Wall clock time and date at job start Tue Mar 31 2020 06:51:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31001 * 1 3 3 C 1.50708 * 119.99949 * 2 1 4 4 N 1.46498 * 109.46872 * 125.00078 * 3 2 1 5 5 C 1.46494 * 120.00241 * 264.88940 * 4 3 2 6 6 C 1.50698 * 109.47569 * 270.00324 * 5 4 3 7 7 H 1.08007 * 119.99783 * 0.02562 * 6 5 4 8 8 C 1.37871 * 120.00417 * 179.97438 * 6 5 4 9 9 N 1.31519 * 120.00115 * 359.97438 * 8 6 5 10 10 Si 1.86801 * 120.00116 * 180.02562 * 8 6 5 11 11 H 1.48498 * 109.47064 * 90.00345 * 10 8 6 12 12 H 1.48501 * 109.47161 * 209.99979 * 10 8 6 13 13 H 1.48495 * 109.47374 * 330.00129 * 10 8 6 14 14 C 1.34779 * 119.99744 * 84.89493 * 4 3 2 15 15 O 1.21564 * 119.99776 * 185.53017 * 14 4 3 16 16 C 1.47783 * 120.00274 * 5.53054 * 14 4 3 17 17 C 1.39638 * 120.13112 * 55.21129 * 16 14 4 18 18 C 1.37872 * 119.86485 * 180.25609 * 17 16 14 19 19 C 1.38527 * 120.13132 * 0.02562 * 18 17 16 20 20 Cl 1.73599 * 119.86486 * 180.02562 * 19 18 17 21 21 C 1.38493 * 120.26903 * 0.02562 * 19 18 17 22 22 C 1.37910 * 120.12699 * 359.97438 * 21 19 18 23 23 C 1.50710 * 120.06484 * 180.02562 * 22 21 19 24 24 H 1.08006 * 119.99808 * 359.97438 * 1 2 3 25 25 H 1.07997 * 120.00028 * 180.02562 * 1 2 3 26 26 H 1.07999 * 120.00331 * 180.02562 * 2 1 3 27 27 H 1.09005 * 109.46865 * 5.00124 * 3 2 1 28 28 H 1.08994 * 109.46788 * 245.00508 * 3 2 1 29 29 H 1.09011 * 109.47343 * 30.00627 * 5 4 3 30 30 H 1.08999 * 109.47471 * 149.99961 * 5 4 3 31 31 H 0.97001 * 120.00251 * 179.97438 * 9 8 6 32 32 H 1.07999 * 120.06601 * 0.25661 * 17 16 14 33 33 H 1.07997 * 119.93135 * 180.02562 * 18 17 16 34 34 H 1.07998 * 119.93479 * 180.02562 * 21 19 18 35 35 H 1.09003 * 109.46899 * 274.94366 * 23 22 21 36 36 H 1.09004 * 109.46815 * 34.93718 * 23 22 21 37 37 H 1.08999 * 109.47173 * 154.93964 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0635 1.3052 0.0000 4 7 2.9938 1.3319 1.1314 5 6 2.5971 1.9659 2.3911 6 6 2.9835 3.4222 2.3642 7 1 3.4751 3.8345 1.4953 8 6 2.7086 4.2286 3.4481 9 7 2.1087 3.7270 4.5056 10 14 3.1871 6.0340 3.4144 11 1 2.0683 6.8321 2.8518 12 1 3.4782 6.4949 4.7957 13 1 4.3950 6.2103 2.5689 14 6 4.2147 0.7733 1.0133 15 8 4.9482 0.7057 1.9803 16 6 4.6616 0.2430 -0.2917 17 6 4.6563 1.0642 -1.4210 18 6 5.0693 0.5622 -2.6369 19 6 5.4885 -0.7541 -2.7395 20 17 6.0079 -1.3789 -4.2737 21 6 5.4950 -1.5738 -1.6232 22 6 5.0841 -1.0829 -0.4016 23 6 5.0923 -1.9759 0.8124 24 1 -0.5400 0.9354 0.0004 25 1 -0.5400 -0.9353 0.0004 26 1 1.8501 -0.9353 -0.0004 27 1 1.3585 2.1317 0.0896 28 1 2.6212 1.4027 -0.9314 29 1 1.5179 1.8786 2.5178 30 1 3.1014 1.4715 3.2213 31 1 1.9156 4.2943 5.2684 32 1 4.3293 2.0904 -1.3422 33 1 5.0661 1.1965 -3.5109 34 1 5.8233 -2.5991 -1.7093 35 1 4.1649 -2.5477 0.8491 36 1 5.9388 -2.6602 0.7544 37 1 5.1790 -1.3660 1.7115 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000292588031.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:51:37 Heat of formation + Delta-G solvation = 2.502882 kcal Electronic energy + Delta-G solvation = -21107.923125 eV Core-core repulsion = 17876.607195 eV Total energy + Delta-G solvation = -3231.315930 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 293.092 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -40.22300 -38.21641 -36.54576 -35.78065 -33.27829 -32.77173 -32.13479 -31.00347 -27.76618 -26.98977 -25.58769 -23.85901 -22.55264 -21.49591 -20.01384 -18.86570 -16.96892 -16.62719 -16.34666 -15.87044 -15.60260 -14.88998 -14.49538 -14.14950 -13.92561 -13.84883 -13.36053 -13.10855 -12.88421 -12.81139 -12.38476 -12.08448 -11.86127 -11.73507 -11.50486 -11.38258 -11.14865 -11.07655 -10.94050 -10.87201 -10.63652 -10.23746 -9.69201 -9.25133 -9.13031 -8.88385 -8.62755 -8.46740 -7.76127 -6.08721 -4.14252 0.87782 1.19049 1.96808 2.43080 3.13269 3.27351 3.34580 3.38594 3.62506 3.91358 4.40677 4.67617 4.72504 4.87710 5.07520 5.18715 5.25733 5.30811 5.39057 5.42617 5.62790 5.67444 5.73412 5.78449 5.99419 6.07152 6.07833 6.14689 6.24246 6.50172 6.66253 6.78134 6.88609 7.03153 7.38759 7.46596 7.87029 8.16911 8.28361 8.80052 8.96072 9.51103 10.99295 Molecular weight = 293.09amu Principal moments of inertia in cm(-1) A = 0.018848 B = 0.004323 C = 0.004141 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1485.181588 B = 6475.276376 C = 6760.754637 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C -0.164 4.164 3 C 0.127 3.873 4 N -0.583 5.583 5 C 0.246 3.754 6 C -0.530 4.530 7 H 0.058 0.942 8 C 0.063 3.937 9 N -0.893 5.893 10 Si 0.898 3.102 11 H -0.280 1.280 12 H -0.285 1.285 13 H -0.274 1.274 14 C 0.552 3.448 15 O -0.529 6.529 16 C -0.106 4.106 17 C -0.075 4.075 18 C -0.121 4.121 19 C -0.022 4.022 20 Cl -0.076 7.076 21 C -0.118 4.118 22 C -0.030 4.030 23 C -0.134 4.134 24 H 0.099 0.901 25 H 0.094 0.906 26 H 0.102 0.898 27 H 0.090 0.910 28 H 0.080 0.920 29 H 0.035 0.965 30 H 0.046 0.954 31 H 0.264 0.736 32 H 0.141 0.859 33 H 0.136 0.864 34 H 0.135 0.865 35 H 0.072 0.928 36 H 0.070 0.930 37 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.793 -10.254 -15.198 18.421 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.221 4.221 2 C -0.184 4.184 3 C 0.004 3.996 4 N -0.313 5.313 5 C 0.127 3.873 6 C -0.569 4.569 7 H 0.076 0.924 8 C -0.139 4.139 9 N -0.531 5.531 10 Si 0.725 3.275 11 H -0.206 1.206 12 H -0.210 1.210 13 H -0.199 1.199 14 C 0.338 3.662 15 O -0.407 6.407 16 C -0.109 4.109 17 C -0.094 4.094 18 C -0.140 4.140 19 C -0.048 4.048 20 Cl -0.047 7.047 21 C -0.136 4.136 22 C -0.031 4.031 23 C -0.190 4.190 24 H 0.117 0.883 25 H 0.112 0.888 26 H 0.121 0.879 27 H 0.108 0.892 28 H 0.098 0.902 29 H 0.053 0.947 30 H 0.064 0.936 31 H 0.074 0.926 32 H 0.159 0.841 33 H 0.154 0.846 34 H 0.153 0.847 35 H 0.091 0.909 36 H 0.089 0.911 37 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 2.141 -10.263 -14.591 17.967 hybrid contribution 0.199 0.976 -0.224 1.021 sum 2.340 -9.288 -14.816 17.642 Atomic orbital electron populations 1.23804 0.95768 1.01751 1.00809 1.23386 0.96336 0.98950 0.99681 1.20802 0.93079 0.95514 0.90222 1.48196 1.12662 1.54763 1.15676 1.19352 0.95963 0.92261 0.79696 1.21416 1.39394 0.93994 1.02085 0.92406 1.24922 0.94983 0.98912 0.95123 1.69933 1.41461 1.36148 1.05585 0.86501 0.78853 0.84662 0.77446 1.20598 1.21045 1.19860 1.18069 0.82472 0.78506 0.87172 1.90747 1.53858 1.57242 1.38858 1.20253 1.01447 0.94397 0.94828 1.21262 0.97206 1.00197 0.90726 1.20925 1.00736 0.93763 0.98541 1.21006 1.02407 0.94533 0.86878 1.98361 1.89249 1.87373 1.29727 1.20824 1.02102 1.00064 0.90643 1.19841 0.95201 0.93153 0.94952 1.21074 1.02179 0.99104 0.96637 0.88270 0.88776 0.87946 0.89180 0.90225 0.94750 0.93584 0.92643 0.84141 0.84610 0.84705 0.90942 0.91134 0.88584 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.37 14.32 29.01 0.42 -1.96 16 2 C -0.16 -2.37 9.81 -36.02 -0.35 -2.73 16 3 C 0.13 2.07 5.62 -5.19 -0.03 2.04 16 4 N -0.58 -12.05 2.45 -177.57 -0.44 -12.49 16 5 C 0.25 6.28 5.18 -5.20 -0.03 6.25 16 6 C -0.53 -14.61 9.39 -34.44 -0.32 -14.94 16 7 H 0.06 1.58 7.81 -52.48 -0.41 1.17 16 8 C 0.06 1.76 5.46 -17.82 -0.10 1.67 16 9 N -0.89 -26.07 13.29 55.43 0.74 -25.33 16 10 Si 0.90 21.43 29.54 -169.99 -5.02 16.41 16 11 H -0.28 -6.48 7.11 56.52 0.40 -6.08 16 12 H -0.28 -6.77 7.11 56.52 0.40 -6.37 16 13 H -0.27 -6.51 7.11 56.52 0.40 -6.11 16 14 C 0.55 11.36 6.43 -12.36 -0.08 11.28 16 15 O -0.53 -12.99 14.70 5.31 0.08 -12.92 16 16 C -0.11 -1.71 4.96 -104.97 -0.52 -2.23 16 17 C -0.08 -1.04 7.60 -39.19 -0.30 -1.34 16 18 C -0.12 -1.42 9.81 -39.61 -0.39 -1.81 16 19 C -0.02 -0.25 6.33 -39.38 -0.25 -0.50 16 20 Cl -0.08 -0.79 28.95 -51.86 -1.50 -2.29 16 21 C -0.12 -1.41 9.49 -39.61 -0.38 -1.79 16 22 C -0.03 -0.43 5.91 -104.23 -0.62 -1.05 16 23 C -0.13 -1.79 9.69 36.01 0.35 -1.44 16 24 H 0.10 1.25 7.84 -52.48 -0.41 0.83 16 25 H 0.09 1.05 8.06 -52.49 -0.42 0.63 16 26 H 0.10 1.45 8.06 -52.49 -0.42 1.02 16 27 H 0.09 1.49 7.68 -51.93 -0.40 1.09 16 28 H 0.08 1.13 4.55 -51.93 -0.24 0.89 16 29 H 0.03 0.90 8.07 -51.92 -0.42 0.48 16 30 H 0.05 1.33 7.35 -51.93 -0.38 0.95 16 31 H 0.26 7.28 8.31 -40.82 -0.34 6.94 16 32 H 0.14 1.87 7.39 -52.49 -0.39 1.48 16 33 H 0.14 1.29 8.06 -52.49 -0.42 0.87 16 34 H 0.14 1.32 8.06 -52.49 -0.42 0.90 16 35 H 0.07 0.86 8.14 -51.93 -0.42 0.44 16 36 H 0.07 0.78 8.12 -51.93 -0.42 0.35 16 37 H 0.10 1.61 5.58 -51.93 -0.29 1.32 16 LS Contribution 333.30 15.07 5.02 5.02 Total: -1.00 -31.01 333.30 -8.32 -39.33 By element: Atomic # 1 Polarization: 5.41 SS G_CDS: -4.61 Total: 0.80 kcal Atomic # 6 Polarization: -5.95 SS G_CDS: -2.59 Total: -8.54 kcal Atomic # 7 Polarization: -38.12 SS G_CDS: 0.30 Total: -37.82 kcal Atomic # 8 Polarization: -12.99 SS G_CDS: 0.08 Total: -12.92 kcal Atomic # 14 Polarization: 21.43 SS G_CDS: -5.02 Total: 16.41 kcal Atomic # 17 Polarization: -0.79 SS G_CDS: -1.50 Total: -2.29 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -31.01 -8.32 -39.33 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000292588031.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.829 kcal (2) G-P(sol) polarization free energy of solvation -31.007 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.822 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.319 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.326 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.503 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds