Wall clock time and date at job start Tue Mar 31 2020 06:38:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53775 * 113.61495 * 2 1 4 4 C 1.53779 * 87.08308 * 139.98001 * 3 2 1 5 5 C 1.50710 * 113.61167 * 89.11244 * 4 3 2 6 6 O 1.21288 * 120.00121 * 244.27198 * 5 4 3 7 7 N 1.34779 * 119.99599 * 64.27298 * 5 4 3 8 8 C 1.37089 * 119.99548 * 174.97180 * 7 5 4 9 9 H 1.07995 * 120.00764 * 359.97438 * 8 7 5 10 10 C 1.38961 * 119.99761 * 179.72487 * 8 7 5 11 11 N 1.31408 * 120.00068 * 0.27187 * 10 8 7 12 12 Si 1.86802 * 119.99737 * 180.27388 * 10 8 7 13 13 H 1.48497 * 109.47251 * 59.99972 * 12 10 8 14 14 H 1.48505 * 109.46745 * 179.97438 * 12 10 8 15 15 H 1.48494 * 109.47374 * 299.99363 * 12 10 8 16 16 C 1.50696 * 113.61986 * 219.93363 * 4 3 2 17 17 C 1.38259 * 119.98987 * 342.34477 * 16 4 3 18 18 C 1.38224 * 120.02331 * 179.76344 * 17 16 4 19 19 C 1.38233 * 120.01419 * 0.51271 * 18 17 16 20 20 C 1.38329 * 119.98580 * 359.74406 * 19 18 17 21 21 Cl 1.73601 * 120.01291 * 179.97438 * 20 19 18 22 22 C 1.38188 * 119.99532 * 162.61692 * 16 4 3 23 23 C 1.53777 * 113.61555 * 97.49939 * 2 1 3 24 24 H 1.08999 * 109.47349 * 59.99566 * 1 2 3 25 25 H 1.08997 * 109.47581 * 180.02562 * 1 2 3 26 26 H 1.09008 * 109.47416 * 299.99878 * 1 2 3 27 27 H 1.09000 * 112.90273 * 228.75154 * 2 1 3 28 28 H 1.09007 * 113.61587 * 25.43221 * 3 2 1 29 29 H 1.09004 * 113.61584 * 254.53179 * 3 2 1 30 30 H 0.96998 * 119.99997 * 354.97026 * 7 5 4 31 31 H 0.97002 * 119.99884 * 180.02562 * 11 10 8 32 32 H 1.07999 * 119.99049 * 0.02562 * 17 16 4 33 33 H 1.08002 * 119.99349 * 180.27646 * 18 17 16 34 34 H 1.07997 * 120.00594 * 179.71977 * 19 18 17 35 35 H 1.08003 * 120.00707 * 0.02562 * 22 16 4 36 36 H 1.09004 * 113.61701 * 105.46353 * 23 2 1 37 37 H 1.09008 * 113.61352 * 334.56491 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.1460 1.4090 0.0000 4 6 3.1923 0.8661 0.9876 5 6 4.4073 0.2781 0.3172 6 8 4.6531 -0.9036 0.4359 7 7 5.2205 1.0655 -0.4143 8 6 6.3797 0.5546 -0.9384 9 1 6.6414 -0.4787 -0.7648 10 6 7.2154 1.3648 -1.6974 11 7 6.8972 2.6223 -1.9083 12 14 8.7911 0.6665 -2.4178 13 1 8.4627 -0.4612 -3.3265 14 1 9.4987 1.7262 -3.1805 15 1 9.6642 0.1795 -1.3199 16 6 3.5423 1.8336 2.0887 17 6 3.2370 3.1752 1.9529 18 6 3.5533 4.0623 2.9645 19 6 4.1846 3.6104 4.1082 20 6 4.4951 2.2691 4.2424 21 17 5.2885 1.7009 5.6781 22 6 4.1733 1.3806 3.2316 23 6 2.1460 -0.1839 1.3969 24 1 -0.3634 0.5139 -0.8899 25 1 -0.3634 -1.0276 0.0005 26 1 -0.3634 0.5138 0.8900 27 1 1.9542 -0.6620 -0.7549 28 1 1.4945 2.1704 0.4289 29 1 2.5650 1.7024 -0.9626 30 1 4.9857 1.9937 -0.5700 31 1 7.4804 3.1877 -2.4384 32 1 2.7474 3.5294 1.0578 33 1 3.3105 5.1095 2.8598 34 1 4.4357 4.3044 4.8966 35 1 4.4161 0.3333 3.3356 36 1 2.5650 -1.1765 1.5622 37 1 1.4945 0.1420 2.2078 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000294506394.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:38:48 Heat of formation + Delta-G solvation = -11.275192 kcal Electronic energy + Delta-G solvation = -21358.822597 eV Core-core repulsion = 18126.909205 eV Total energy + Delta-G solvation = -3231.913393 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 293.092 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -40.53567 -38.39319 -36.82890 -36.21820 -33.94978 -31.86297 -31.09475 -30.57631 -28.77733 -25.65348 -25.31431 -23.73398 -22.31837 -21.34866 -20.13870 -18.30731 -17.72835 -16.94575 -16.02778 -15.25135 -15.02560 -14.88116 -14.34903 -14.19010 -13.99254 -13.59074 -13.38201 -13.15360 -12.82330 -12.60424 -12.15958 -12.01984 -11.62921 -11.49650 -11.34656 -11.27953 -11.08804 -10.82177 -10.76971 -10.56986 -10.45652 -10.23630 -9.96328 -9.81220 -9.51849 -8.87220 -8.57802 -8.17920 -7.99503 -6.44360 -3.84863 1.34265 1.45915 2.27706 3.17899 3.24436 3.28767 3.73402 3.85365 4.14400 4.64983 4.84495 4.87556 4.91402 5.03028 5.13144 5.21918 5.33026 5.35831 5.54392 5.62672 5.68178 5.84532 5.90127 5.93172 5.96520 6.06122 6.15100 6.18552 6.33982 6.38957 6.45017 6.48708 6.62324 6.73284 6.82485 6.97657 7.52250 8.02404 8.57160 9.13823 9.51416 10.01576 10.72788 Molecular weight = 293.09amu Principal moments of inertia in cm(-1) A = 0.010898 B = 0.006352 C = 0.004803 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2568.591161 B = 4407.129623 C = 5827.987143 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.137 4.137 2 C -0.112 4.112 3 C -0.125 4.125 4 C -0.058 4.058 5 C 0.466 3.534 6 O -0.589 6.589 7 N -0.550 5.550 8 C -0.302 4.302 9 H 0.103 0.897 10 C 0.026 3.974 11 N -0.897 5.897 12 Si 0.929 3.071 13 H -0.273 1.273 14 H -0.284 1.284 15 H -0.273 1.273 16 C -0.037 4.037 17 C -0.109 4.109 18 C -0.107 4.107 19 C -0.120 4.120 20 C -0.031 4.031 21 Cl -0.080 7.080 22 C -0.095 4.095 23 C -0.107 4.107 24 H 0.054 0.946 25 H 0.052 0.948 26 H 0.052 0.948 27 H 0.093 0.907 28 H 0.087 0.913 29 H 0.075 0.925 30 H 0.393 0.607 31 H 0.273 0.727 32 H 0.131 0.869 33 H 0.130 0.870 34 H 0.128 0.872 35 H 0.133 0.867 36 H 0.083 0.917 37 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.248 3.709 8.343 13.725 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.195 4.195 2 C -0.131 4.131 3 C -0.163 4.163 4 C -0.062 4.062 5 C 0.251 3.749 6 O -0.474 6.474 7 N -0.184 5.184 8 C -0.432 4.432 9 H 0.121 0.879 10 C -0.177 4.177 11 N -0.538 5.538 12 Si 0.756 3.244 13 H -0.198 1.198 14 H -0.209 1.209 15 H -0.198 1.198 16 C -0.037 4.037 17 C -0.127 4.127 18 C -0.125 4.125 19 C -0.139 4.139 20 C -0.058 4.058 21 Cl -0.051 7.051 22 C -0.114 4.114 23 C -0.144 4.144 24 H 0.073 0.927 25 H 0.072 0.928 26 H 0.071 0.929 27 H 0.111 0.889 28 H 0.105 0.895 29 H 0.093 0.907 30 H 0.227 0.773 31 H 0.083 0.917 32 H 0.149 0.851 33 H 0.147 0.853 34 H 0.146 0.854 35 H 0.151 0.849 36 H 0.102 0.898 37 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -9.873 3.029 8.433 13.333 hybrid contribution 0.943 0.346 -0.335 1.060 sum -8.930 3.375 8.098 12.518 Atomic orbital electron populations 1.21696 0.95054 1.01381 1.01342 1.22404 0.94959 0.97341 0.98346 1.23160 0.96743 0.97094 0.99307 1.20855 0.94818 0.96066 0.94451 1.18954 0.84861 0.86854 0.84189 1.90509 1.74905 1.15855 1.66154 1.41767 1.19364 1.12536 1.44708 1.19678 0.96712 0.98160 1.28617 0.87941 1.25264 0.99775 0.95249 0.97369 1.69605 1.38887 1.05565 1.39695 0.85940 0.81036 0.78315 0.79098 1.19833 1.20893 1.19836 1.19491 0.96684 0.93806 0.93762 1.21193 0.99987 0.92461 0.99104 1.21027 0.98637 0.99743 0.93107 1.20956 1.00377 0.93515 0.99070 1.20845 1.01057 0.94269 0.89606 1.98349 1.79132 1.89592 1.38057 1.20926 0.98053 1.00190 0.92217 1.22911 0.95513 0.99544 0.96474 0.92739 0.92842 0.92854 0.88876 0.89505 0.90672 0.77331 0.91739 0.85106 0.85253 0.85400 0.84882 0.89824 0.90181 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.58 9.71 37.16 0.36 -1.22 16 2 C -0.11 -1.66 4.08 -89.81 -0.37 -2.03 16 3 C -0.13 -1.89 5.86 -25.92 -0.15 -2.04 16 4 C -0.06 -1.04 0.92 -156.00 -0.14 -1.18 16 5 C 0.47 10.95 6.25 -10.98 -0.07 10.88 16 6 O -0.59 -15.82 15.55 5.55 0.09 -15.74 16 7 N -0.55 -13.93 5.28 -10.96 -0.06 -13.99 16 8 C -0.30 -8.41 9.68 -14.93 -0.14 -8.56 16 9 H 0.10 2.98 7.17 -52.49 -0.38 2.61 16 10 C 0.03 0.69 5.50 -17.47 -0.10 0.59 16 11 N -0.90 -24.26 13.05 55.50 0.72 -23.53 16 12 Si 0.93 21.06 29.55 -169.99 -5.02 16.03 16 13 H -0.27 -6.13 7.11 56.52 0.40 -5.73 16 14 H -0.28 -6.26 7.11 56.52 0.40 -5.86 16 15 H -0.27 -6.18 7.11 56.52 0.40 -5.77 16 16 C -0.04 -0.61 4.87 -104.63 -0.51 -1.12 16 17 C -0.11 -1.58 9.05 -39.58 -0.36 -1.94 16 18 C -0.11 -1.38 10.05 -39.59 -0.40 -1.78 16 19 C -0.12 -1.62 9.83 -39.55 -0.39 -2.01 16 20 C -0.03 -0.48 6.32 -39.50 -0.25 -0.73 16 21 Cl -0.08 -1.14 28.96 -51.86 -1.50 -2.64 16 22 C -0.10 -1.62 9.25 -39.55 -0.37 -1.99 16 23 C -0.11 -1.69 6.53 -25.92 -0.17 -1.86 16 24 H 0.05 0.58 8.14 -51.93 -0.42 0.15 16 25 H 0.05 0.58 8.14 -51.93 -0.42 0.15 16 26 H 0.05 0.56 7.94 -51.92 -0.41 0.15 16 27 H 0.09 1.58 8.14 -51.93 -0.42 1.15 16 28 H 0.09 1.08 6.79 -51.93 -0.35 0.73 16 29 H 0.07 1.22 8.09 -51.93 -0.42 0.80 16 30 H 0.39 9.68 7.90 -40.82 -0.32 9.36 16 31 H 0.27 7.00 8.31 -40.82 -0.34 6.66 16 32 H 0.13 1.67 6.44 -52.49 -0.34 1.33 16 33 H 0.13 1.28 8.06 -52.49 -0.42 0.86 16 34 H 0.13 1.42 8.06 -52.49 -0.42 1.00 16 35 H 0.13 2.39 8.06 -52.48 -0.42 1.97 16 36 H 0.08 1.49 7.35 -51.93 -0.38 1.10 16 37 H 0.08 1.10 7.92 -51.92 -0.41 0.68 16 LS Contribution 328.11 15.07 4.94 4.94 Total: -1.00 -29.98 328.11 -8.56 -38.54 By element: Atomic # 1 Polarization: 16.03 SS G_CDS: -4.69 Total: 11.34 kcal Atomic # 6 Polarization: -11.92 SS G_CDS: -3.05 Total: -14.97 kcal Atomic # 7 Polarization: -38.18 SS G_CDS: 0.67 Total: -37.52 kcal Atomic # 8 Polarization: -15.82 SS G_CDS: 0.09 Total: -15.74 kcal Atomic # 14 Polarization: 21.06 SS G_CDS: -5.02 Total: 16.03 kcal Atomic # 17 Polarization: -1.14 SS G_CDS: -1.50 Total: -2.64 kcal Total LS contribution 4.94 Total: 4.94 kcal Total: -29.98 -8.56 -38.54 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000294506394.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.265 kcal (2) G-P(sol) polarization free energy of solvation -29.976 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.711 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.564 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.540 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.275 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds