Wall clock time and date at job start Tue Mar 31 2020 06:51:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.30999 * 1 3 3 C 1.50697 * 120.00193 * 2 1 4 4 N 1.46496 * 109.47602 * 125.33256 * 3 2 1 5 5 C 1.46494 * 119.99800 * 85.08728 * 4 3 2 6 6 C 1.50699 * 109.47059 * 90.00710 * 5 4 3 7 7 H 1.07996 * 120.00008 * 359.97438 * 6 5 4 8 8 C 1.37880 * 120.00154 * 179.97438 * 6 5 4 9 9 N 1.31511 * 120.00055 * 359.97438 * 8 6 5 10 10 Si 1.86796 * 119.99963 * 179.97438 * 8 6 5 11 11 H 1.48501 * 109.47417 * 0.02562 * 10 8 6 12 12 H 1.48504 * 109.47003 * 119.99905 * 10 8 6 13 13 H 1.48504 * 109.47208 * 240.00041 * 10 8 6 14 14 C 1.34777 * 119.99791 * 265.09315 * 4 3 2 15 15 O 1.21547 * 120.00363 * 4.58530 * 14 4 3 16 16 C 1.47855 * 119.99541 * 184.58327 * 14 4 3 17 17 C 1.39576 * 120.13841 * 302.00489 * 16 14 4 18 18 C 1.38065 * 119.83722 * 180.02562 * 17 16 14 19 19 Cl 1.73598 * 119.93747 * 180.02562 * 18 17 16 20 20 C 1.38488 * 120.11638 * 359.97438 * 18 17 16 21 21 C 1.38315 * 120.28173 * 0.02562 * 20 18 17 22 22 C 1.37983 * 120.15844 * 359.72117 * 21 20 18 23 23 C 1.50705 * 120.06060 * 180.29869 * 22 21 20 24 24 H 1.08001 * 120.00370 * 354.99767 * 1 2 3 25 25 H 1.08007 * 120.00237 * 174.99469 * 1 2 3 26 26 H 1.08004 * 119.99806 * 179.97438 * 2 1 3 27 27 H 1.09005 * 109.47056 * 5.32866 * 3 2 1 28 28 H 1.09004 * 109.46846 * 245.33581 * 3 2 1 29 29 H 1.09006 * 109.47042 * 210.00209 * 5 4 3 30 30 H 1.08998 * 109.47388 * 330.00310 * 5 4 3 31 31 H 0.96998 * 120.00215 * 180.02562 * 9 8 6 32 32 H 1.08000 * 120.08655 * 359.97438 * 17 16 14 33 33 H 1.08006 * 119.85440 * 180.02562 * 20 18 17 34 34 H 1.07997 * 119.91788 * 180.02562 * 21 20 18 35 35 H 1.09003 * 109.46567 * 274.99616 * 23 22 21 36 36 H 1.08996 * 109.47084 * 34.99800 * 23 22 21 37 37 H 1.08996 * 109.46648 * 155.00010 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0635 1.3050 0.0000 4 7 2.9995 1.3286 1.1267 5 6 4.3274 0.7256 0.9886 6 6 5.2997 1.7615 0.4860 7 1 4.9621 2.7682 0.2888 8 6 6.6202 1.4240 0.2779 9 7 7.0315 0.1983 0.5186 10 14 7.8252 2.7079 -0.3458 11 1 7.1177 3.9996 -0.5364 12 1 8.9176 2.8839 0.6447 13 1 8.3984 2.2611 -1.6408 14 6 2.6387 1.9050 2.2904 15 8 1.5093 2.3309 2.4333 16 6 3.6170 2.0193 3.3932 17 6 4.2245 0.8749 3.9124 18 6 5.1367 0.9887 4.9425 19 17 5.8944 -0.4327 5.5898 20 6 5.4491 2.2349 5.4596 21 6 4.8500 3.3721 4.9487 22 6 3.9406 3.2722 3.9157 23 6 3.2942 4.5133 3.3563 24 1 -0.5401 0.9317 0.0816 25 1 -0.5401 -0.9318 -0.0816 26 1 1.8500 -0.9354 0.0004 27 1 1.3590 2.1314 0.0954 28 1 2.6166 1.4052 -0.9340 29 1 4.6606 0.3547 1.9579 30 1 4.2790 -0.1013 0.2802 31 1 7.9606 -0.0391 0.3726 32 1 3.9811 -0.0973 3.5099 33 1 6.1636 2.3191 6.2651 34 1 5.0982 4.3410 5.3561 35 1 2.4232 4.7721 3.9584 36 1 4.0085 5.3363 3.3780 37 1 2.9833 4.3289 2.3280 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000292281648.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:51:34 Heat of formation + Delta-G solvation = 1.515598 kcal Electronic energy + Delta-G solvation = -21537.697464 eV Core-core repulsion = 18306.338721 eV Total energy + Delta-G solvation = -3231.358742 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 293.092 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -39.98503 -38.08513 -36.15501 -35.49476 -33.55472 -32.27658 -32.13696 -30.84273 -27.46720 -26.82809 -25.64614 -23.55797 -22.51801 -21.40971 -19.69946 -18.77794 -16.92105 -16.53357 -16.07358 -15.56460 -15.44180 -14.70292 -14.56054 -14.12615 -13.61574 -13.54843 -13.27784 -13.02877 -12.73195 -12.55235 -12.44425 -12.03486 -11.64656 -11.37189 -11.30515 -11.08597 -11.01407 -10.88086 -10.82284 -10.69673 -10.63812 -10.17440 -9.75168 -9.41832 -9.00564 -8.67584 -8.43838 -8.16235 -7.79113 -6.17328 -4.23249 1.36073 1.55079 2.43987 2.54489 3.21261 3.23551 3.30415 3.34229 3.77671 4.14082 4.33567 5.00255 5.10903 5.16905 5.17876 5.31146 5.39362 5.53176 5.56602 5.82063 5.90562 5.92508 5.97852 6.12380 6.14406 6.29130 6.34866 6.44034 6.49848 6.64130 6.79623 6.90227 7.04913 7.08982 7.15532 7.45067 7.75709 8.04950 8.21454 8.74536 8.88989 9.43246 10.89692 Molecular weight = 293.09amu Principal moments of inertia in cm(-1) A = 0.009248 B = 0.008189 C = 0.006052 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3026.933613 B = 3418.211392 C = 4625.167881 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 C -0.158 4.158 3 C 0.143 3.857 4 N -0.584 5.584 5 C 0.225 3.775 6 C -0.533 4.533 7 H 0.060 0.940 8 C 0.068 3.932 9 N -0.887 5.887 10 Si 0.892 3.108 11 H -0.272 1.272 12 H -0.282 1.282 13 H -0.283 1.283 14 C 0.562 3.438 15 O -0.561 6.561 16 C -0.085 4.085 17 C -0.059 4.059 18 C -0.040 4.040 19 Cl -0.076 7.076 20 C -0.098 4.098 21 C -0.118 4.118 22 C -0.036 4.036 23 C -0.112 4.112 24 H 0.096 0.904 25 H 0.092 0.908 26 H 0.108 0.892 27 H 0.079 0.921 28 H 0.089 0.911 29 H 0.050 0.950 30 H 0.037 0.963 31 H 0.264 0.736 32 H 0.137 0.863 33 H 0.130 0.870 34 H 0.131 0.869 35 H 0.074 0.926 36 H 0.066 0.934 37 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.846 2.312 6.152 8.165 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.227 4.227 2 C -0.177 4.177 3 C 0.020 3.980 4 N -0.313 5.313 5 C 0.105 3.895 6 C -0.571 4.571 7 H 0.078 0.922 8 C -0.135 4.135 9 N -0.525 5.525 10 Si 0.719 3.281 11 H -0.197 1.197 12 H -0.208 1.208 13 H -0.209 1.209 14 C 0.350 3.650 15 O -0.442 6.442 16 C -0.088 4.088 17 C -0.078 4.078 18 C -0.066 4.066 19 Cl -0.047 7.047 20 C -0.116 4.116 21 C -0.136 4.136 22 C -0.037 4.037 23 C -0.168 4.168 24 H 0.114 0.886 25 H 0.111 0.889 26 H 0.126 0.874 27 H 0.097 0.903 28 H 0.107 0.893 29 H 0.067 0.933 30 H 0.055 0.945 31 H 0.074 0.926 32 H 0.154 0.846 33 H 0.148 0.852 34 H 0.149 0.851 35 H 0.092 0.908 36 H 0.085 0.915 37 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -5.172 2.272 6.232 8.411 hybrid contribution 1.179 0.256 -0.428 1.280 sum -3.993 2.528 5.804 7.484 Atomic orbital electron populations 1.23757 0.95842 1.01484 1.01612 1.23394 0.96117 0.99367 0.98834 1.20499 0.92099 0.95085 0.90326 1.48210 1.17069 1.55320 1.10690 1.19771 0.76583 0.94040 0.99078 1.21420 0.93538 0.97002 1.45180 0.92204 1.24886 0.98089 0.95389 0.95178 1.69915 1.16826 1.17785 1.47947 0.86530 0.81154 0.81792 0.78579 1.19680 1.20807 1.20880 1.18135 0.86516 0.77649 0.82689 1.90695 1.20576 1.50789 1.82115 1.19585 0.98555 0.93246 0.97387 1.21008 0.94142 0.98947 0.93747 1.20619 0.99224 0.88015 0.98744 1.98345 1.81125 1.39700 1.85561 1.21005 0.99808 0.90644 1.00183 1.20778 0.97598 0.98135 0.97105 1.19839 0.95317 0.94067 0.94499 1.20785 1.00028 0.94169 1.01823 0.88571 0.88935 0.87382 0.90289 0.89319 0.93258 0.94469 0.92611 0.84570 0.85207 0.85093 0.90766 0.91503 0.91173 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.19 -2.71 14.32 29.01 0.42 -2.29 16 2 C -0.16 -2.57 9.84 -36.03 -0.35 -2.92 16 3 C 0.14 2.60 5.87 -5.20 -0.03 2.57 16 4 N -0.58 -12.20 2.44 -177.55 -0.43 -12.63 16 5 C 0.22 5.26 4.93 -5.20 -0.03 5.23 16 6 C -0.53 -13.70 9.39 -34.44 -0.32 -14.02 16 7 H 0.06 1.57 7.81 -52.49 -0.41 1.16 16 8 C 0.07 1.79 5.46 -17.82 -0.10 1.69 16 9 N -0.89 -24.25 13.29 55.43 0.74 -23.52 16 10 Si 0.89 20.60 29.54 -169.99 -5.02 15.58 16 11 H -0.27 -6.23 7.11 56.52 0.40 -5.83 16 12 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 13 H -0.28 -6.49 7.11 56.52 0.40 -6.09 16 14 C 0.56 11.82 5.92 -12.32 -0.07 11.75 16 15 O -0.56 -12.39 15.81 5.32 0.08 -12.31 16 16 C -0.08 -1.67 5.02 -104.97 -0.53 -2.20 16 17 C -0.06 -1.13 7.45 -39.15 -0.29 -1.42 16 18 C -0.04 -0.69 6.31 -39.55 -0.25 -0.94 16 19 Cl -0.08 -1.22 28.95 -51.86 -1.50 -2.72 16 20 C -0.10 -1.50 9.82 -39.46 -0.39 -1.89 16 21 C -0.12 -1.79 9.71 -39.65 -0.38 -2.17 16 22 C -0.04 -0.64 5.91 -104.22 -0.62 -1.25 16 23 C -0.11 -1.75 9.34 36.01 0.34 -1.42 16 24 H 0.10 1.36 7.84 -52.49 -0.41 0.95 16 25 H 0.09 1.14 8.06 -52.48 -0.42 0.72 16 26 H 0.11 1.74 8.06 -52.48 -0.42 1.32 16 27 H 0.08 1.42 7.00 -51.93 -0.36 1.06 16 28 H 0.09 1.59 8.11 -51.93 -0.42 1.17 16 29 H 0.05 1.19 4.17 -51.93 -0.22 0.98 16 30 H 0.04 0.91 8.07 -51.93 -0.42 0.49 16 31 H 0.26 6.92 8.31 -40.82 -0.34 6.58 16 32 H 0.14 2.60 7.06 -52.49 -0.37 2.23 16 33 H 0.13 1.64 8.06 -52.48 -0.42 1.21 16 34 H 0.13 1.55 8.06 -52.49 -0.42 1.12 16 35 H 0.07 1.06 8.14 -51.93 -0.42 0.64 16 36 H 0.07 0.89 8.12 -51.93 -0.42 0.47 16 37 H 0.07 1.25 6.68 -51.93 -0.35 0.90 16 LS Contribution 334.19 15.07 5.04 5.04 Total: -1.00 -28.56 334.19 -8.34 -36.90 By element: Atomic # 1 Polarization: 7.58 SS G_CDS: -4.63 Total: 2.95 kcal Atomic # 6 Polarization: -6.68 SS G_CDS: -2.61 Total: -9.29 kcal Atomic # 7 Polarization: -36.45 SS G_CDS: 0.30 Total: -36.15 kcal Atomic # 8 Polarization: -12.39 SS G_CDS: 0.08 Total: -12.31 kcal Atomic # 14 Polarization: 20.60 SS G_CDS: -5.02 Total: 15.58 kcal Atomic # 17 Polarization: -1.22 SS G_CDS: -1.50 Total: -2.72 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -28.56 -8.34 -36.90 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000292281648.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.418 kcal (2) G-P(sol) polarization free energy of solvation -28.564 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.854 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.338 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.903 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.516 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds