 -30.83 -0.22 5.48 16 3 O -0.43 -8.38 15.91 -16.35 -0.26 -8.64 16 4 C -0.22 -3.20 5.88 -105.00 -0.62 -3.82 16 5 C 0.01 0.12 9.14 -38.69 -0.35 -0.24 16 6 C -0.11 -1.23 5.73 -106.93 -0.61 -1.84 16 7 C 0.27 3.32 15.32 -22.48 -0.34 2.98 16 8 N -0.44 -6.23 18.54 41.84 0.78 -5.45 16 9 C 0.00 -0.04 9.73 -39.12 -0.38 -0.42 16 10 C -0.22 -3.25 7.16 -39.55 -0.28 -3.53 16 11 C 0.24 4.10 6.24 -38.44 -0.24 3.86 16 12 O -0.25 -5.28 7.75 -40.03 -0.31 -5.59 16 13 C 0.18 3.77 1.74 -27.88 -0.05 3.72 16 14 H 0.05 1.08 4.53 -51.93 -0.24 0.84 16 15 C -0.53 -13.55 9.47 -34.44 -0.33 -13.88 16 16 H 0.10 2.88 8.06 -52.49 -0.42 2.46 16 17 C 0.08 2.16 5.45 -17.82 -0.10 2.06 16 18 N -0.87 -24.05 13.96 55.43 0.77 -23.28 16 19 Si 0.86 18.46 24.41 -169.99 -4.15 14.31 16 20 H -0.27 -5.53 6.83 56.52 0.39 -5.15 16 21 H -0.26 -5.12 6.53 56.52 0.37 -4.75 16 22 H -0.28 -6.03 7.11 56.52 0.40 -5.63 16 23 C -0.05 -1.06 5.83 37.16 0.22 -0.85 16 24 Cl -0.22 -3.75 25.65 -51.86 -1.33 -5.08 16 25 H 0.08 0.52 5.62 -51.93 -0.29 0.23 16 26 H 0.09 0.77 8.14 -51.93 -0.42 0.35 16 27 H 0.09 0.78 8.14 -51.93 -0.42 0.36 16 28 H 0.14 1.11 5.94 -52.49 -0.31 0.80 16 29 H 0.13 1.32 8.06 -52.49 -0.42 0.90 16 30 H 0.15 2.38 4.80 -52.49 -0.25 2.13 16 31 H 0.27 7.03 8.31 -40.82 -0.34 6.69 16 32 H 0.09 1.81 3.21 -51.93 -0.17 1.65 16 33 H 0.10 2.02 8.14 -51.93 -0.42 1.60 16 LS Contribution 298.70 15.07 4.50 4.50 Total: -1.00 -29.22 298.70 -5.50 -34.71 By element: Atomic # 1 Polarization: 5.03 SS G_CDS: -2.55 Total: 2.47 kcal Atomic # 6 Polarization: -5.02 SS G_CDS: -2.94 Total: -7.96 kcal Atomic # 7 Polarization: -30.29 SS G_CDS: 1.55 Total: -28.74 kcal Atomic # 8 Polarization: -13.65 SS G_CDS: -0.57 Total: -14.22 kcal Atomic # 14 Polarization: 18.46 SS G_CDS: -4.15 Total: 14.31 kcal Atomic # 17 Polarization: -3.75 SS G_CDS: -1.33 Total: -5.08 kcal Total LS contribution 4.50 Total: 4.50 kcal Total: -29.22 -5.50 -34.71 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001226975835.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.094 kcal (2) G-P(sol) polarization free energy of solvation -29.216 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.122 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.495 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.711 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.617 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds