Wall clock time and date at job start Tue Mar 31 2020 07:33:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17403 * 1 3 3 C 1.47194 * 179.97438 * 2 1 4 4 N 1.46502 * 109.47212 * 55.04674 * 3 2 1 5 5 C 1.36938 * 120.00264 * 263.92642 * 4 3 2 6 6 H 1.08003 * 119.99703 * 199.38596 * 5 4 3 7 7 C 1.38810 * 119.99962 * 19.39000 * 5 4 3 8 8 N 1.31615 * 120.00153 * 22.27753 * 7 5 4 9 9 Si 1.86804 * 119.99774 * 202.27827 * 7 5 4 10 10 H 1.48500 * 109.46898 * 60.00408 * 9 7 5 11 11 H 1.48508 * 109.46821 * 179.97438 * 9 7 5 12 12 H 1.48497 * 109.47216 * 299.99723 * 9 7 5 13 13 C 1.46502 * 119.99667 * 83.92955 * 4 3 2 14 14 C 1.53000 * 109.47495 * 90.00113 * 13 4 3 15 15 H 1.08997 * 109.47348 * 59.99628 * 14 13 4 16 16 O 1.42904 * 109.46719 * 300.00054 * 14 13 4 17 17 C 1.52992 * 109.47340 * 180.02562 * 14 13 4 18 18 C 1.50705 * 109.47179 * 184.99708 * 17 14 13 19 19 C 1.38261 * 119.98940 * 89.99956 * 18 17 14 20 20 C 1.38220 * 120.02286 * 179.72396 * 19 18 17 21 21 C 1.38237 * 120.01540 * 0.27754 * 20 19 18 22 22 C 1.38332 * 119.98516 * 359.97438 * 21 20 19 23 23 Cl 1.73604 * 120.01319 * 179.97438 * 22 21 20 24 24 C 1.38191 * 119.99393 * 270.27447 * 18 17 14 25 25 H 4.40642 * 5.51431 * 180.02562 * 4 1 2 26 26 H 1.08999 * 109.47201 * 295.05150 * 3 2 1 27 27 H 1.08999 * 109.47594 * 175.05000 * 3 2 1 28 28 H 0.97002 * 120.00415 * 179.97438 * 8 7 5 29 29 H 1.08997 * 109.47126 * 329.99604 * 13 4 3 30 30 H 1.09004 * 109.47134 * 210.00121 * 13 4 3 31 31 H 0.96699 * 113.99630 * 299.99690 * 16 14 13 32 32 H 1.09000 * 109.47454 * 65.00016 * 17 14 13 33 33 H 1.09000 * 109.47355 * 304.99571 * 17 14 13 34 34 H 1.07997 * 119.99156 * 0.02562 * 19 18 17 35 35 H 1.07999 * 119.99410 * 180.29531 * 20 19 18 36 36 H 1.08001 * 120.00838 * 179.97438 * 21 20 19 37 37 H 1.07999 * 120.00553 * 359.97438 * 24 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1347 -0.7904 -1.1321 5 6 3.4818 -2.1027 -0.9513 6 1 4.1205 -2.5961 -1.6691 7 6 3.0128 -2.7987 0.1543 8 7 1.9282 -2.3900 0.7778 9 14 3.9212 -4.3156 0.7572 10 1 5.3104 -3.9454 1.1292 11 1 3.2229 -4.8715 1.9442 12 1 3.9526 -5.3353 -0.3218 13 6 3.2521 -0.1775 -2.4575 14 6 4.6451 0.4354 -2.6146 15 1 5.3993 -0.3440 -2.5066 16 8 4.8429 1.4320 -1.6097 17 6 4.7674 1.0760 -3.9985 18 6 6.1764 1.5712 -4.2001 19 6 7.1290 0.7376 -4.7564 20 6 8.4200 1.1930 -4.9469 21 6 8.7611 2.4802 -4.5759 22 6 7.8098 3.3129 -4.0145 23 17 8.2374 4.9294 -3.5478 24 6 6.5175 2.8564 -3.8237 25 1 -1.0499 0.0000 -0.0003 26 1 3.0095 -0.4343 0.9310 27 1 3.0089 1.0246 -0.0887 28 1 1.6002 -2.8766 1.5502 29 1 2.4978 0.6019 -2.5655 30 1 3.1011 -0.9377 -3.2240 31 1 4.2058 2.1585 -1.6456 32 1 4.0738 1.9134 -4.0739 33 1 4.5292 0.3369 -4.7634 34 1 6.8630 -0.2680 -5.0467 35 1 9.1625 0.5430 -5.3858 36 1 9.7700 2.8358 -4.7244 37 1 5.7743 3.5060 -3.3854 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000286695551.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:33:33 Heat of formation + Delta-G solvation = 42.126339 kcal Electronic energy + Delta-G solvation = -20597.887068 eV Core-core repulsion = 17368.289339 eV Total energy + Delta-G solvation = -3229.597728 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 293.092 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -39.57806 -37.56083 -36.49849 -35.23363 -32.73272 -31.53010 -31.27139 -30.76350 -28.94835 -26.24588 -25.62654 -22.74338 -22.72060 -21.06891 -20.72453 -17.44763 -17.11900 -16.49399 -15.81018 -15.72052 -15.29806 -14.92516 -14.67739 -14.22431 -13.83190 -13.67040 -13.31948 -13.24694 -12.99858 -12.52025 -11.90728 -11.58894 -11.54637 -11.47270 -11.23410 -11.19081 -10.90031 -10.88192 -10.69539 -10.47236 -10.26106 -9.98657 -9.86068 -8.93128 -8.90920 -8.76032 -8.56239 -8.39093 -6.89992 -5.77005 -3.19148 1.12198 1.24399 2.06073 3.38325 3.45570 3.46998 3.58135 4.17093 4.39834 4.53927 4.64457 4.72490 4.88681 5.04241 5.18700 5.24429 5.34580 5.38517 5.39866 5.70155 5.71254 5.82204 5.87350 5.93133 6.02133 6.10060 6.17369 6.27359 6.47673 6.56811 6.72063 6.77895 6.81995 7.27459 7.45054 7.75029 8.16820 8.31416 9.11726 9.21479 9.79152 10.25960 11.25936 Molecular weight = 293.09amu Principal moments of inertia in cm(-1) A = 0.019401 B = 0.003753 C = 0.003428 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1442.843576 B = 7458.995314 C = 8165.300794 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.305 4.305 2 C -0.096 4.096 3 C 0.272 3.728 4 N -0.577 5.577 5 C -0.268 4.268 6 H 0.071 0.929 7 C 0.006 3.994 8 N -0.886 5.886 9 Si 0.897 3.103 10 H -0.283 1.283 11 H -0.291 1.291 12 H -0.284 1.284 13 C 0.121 3.879 14 C 0.092 3.908 15 H 0.097 0.903 16 O -0.548 6.548 17 C -0.117 4.117 18 C -0.050 4.050 19 C -0.115 4.115 20 C -0.107 4.107 21 C -0.123 4.123 22 C -0.032 4.032 23 Cl -0.079 7.079 24 C -0.097 4.097 25 H 0.189 0.811 26 H 0.089 0.911 27 H 0.043 0.957 28 H 0.254 0.746 29 H 0.040 0.960 30 H 0.056 0.944 31 H 0.360 0.640 32 H 0.074 0.926 33 H 0.083 0.917 34 H 0.128 0.872 35 H 0.129 0.871 36 H 0.128 0.872 37 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.303 10.973 -11.254 18.265 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.324 4.324 2 C -0.099 4.099 3 C 0.147 3.853 4 N -0.296 5.296 5 C -0.397 4.397 6 H 0.089 0.911 7 C -0.193 4.193 8 N -0.528 5.528 9 Si 0.727 3.273 10 H -0.210 1.210 11 H -0.217 1.217 12 H -0.210 1.210 13 C -0.007 4.007 14 C 0.030 3.970 15 H 0.115 0.885 16 O -0.352 6.352 17 C -0.156 4.156 18 C -0.051 4.051 19 C -0.133 4.133 20 C -0.126 4.126 21 C -0.142 4.142 22 C -0.059 4.059 23 Cl -0.051 7.051 24 C -0.115 4.115 25 H 0.206 0.794 26 H 0.107 0.893 27 H 0.061 0.939 28 H 0.065 0.935 29 H 0.058 0.942 30 H 0.074 0.926 31 H 0.205 0.795 32 H 0.093 0.907 33 H 0.102 0.898 34 H 0.146 0.854 35 H 0.146 0.854 36 H 0.146 0.854 37 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 9.767 10.604 -10.886 18.065 hybrid contribution -0.306 -0.573 0.248 0.696 sum 9.460 10.031 -10.638 17.415 Atomic orbital electron populations 1.24180 0.95342 1.07896 1.04976 1.24470 0.95469 0.93805 0.96151 1.17722 0.82268 0.92534 0.92814 1.43792 1.74633 1.08737 1.02410 1.19088 1.24550 0.87261 1.08777 0.91087 1.24898 0.96056 0.98025 1.00336 1.70121 1.19303 1.41159 1.22239 0.86452 0.79757 0.82792 0.78296 1.20994 1.21727 1.21026 1.21431 0.93226 0.96730 0.89321 1.22810 1.00905 0.89659 0.83585 0.88533 1.86649 1.57437 1.35888 1.55198 1.21470 0.92121 1.01486 1.00476 1.19816 0.96439 0.92784 0.96052 1.21195 0.93023 0.99883 0.99232 1.21057 0.96630 0.95061 0.99817 1.20972 0.98954 0.93968 1.00321 1.20898 0.95276 0.86759 1.02948 1.98359 1.93470 1.22189 1.91049 1.20891 0.94663 0.96200 0.99783 0.79381 0.89309 0.93904 0.93512 0.94181 0.92572 0.79468 0.90715 0.89849 0.85417 0.85351 0.85424 0.85156 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.30 -6.95 19.25 29.55 0.57 -6.38 16 2 C -0.10 -2.33 11.50 -37.13 -0.43 -2.75 16 3 C 0.27 6.39 5.20 -6.83 -0.04 6.35 16 4 N -0.58 -13.62 2.41 -176.57 -0.43 -14.05 16 5 C -0.27 -7.07 9.63 -15.06 -0.14 -7.21 16 6 H 0.07 1.83 7.92 -52.48 -0.42 1.41 16 7 C 0.01 0.18 4.82 -17.43 -0.08 0.09 16 8 N -0.89 -25.20 9.61 55.49 0.53 -24.66 16 9 Si 0.90 21.49 29.61 -169.99 -5.03 16.45 16 10 H -0.28 -6.78 7.11 56.52 0.40 -6.38 16 11 H -0.29 -7.08 7.11 56.52 0.40 -6.68 16 12 H -0.28 -6.72 7.11 56.52 0.40 -6.32 16 13 C 0.12 2.24 5.37 -4.04 -0.02 2.22 16 14 C 0.09 1.45 3.23 -26.74 -0.09 1.36 16 15 H 0.10 1.73 8.14 -51.93 -0.42 1.31 16 16 O -0.55 -8.89 11.45 -35.23 -0.40 -9.29 16 17 C -0.12 -1.40 5.03 -27.88 -0.14 -1.54 16 18 C -0.05 -0.61 4.97 -104.63 -0.52 -1.13 16 19 C -0.12 -1.31 9.70 -39.58 -0.38 -1.69 16 20 C -0.11 -1.11 10.05 -39.59 -0.40 -1.51 16 21 C -0.12 -1.33 9.83 -39.55 -0.39 -1.72 16 22 C -0.03 -0.38 6.32 -39.50 -0.25 -0.63 16 23 Cl -0.08 -0.88 28.96 -51.86 -1.50 -2.38 16 24 C -0.10 -1.17 9.17 -39.55 -0.36 -1.54 16 25 H 0.19 3.61 7.80 -54.10 -0.42 3.19 16 26 H 0.09 2.33 6.59 -51.93 -0.34 1.99 16 27 H 0.04 0.88 6.80 -51.93 -0.35 0.53 16 28 H 0.25 7.16 8.31 -40.82 -0.34 6.82 16 29 H 0.04 0.70 8.07 -51.93 -0.42 0.28 16 30 H 0.06 1.05 8.04 -51.93 -0.42 0.63 16 31 H 0.36 4.64 8.82 45.56 0.40 5.05 16 32 H 0.07 0.79 8.09 -51.93 -0.42 0.37 16 33 H 0.08 0.91 8.09 -51.93 -0.42 0.49 16 34 H 0.13 1.27 8.06 -52.49 -0.42 0.85 16 35 H 0.13 1.01 8.06 -52.49 -0.42 0.59 16 36 H 0.13 1.13 8.06 -52.49 -0.42 0.71 16 37 H 0.13 1.46 8.06 -52.49 -0.42 1.04 16 LS Contribution 336.31 15.07 5.07 5.07 Total: -1.00 -30.58 336.31 -8.49 -39.07 By element: Atomic # 1 Polarization: 9.94 SS G_CDS: -4.06 Total: 5.88 kcal Atomic # 6 Polarization: -13.41 SS G_CDS: -2.67 Total: -16.08 kcal Atomic # 7 Polarization: -38.82 SS G_CDS: 0.11 Total: -38.71 kcal Atomic # 8 Polarization: -8.89 SS G_CDS: -0.40 Total: -9.29 kcal Atomic # 14 Polarization: 21.49 SS G_CDS: -5.03 Total: 16.45 kcal Atomic # 17 Polarization: -0.88 SS G_CDS: -1.50 Total: -2.38 kcal Total LS contribution 5.07 Total: 5.07 kcal Total: -30.58 -8.49 -39.07 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000286695551.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.198 kcal (2) G-P(sol) polarization free energy of solvation -30.579 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.619 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.492 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.071 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.126 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds