Wall clock time and date at job start Tue Mar 31 2020 06:51:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.37946 * 120.06798 * 2 1 4 4 C 1.38380 * 120.18239 * 180.30108 * 3 2 1 5 5 C 1.38309 * 120.31422 * 359.44731 * 4 3 2 6 6 C 1.38111 * 120.13574 * 0.30086 * 5 4 3 7 7 Cl 1.73595 * 120.09508 * 180.02562 * 6 5 4 8 8 C 1.39589 * 120.07156 * 179.77320 * 2 1 3 9 9 C 1.47771 * 120.15155 * 359.95326 * 8 2 1 10 10 O 1.21560 * 119.99658 * 273.61209 * 9 8 2 11 11 N 1.34774 * 120.00036 * 93.61329 * 9 8 2 12 12 C 1.46502 * 119.99971 * 185.08777 * 11 9 8 13 13 C 1.52998 * 109.46885 * 184.40922 * 12 11 9 14 14 C 1.50697 * 115.55158 * 64.95929 * 13 12 11 15 15 H 1.08000 * 119.99875 * 266.29887 * 14 13 12 16 16 C 1.37875 * 120.00207 * 86.29262 * 14 13 12 17 17 N 1.31519 * 120.00283 * 181.75154 * 16 14 13 18 18 Si 1.86804 * 119.99967 * 1.75353 * 16 14 13 19 19 H 1.48500 * 109.47261 * 84.86429 * 18 16 14 20 20 H 1.48504 * 109.46868 * 204.86330 * 18 16 14 21 21 H 1.48498 * 109.47033 * 324.85785 * 18 16 14 22 22 C 1.52999 * 117.50269 * 279.28411 * 13 12 11 23 23 C 1.53002 * 117.49617 * 210.62204 * 13 12 11 24 24 H 1.08996 * 109.46748 * 270.22795 * 1 2 3 25 25 H 1.09003 * 109.47330 * 30.22947 * 1 2 3 26 26 H 1.08995 * 109.47043 * 150.22696 * 1 2 3 27 27 H 1.07999 * 119.90796 * 0.02562 * 3 2 1 28 28 H 1.08001 * 119.83851 * 179.72111 * 4 3 2 29 29 H 1.08007 * 119.93150 * 180.27594 * 5 4 3 30 30 H 0.96997 * 119.99997 * 5.08908 * 11 9 8 31 31 H 1.08995 * 109.47243 * 304.41435 * 12 11 9 32 32 H 1.09000 * 109.46855 * 64.41255 * 12 11 9 33 33 H 0.96999 * 120.00480 * 180.02562 * 17 16 14 34 34 H 1.09001 * 117.49779 * 0.02562 * 22 13 12 35 35 H 1.08997 * 117.50108 * 145.02141 * 22 13 12 36 36 H 1.09006 * 117.49951 * 214.98112 * 23 13 12 37 37 H 1.09001 * 117.50252 * 359.97438 * 23 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1938 0.0000 4 6 3.5819 1.1966 -0.0063 5 6 4.2824 0.0040 -0.0011 6 6 3.6037 -1.1988 0.0041 7 17 4.4840 -2.6950 0.0113 8 6 2.2064 -1.2080 0.0048 9 6 1.4726 -2.4906 0.0109 10 8 1.1139 -2.9805 1.0640 11 7 1.2009 -3.1171 -1.1510 12 6 0.3782 -4.3293 -1.1547 13 6 0.3146 -4.8981 -2.5736 14 6 1.6232 -5.3907 -3.1357 15 1 2.2344 -4.7335 -3.7364 16 6 2.0403 -6.6803 -2.8829 17 7 3.1983 -7.0994 -3.3444 18 14 0.9604 -7.8325 -1.8848 19 1 -0.0339 -8.4779 -2.7792 20 1 1.8048 -8.8755 -1.2490 21 1 0.2521 -7.0599 -0.8329 22 6 -0.6762 -4.2577 -3.5478 23 6 -0.9552 -5.6504 -2.9768 24 1 -0.3633 0.0041 1.0276 25 1 -0.3634 0.8879 -0.5174 26 1 -0.3633 -0.8920 -0.5103 27 1 1.6577 2.1289 0.0004 28 1 4.1174 2.1345 -0.0108 29 1 5.3625 0.0135 -0.0015 30 1 1.5502 -2.7655 -1.9848 31 1 0.8181 -5.0690 -0.4860 32 1 -0.6287 -4.0860 -0.8154 33 1 3.4916 -8.0068 -3.1669 34 1 -1.2826 -3.4308 -3.1780 35 1 -0.3818 -4.1930 -4.5952 36 1 -0.8441 -6.5013 -3.6490 37 1 -1.7452 -5.7404 -2.2312 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000451597912.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:51:30 Heat of formation + Delta-G solvation = 0.366772 kcal Electronic energy + Delta-G solvation = -21168.641325 eV Core-core repulsion = 17937.232766 eV Total energy + Delta-G solvation = -3231.408559 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 293.092 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -40.14437 -38.37557 -36.97808 -36.38680 -33.47199 -32.86461 -32.11744 -31.06326 -27.45883 -26.66187 -25.28778 -23.32148 -21.85465 -21.71186 -20.00205 -19.27686 -17.57296 -16.44892 -16.14069 -16.10800 -15.44011 -15.01102 -14.70408 -14.03414 -13.90000 -13.81097 -13.53091 -13.02674 -12.79618 -12.78516 -12.61148 -12.44164 -12.04844 -11.74320 -11.50349 -11.25198 -11.17148 -10.79546 -10.78021 -10.49877 -10.21845 -9.79392 -9.51521 -9.20380 -8.92985 -8.73429 -8.67881 -8.56234 -8.34229 -6.14166 -4.18713 0.93055 1.06655 2.19243 2.94260 3.29209 3.36130 3.39586 3.43698 3.67730 4.40800 4.58239 4.66936 4.78017 5.00871 5.07038 5.13803 5.15100 5.30430 5.52573 5.56815 5.59260 5.66674 5.96252 5.98958 6.02826 6.04301 6.12444 6.18493 6.28366 6.39462 6.48361 6.60783 6.68338 6.96551 7.05163 7.07569 7.67622 8.06608 8.41964 8.64429 8.86181 9.48724 10.97133 Molecular weight = 293.09amu Principal moments of inertia in cm(-1) A = 0.018584 B = 0.005559 C = 0.004813 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1506.338177 B = 5036.093344 C = 5816.763139 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 C -0.040 4.040 3 C -0.123 4.123 4 C -0.094 4.094 5 C -0.120 4.120 6 C -0.005 4.005 7 Cl -0.042 7.042 8 C -0.111 4.111 9 C 0.558 3.442 10 O -0.540 6.540 11 N -0.689 5.689 12 C 0.155 3.845 13 C -0.016 4.016 14 C -0.489 4.489 15 H 0.078 0.922 16 C 0.082 3.918 17 N -0.893 5.893 18 Si 0.878 3.122 19 H -0.276 1.276 20 H -0.295 1.295 21 H -0.259 1.259 22 C -0.178 4.178 23 C -0.194 4.194 24 H 0.078 0.922 25 H 0.074 0.926 26 H 0.071 0.929 27 H 0.132 0.868 28 H 0.133 0.867 29 H 0.137 0.863 30 H 0.405 0.595 31 H 0.069 0.931 32 H 0.044 0.956 33 H 0.265 0.735 34 H 0.073 0.927 35 H 0.088 0.912 36 H 0.091 0.909 37 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.067 16.512 5.013 17.380 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C -0.041 4.041 3 C -0.141 4.141 4 C -0.112 4.112 5 C -0.139 4.139 6 C -0.032 4.032 7 Cl -0.012 7.012 8 C -0.115 4.115 9 C 0.342 3.658 10 O -0.419 6.419 11 N -0.337 5.337 12 C 0.031 3.969 13 C -0.017 4.017 14 C -0.526 4.526 15 H 0.096 0.904 16 C -0.122 4.122 17 N -0.530 5.530 18 Si 0.706 3.294 19 H -0.202 1.202 20 H -0.221 1.221 21 H -0.184 1.184 22 C -0.215 4.215 23 C -0.232 4.232 24 H 0.097 0.903 25 H 0.093 0.907 26 H 0.090 0.910 27 H 0.150 0.850 28 H 0.151 0.849 29 H 0.155 0.845 30 H 0.240 0.760 31 H 0.087 0.913 32 H 0.062 0.938 33 H 0.075 0.925 34 H 0.091 0.909 35 H 0.106 0.894 36 H 0.109 0.891 37 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -2.137 15.826 5.735 16.968 hybrid contribution -0.106 -0.786 0.083 0.797 sum -2.243 15.041 5.818 16.282 Atomic orbital electron populations 1.20880 0.90153 1.03433 1.03202 1.19869 0.96443 0.91078 0.96739 1.21030 0.94250 0.97413 1.01377 1.21188 0.94130 0.97651 0.98246 1.21006 1.00652 0.90429 1.01833 1.21053 0.91162 0.88893 1.02138 1.98453 1.75187 1.31203 1.96396 1.19869 0.92074 0.94685 1.04876 1.17990 0.79482 0.83722 0.84638 1.90773 1.53567 1.66451 1.31084 1.45834 1.51840 1.27429 1.08586 1.21215 0.92136 0.85346 0.98162 1.19626 0.91571 0.99638 0.90884 1.20153 1.01573 0.98103 1.32771 0.90354 1.24948 0.94631 0.97942 0.94651 1.69881 1.19852 1.17992 1.45273 0.86895 0.80517 0.80762 0.81225 1.20234 1.22142 1.18370 1.22841 1.04404 0.94571 0.99707 1.22973 1.00400 0.95856 1.03925 0.90300 0.90737 0.90962 0.85020 0.84883 0.84516 0.75992 0.91298 0.93812 0.92501 0.90901 0.89363 0.89058 0.90749 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.34 9.62 36.00 0.35 -0.99 16 2 C -0.04 -0.52 5.91 -104.23 -0.62 -1.13 16 3 C -0.12 -1.23 9.69 -39.64 -0.38 -1.61 16 4 C -0.09 -0.90 10.04 -39.50 -0.40 -1.30 16 5 C -0.12 -1.41 9.82 -39.60 -0.39 -1.80 16 6 C 0.00 -0.08 6.35 -39.07 -0.25 -0.32 16 7 Cl -0.04 -0.72 28.04 -51.86 -1.45 -2.18 16 8 C -0.11 -1.77 5.64 -104.94 -0.59 -2.36 16 9 C 0.56 10.64 4.77 -12.36 -0.06 10.58 16 10 O -0.54 -12.08 17.09 5.31 0.09 -11.99 16 11 N -0.69 -13.24 5.45 -61.28 -0.33 -13.57 16 12 C 0.15 3.27 5.22 -4.04 -0.02 3.25 16 13 C -0.02 -0.35 0.84 -155.66 -0.13 -0.48 16 14 C -0.49 -12.88 9.29 -34.44 -0.32 -13.20 16 15 H 0.08 2.24 8.06 -52.49 -0.42 1.81 16 16 C 0.08 2.27 5.47 -17.82 -0.10 2.18 16 17 N -0.89 -26.61 13.96 55.43 0.77 -25.84 16 18 Si 0.88 21.65 24.75 -169.99 -4.21 17.44 16 19 H -0.28 -6.59 7.03 56.52 0.40 -6.19 16 20 H -0.29 -7.41 7.11 56.52 0.40 -7.01 16 21 H -0.26 -6.18 5.99 56.52 0.34 -5.84 16 22 C -0.18 -3.34 9.96 -26.69 -0.27 -3.61 16 23 C -0.19 -3.93 7.60 -26.69 -0.20 -4.13 16 24 H 0.08 0.86 8.14 -51.93 -0.42 0.44 16 25 H 0.07 0.62 8.09 -51.93 -0.42 0.20 16 26 H 0.07 0.92 7.08 -51.93 -0.37 0.55 16 27 H 0.13 0.93 8.06 -52.49 -0.42 0.51 16 28 H 0.13 0.85 8.06 -52.49 -0.42 0.42 16 29 H 0.14 1.32 8.06 -52.48 -0.42 0.90 16 30 H 0.41 7.43 8.43 -40.82 -0.34 7.08 16 31 H 0.07 1.65 6.75 -51.93 -0.35 1.30 16 32 H 0.04 0.86 8.09 -51.93 -0.42 0.44 16 33 H 0.27 7.51 8.31 -40.82 -0.34 7.17 16 34 H 0.07 1.20 8.14 -51.93 -0.42 0.77 16 35 H 0.09 1.66 8.14 -51.93 -0.42 1.24 16 36 H 0.09 1.95 7.09 -51.93 -0.37 1.58 16 37 H 0.07 1.37 8.14 -51.93 -0.42 0.95 16 LS Contribution 328.28 15.07 4.95 4.95 Total: -1.00 -31.39 328.28 -8.42 -39.81 By element: Atomic # 1 Polarization: 11.18 SS G_CDS: -4.86 Total: 6.32 kcal Atomic # 6 Polarization: -11.57 SS G_CDS: -3.38 Total: -14.94 kcal Atomic # 7 Polarization: -39.85 SS G_CDS: 0.44 Total: -39.41 kcal Atomic # 8 Polarization: -12.08 SS G_CDS: 0.09 Total: -11.99 kcal Atomic # 14 Polarization: 21.65 SS G_CDS: -4.21 Total: 17.44 kcal Atomic # 17 Polarization: -0.72 SS G_CDS: -1.45 Total: -2.18 kcal Total LS contribution 4.95 Total: 4.95 kcal Total: -31.39 -8.42 -39.81 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000451597912.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.172 kcal (2) G-P(sol) polarization free energy of solvation -31.389 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.783 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.416 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.805 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.367 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds