Wall clock time and date at job start Tue Mar 31 2020 06:47:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31000 * 1 3 3 C 1.50701 * 119.99774 * 2 1 4 4 N 1.46495 * 109.47536 * 125.00330 * 3 2 1 5 5 C 1.46506 * 120.00035 * 264.82656 * 4 3 2 6 6 C 1.50707 * 109.46935 * 273.83864 * 5 4 3 7 7 H 1.08002 * 119.99590 * 359.97438 * 6 5 4 8 8 C 1.37870 * 119.99887 * 180.02562 * 6 5 4 9 9 N 1.31513 * 120.00392 * 359.97438 * 8 6 5 10 10 Si 1.86803 * 119.99908 * 179.97438 * 8 6 5 11 11 H 1.48495 * 109.47285 * 89.99909 * 10 8 6 12 12 H 1.48504 * 109.47037 * 209.99756 * 10 8 6 13 13 H 1.48498 * 109.46822 * 329.99532 * 10 8 6 14 14 C 1.34772 * 120.00208 * 84.82012 * 4 3 2 15 15 O 1.21554 * 120.00156 * 3.45365 * 14 4 3 16 16 C 1.47858 * 119.99889 * 183.45022 * 14 4 3 17 17 C 1.39597 * 120.13515 * 129.57390 * 16 14 4 18 18 C 1.37946 * 119.87802 * 180.02562 * 17 16 14 19 19 C 1.50702 * 119.91628 * 179.97438 * 18 17 16 20 20 C 1.38352 * 120.15931 * 0.02979 * 18 17 16 21 21 C 1.38448 * 120.28211 * 359.94741 * 20 18 17 22 22 Cl 1.73600 * 119.94176 * 180.02562 * 21 20 18 23 23 C 1.38100 * 120.11585 * 0.05140 * 21 20 18 24 24 H 1.07999 * 119.99514 * 180.02562 * 1 2 3 25 25 H 1.08002 * 120.00283 * 359.97438 * 1 2 3 26 26 H 1.07994 * 120.00614 * 180.02562 * 2 1 3 27 27 H 1.09007 * 109.47415 * 4.99981 * 3 2 1 28 28 H 1.09009 * 109.47322 * 245.00257 * 3 2 1 29 29 H 1.09001 * 109.47072 * 33.83469 * 5 4 3 30 30 H 1.08995 * 109.47639 * 153.83793 * 5 4 3 31 31 H 0.96997 * 120.00635 * 180.02562 * 9 8 6 32 32 H 1.07999 * 120.05879 * 0.02562 * 17 16 14 33 33 H 1.09001 * 109.46700 * 90.00866 * 19 18 17 34 34 H 1.09007 * 109.46661 * 210.00488 * 19 18 17 35 35 H 1.08991 * 109.47249 * 330.00323 * 19 18 17 36 36 H 1.08003 * 119.86125 * 179.97438 * 20 18 17 37 37 H 1.07998 * 120.08057 * 180.25354 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0635 1.3051 0.0000 4 7 2.9938 1.3320 1.1313 5 6 2.5976 1.9673 2.3906 6 6 2.8995 3.4424 2.3258 7 1 3.3426 3.8643 1.4358 8 6 2.6110 4.2530 3.4031 9 7 2.0719 3.7392 4.4870 10 14 2.9859 6.0813 3.3231 11 1 1.8082 6.8048 2.7801 12 1 3.2902 6.5843 4.6868 13 1 4.1572 6.3081 2.4389 14 6 4.2141 0.7723 1.0138 15 8 4.5666 0.3008 -0.0497 16 6 5.1241 0.7317 2.1784 17 6 5.7322 -0.4683 2.5512 18 6 6.5799 -0.5002 3.6390 19 6 7.2364 -1.7953 4.0425 20 6 6.8279 0.6536 4.3610 21 6 6.2288 1.8474 3.9969 22 17 6.5467 3.2900 4.9087 23 6 5.3782 1.8925 2.9098 24 1 -0.5399 -0.9353 0.0004 25 1 -0.5401 0.9353 0.0004 26 1 1.8501 -0.9352 -0.0004 27 1 1.3585 2.1317 0.0896 28 1 2.6213 1.4027 -0.9315 29 1 1.5292 1.8218 2.5506 30 1 3.1527 1.5187 3.2144 31 1 1.8686 4.3095 5.2448 32 1 5.5393 -1.3700 1.9890 33 1 8.1909 -1.8952 3.5257 34 1 7.4044 -1.7973 5.1196 35 1 6.5888 -2.6299 3.7743 36 1 7.4921 0.6230 5.2121 37 1 4.9143 2.8249 2.6238 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000292468962.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:47:19 Heat of formation + Delta-G solvation = -2.898689 kcal Electronic energy + Delta-G solvation = -21329.715210 eV Core-core repulsion = 18098.165050 eV Total energy + Delta-G solvation = -3231.550160 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 293.092 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -39.86338 -38.17491 -36.01331 -35.51042 -33.75311 -32.46107 -32.03504 -30.50444 -27.72187 -26.67504 -25.90672 -23.39295 -22.44768 -21.43893 -19.83511 -18.54968 -16.74181 -16.50103 -16.08357 -15.69851 -15.20830 -14.83422 -14.51834 -14.22048 -14.03146 -13.68653 -12.98580 -12.83749 -12.65275 -12.44315 -12.32128 -12.21833 -11.71477 -11.43534 -11.39484 -11.07516 -10.94750 -10.92651 -10.89885 -10.66029 -10.50776 -10.22315 -9.82290 -9.34768 -9.01154 -8.64748 -8.41820 -8.19436 -7.83539 -6.24209 -4.32232 1.32558 1.62090 2.52637 2.57424 3.20082 3.26828 3.28680 3.33380 3.86271 4.10332 4.30108 4.98094 5.01943 5.08548 5.31799 5.32616 5.44022 5.51441 5.56481 5.65197 5.76509 5.89918 5.95403 6.04910 6.14693 6.25582 6.31094 6.61224 6.66414 6.69043 6.84379 6.89699 7.02197 7.15765 7.18961 7.47138 7.68882 7.97611 8.21892 8.69639 8.87641 9.34651 10.81604 Molecular weight = 293.09amu Principal moments of inertia in cm(-1) A = 0.009744 B = 0.008932 C = 0.005140 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2872.843887 B = 3134.209307 C = 5446.194755 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.156 4.156 3 C 0.144 3.856 4 N -0.583 5.583 5 C 0.232 3.768 6 C -0.548 4.548 7 H 0.064 0.936 8 C 0.077 3.923 9 N -0.876 5.876 10 Si 0.886 3.114 11 H -0.278 1.278 12 H -0.283 1.283 13 H -0.269 1.269 14 C 0.559 3.441 15 O -0.565 6.565 16 C -0.105 4.105 17 C -0.075 4.075 18 C -0.098 4.098 19 C -0.106 4.106 20 C -0.100 4.100 21 C -0.037 4.037 22 Cl -0.072 7.072 23 C -0.062 4.062 24 H 0.093 0.907 25 H 0.098 0.902 26 H 0.104 0.896 27 H 0.088 0.912 28 H 0.080 0.920 29 H 0.036 0.964 30 H 0.045 0.955 31 H 0.267 0.733 32 H 0.127 0.873 33 H 0.069 0.931 34 H 0.065 0.935 35 H 0.066 0.934 36 H 0.128 0.872 37 H 0.178 0.822 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.020 -6.844 -0.256 8.491 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C -0.175 4.175 3 C 0.022 3.978 4 N -0.312 5.312 5 C 0.113 3.887 6 C -0.586 4.586 7 H 0.082 0.918 8 C -0.129 4.129 9 N -0.513 5.513 10 Si 0.713 3.287 11 H -0.204 1.204 12 H -0.208 1.208 13 H -0.194 1.194 14 C 0.347 3.653 15 O -0.447 6.447 16 C -0.108 4.108 17 C -0.094 4.094 18 C -0.098 4.098 19 C -0.163 4.163 20 C -0.119 4.119 21 C -0.063 4.063 22 Cl -0.043 7.043 23 C -0.080 4.080 24 H 0.111 0.889 25 H 0.116 0.884 26 H 0.122 0.878 27 H 0.106 0.894 28 H 0.098 0.902 29 H 0.054 0.946 30 H 0.063 0.937 31 H 0.077 0.923 32 H 0.145 0.855 33 H 0.087 0.913 34 H 0.084 0.916 35 H 0.085 0.915 36 H 0.146 0.854 37 H 0.195 0.805 Dipole moment (debyes) X Y Z Total from point charges 5.128 -6.884 -0.511 8.600 hybrid contribution 0.013 1.231 0.354 1.280 sum 5.141 -5.654 -0.157 7.643 Atomic orbital electron populations 1.23773 0.95745 1.01588 1.01819 1.23372 0.96077 0.99299 0.98747 1.20442 0.92152 0.94946 0.90300 1.48183 1.12924 1.54258 1.15813 1.19620 0.97039 0.92471 0.79589 1.21402 1.43137 0.92656 1.01427 0.91822 1.24868 0.94327 0.98645 0.95014 1.69905 1.40879 1.36027 1.04480 0.86660 0.79088 0.85124 0.77830 1.20414 1.20800 1.19387 1.18237 0.81767 0.77949 0.87318 1.90692 1.76039 1.49298 1.28622 1.19802 0.99713 0.94197 0.97132 1.21010 0.95417 0.97154 0.95832 1.19594 0.98901 0.95250 0.96074 1.20715 1.00264 0.93788 1.01548 1.20963 0.99983 0.90810 1.00156 1.20751 1.01220 0.88093 0.96274 1.98353 1.94618 1.37729 1.73596 1.22310 0.92946 1.01489 0.91285 0.88884 0.88393 0.87806 0.89402 0.90188 0.94560 0.93748 0.92327 0.85535 0.91271 0.91560 0.91473 0.85417 0.80501 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.19 -2.72 14.32 29.01 0.42 -2.31 16 2 C -0.16 -2.55 9.80 -36.03 -0.35 -2.90 16 3 C 0.14 2.66 5.84 -5.20 -0.03 2.63 16 4 N -0.58 -12.27 2.45 -177.54 -0.44 -12.71 16 5 C 0.23 5.41 4.65 -5.19 -0.02 5.39 16 6 C -0.55 -13.56 6.63 -34.44 -0.23 -13.79 16 7 H 0.06 1.60 7.81 -52.49 -0.41 1.19 16 8 C 0.08 1.95 5.46 -17.82 -0.10 1.85 16 9 N -0.88 -23.26 13.29 55.43 0.74 -22.52 16 10 Si 0.89 20.10 29.54 -169.99 -5.02 15.07 16 11 H -0.28 -6.27 7.11 56.52 0.40 -5.87 16 12 H -0.28 -6.43 7.11 56.52 0.40 -6.02 16 13 H -0.27 -6.07 7.11 56.52 0.40 -5.67 16 14 C 0.56 11.96 7.18 -12.33 -0.09 11.87 16 15 O -0.57 -12.88 16.69 5.32 0.09 -12.79 16 16 C -0.11 -2.09 4.82 -104.97 -0.51 -2.60 16 17 C -0.08 -1.27 9.38 -39.18 -0.37 -1.64 16 18 C -0.10 -1.44 5.87 -104.69 -0.61 -2.06 16 19 C -0.11 -1.14 10.01 36.01 0.36 -0.78 16 20 C -0.10 -1.55 9.47 -39.46 -0.37 -1.93 16 21 C -0.04 -0.67 6.31 -39.55 -0.25 -0.92 16 22 Cl -0.07 -1.29 28.95 -51.86 -1.50 -2.79 16 23 C -0.06 -1.26 7.41 -39.15 -0.29 -1.55 16 24 H 0.09 1.14 8.06 -52.49 -0.42 0.72 16 25 H 0.10 1.34 7.84 -52.49 -0.41 0.93 16 26 H 0.10 1.73 8.06 -52.49 -0.42 1.30 16 27 H 0.09 1.58 7.68 -51.93 -0.40 1.18 16 28 H 0.08 1.47 7.54 -51.92 -0.39 1.08 16 29 H 0.04 0.90 8.10 -51.93 -0.42 0.48 16 30 H 0.04 1.10 5.74 -51.93 -0.30 0.80 16 31 H 0.27 6.82 8.31 -40.82 -0.34 6.48 16 32 H 0.13 1.97 8.06 -52.49 -0.42 1.54 16 33 H 0.07 0.66 8.14 -51.93 -0.42 0.23 16 34 H 0.07 0.62 8.08 -51.93 -0.42 0.20 16 35 H 0.07 0.66 8.08 -51.93 -0.42 0.24 16 36 H 0.13 1.65 8.06 -52.48 -0.42 1.22 16 37 H 0.18 4.04 4.85 -52.49 -0.25 3.78 16 LS Contribution 333.81 15.07 5.03 5.03 Total: -1.00 -27.42 333.81 -8.22 -35.64 By element: Atomic # 1 Polarization: 8.48 SS G_CDS: -4.67 Total: 3.81 kcal Atomic # 6 Polarization: -6.30 SS G_CDS: -2.45 Total: -8.74 kcal Atomic # 7 Polarization: -35.53 SS G_CDS: 0.30 Total: -35.23 kcal Atomic # 8 Polarization: -12.88 SS G_CDS: 0.09 Total: -12.79 kcal Atomic # 14 Polarization: 20.10 SS G_CDS: -5.02 Total: 15.07 kcal Atomic # 17 Polarization: -1.29 SS G_CDS: -1.50 Total: -2.79 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -27.42 -8.22 -35.64 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000292468962.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.742 kcal (2) G-P(sol) polarization free energy of solvation -27.417 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.325 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.224 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.641 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.899 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds