Wall clock time and date at job start Tue Mar 31 2020 07:28:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53002 * 109.47539 * 2 1 4 4 H 1.09003 * 115.55698 * 29.30608 * 3 2 1 5 5 C 1.52998 * 117.49889 * 243.62203 * 3 2 1 6 6 C 1.52997 * 60.00107 * 252.50807 * 5 3 2 7 7 H 1.08999 * 117.49930 * 107.50917 * 6 5 3 8 8 C 1.50700 * 117.50095 * 252.51261 * 6 5 3 9 9 O 1.21284 * 119.99731 * 68.60276 * 8 6 5 10 10 N 1.34774 * 119.99683 * 248.61146 * 8 6 5 11 11 C 1.39273 * 119.99568 * 185.32974 * 10 8 6 12 12 C 1.39462 * 119.83861 * 20.66503 * 11 10 8 13 13 C 1.36373 * 120.17761 * 180.02562 * 12 11 10 14 14 C 1.40893 * 119.85067 * 0.02562 * 13 12 11 15 15 C 1.41146 * 120.15756 * 180.02562 * 14 13 12 16 16 H 1.08003 * 119.99923 * 152.71928 * 15 14 13 17 17 C 1.39907 * 120.00308 * 332.71541 * 15 14 13 18 18 N 1.30874 * 119.99818 * 159.45749 * 17 15 14 19 19 Si 1.86802 * 119.99703 * 339.45937 * 17 15 14 20 20 H 1.48506 * 109.46959 * 95.19089 * 19 17 15 21 21 H 1.48497 * 109.46691 * 215.18877 * 19 17 15 22 22 H 1.48498 * 109.47117 * 335.19085 * 19 17 15 23 23 C 1.40837 * 119.68408 * 359.97438 * 14 13 12 24 24 C 1.36483 * 119.81619 * 0.02562 * 23 14 13 25 25 Cl 1.73594 * 119.92538 * 179.97438 * 24 23 14 26 26 H 1.08999 * 109.46814 * 59.99693 * 1 2 3 27 27 H 1.08995 * 109.47303 * 179.97438 * 1 2 3 28 28 H 1.08998 * 109.46847 * 300.00366 * 1 2 3 29 29 H 1.08998 * 109.46847 * 239.99634 * 2 1 3 30 30 H 1.09001 * 109.47088 * 119.99840 * 2 1 3 31 31 H 1.08999 * 117.49623 * 145.01396 * 5 3 2 32 32 H 1.09000 * 117.51525 * 359.97438 * 5 3 2 33 33 H 0.96994 * 120.00501 * 5.32802 * 10 8 6 34 34 H 1.07993 * 119.91416 * 359.97438 * 12 11 10 35 35 H 1.08005 * 120.07688 * 180.02562 * 13 12 11 36 36 H 0.97001 * 119.99390 * 180.02562 * 18 17 15 37 37 H 1.07997 * 120.09229 * 179.72266 * 23 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 1 1.3884 2.1717 0.4813 5 6 2.8441 1.9075 -1.2158 6 6 3.5503 1.6578 0.1183 7 1 4.1806 0.7720 0.1960 8 6 4.0230 2.8619 0.8914 9 8 3.2159 3.6168 1.3912 10 7 5.3425 3.0999 1.0273 11 6 5.7817 4.1475 1.8331 12 6 4.9399 4.6666 2.8165 13 6 5.3627 5.6927 3.6090 14 6 6.6534 6.2293 3.4325 15 6 7.0979 7.2910 4.2495 16 1 8.1526 7.4175 4.4442 17 6 6.1721 8.1795 4.8070 18 7 6.4993 8.8942 5.8534 19 14 4.4690 8.3456 4.0578 20 1 3.5204 7.4638 4.7845 21 1 4.0160 9.7557 4.1661 22 1 4.5166 7.9494 2.6275 23 6 7.4985 5.7005 2.4376 24 6 7.0618 4.6735 1.6519 25 17 8.1009 4.0200 0.4243 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3633 0.5139 0.8899 29 1 1.8933 -0.5139 -0.8899 30 1 1.8933 -0.5138 0.8900 31 1 2.7214 2.9426 -1.5344 32 1 3.0102 1.1858 -2.0157 33 1 5.9863 2.5417 0.5640 34 1 3.9503 4.2554 2.9501 35 1 4.7096 6.0932 4.3703 36 1 5.8573 9.5100 6.2401 37 1 8.4875 6.1097 2.2936 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000452642463.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:28:05 Heat of formation + Delta-G solvation = -9.699762 kcal Electronic energy + Delta-G solvation = -20464.044070 eV Core-core repulsion = 17232.198994 eV Total energy + Delta-G solvation = -3231.845077 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 293.092 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -40.18925 -38.24650 -36.85325 -35.83302 -34.50675 -33.24611 -32.21437 -29.81732 -29.75307 -25.86453 -24.13138 -23.49394 -22.04351 -21.18185 -20.47017 -19.57125 -17.72512 -17.44360 -16.63493 -15.48127 -15.03008 -14.91521 -14.55407 -14.36593 -14.29460 -13.82299 -12.99035 -12.93202 -12.77602 -12.60363 -12.52540 -12.31640 -12.21625 -11.60492 -11.50079 -11.19800 -11.03977 -10.91084 -10.72199 -10.57703 -10.37360 -10.22927 -10.12566 -9.85487 -9.66551 -9.18641 -8.92616 -7.83363 -7.26175 -7.09976 -4.54873 2.12324 2.46487 2.84157 2.86557 3.10914 3.18891 3.30774 3.44491 3.80204 3.92050 4.34255 4.54347 4.65982 4.74668 5.00439 5.12879 5.16550 5.25413 5.27437 5.51117 5.62063 5.73689 5.82803 5.91236 5.93765 5.95797 6.23613 6.25822 6.42747 6.54368 6.72959 6.89139 7.14611 7.17102 7.45342 7.71100 7.82453 7.99680 8.19210 8.42961 8.60545 8.65839 9.90616 Molecular weight = 293.09amu Principal moments of inertia in cm(-1) A = 0.016897 B = 0.004501 C = 0.003690 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1656.680814 B = 6218.692437 C = 7586.236983 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.094 4.094 3 C -0.118 4.118 4 H 0.118 0.882 5 C -0.150 4.150 6 C -0.187 4.187 7 H 0.121 0.879 8 C 0.529 3.471 9 O -0.531 6.531 10 N -0.643 5.643 11 C 0.001 3.999 12 C -0.067 4.067 13 C -0.227 4.227 14 C 0.092 3.908 15 C -0.433 4.433 16 H 0.095 0.905 17 C 0.085 3.915 18 N -0.794 5.794 19 Si 0.911 3.089 20 H -0.267 1.267 21 H -0.289 1.289 22 H -0.243 1.243 23 C -0.192 4.192 24 C -0.002 4.002 25 Cl -0.114 7.114 26 H 0.055 0.945 27 H 0.054 0.946 28 H 0.057 0.943 29 H 0.064 0.936 30 H 0.067 0.933 31 H 0.099 0.901 32 H 0.102 0.898 33 H 0.401 0.599 34 H 0.137 0.863 35 H 0.108 0.892 36 H 0.289 0.711 37 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.269 -13.405 -10.583 18.193 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.132 4.132 3 C -0.137 4.137 4 H 0.136 0.864 5 C -0.188 4.188 6 C -0.209 4.209 7 H 0.139 0.861 8 C 0.317 3.683 9 O -0.409 6.409 10 N -0.285 5.285 11 C -0.092 4.092 12 C -0.087 4.087 13 C -0.247 4.247 14 C 0.088 3.912 15 C -0.460 4.460 16 H 0.113 0.887 17 C -0.136 4.136 18 N -0.417 5.417 19 Si 0.737 3.263 20 H -0.193 1.193 21 H -0.216 1.216 22 H -0.166 1.166 23 C -0.212 4.212 24 C -0.030 4.030 25 Cl -0.086 7.086 26 H 0.074 0.926 27 H 0.073 0.927 28 H 0.076 0.924 29 H 0.082 0.918 30 H 0.086 0.914 31 H 0.117 0.883 32 H 0.120 0.880 33 H 0.236 0.764 34 H 0.154 0.846 35 H 0.126 0.874 36 H 0.099 0.901 37 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -6.747 -12.744 -10.116 17.615 hybrid contribution -0.027 -0.107 -0.475 0.487 sum -6.774 -12.851 -10.591 17.978 Atomic orbital electron populations 1.21738 0.95244 1.01495 1.02212 1.21150 0.96221 0.93750 1.02046 1.22468 0.91531 0.98579 1.01108 0.86353 1.23096 1.02230 1.03153 0.90288 1.22286 0.97611 0.98930 1.02041 0.86095 1.19581 0.82159 0.85777 0.80822 1.90605 1.54033 1.47875 1.48363 1.42893 1.06974 1.31681 1.46940 1.16853 0.94313 0.98143 0.99938 1.20790 0.99151 0.96385 0.92323 1.20833 0.98518 1.01291 1.04038 1.17632 0.90866 0.92660 0.90061 1.19470 0.96722 1.07982 1.21837 0.88749 1.26219 1.01018 0.93906 0.92453 1.69719 1.37847 1.18885 1.15257 0.86317 0.80531 0.76583 0.82864 1.19272 1.21590 1.16586 1.20487 1.01816 0.99986 0.98927 1.20189 0.90486 0.98400 0.93972 1.98265 1.67978 1.86245 1.56093 0.92561 0.92731 0.92424 0.91764 0.91422 0.88257 0.87975 0.76421 0.84557 0.87390 0.90084 0.86639 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.16 9.87 37.16 0.37 -0.80 16 2 C -0.09 -0.80 6.22 -26.73 -0.17 -0.96 16 3 C -0.12 -1.30 5.25 -90.62 -0.48 -1.77 16 4 H 0.12 1.54 7.60 -51.93 -0.39 1.14 16 5 C -0.15 -1.55 9.88 -26.73 -0.26 -1.81 16 6 C -0.19 -2.25 5.91 -91.77 -0.54 -2.80 16 7 H 0.12 1.18 8.14 -51.93 -0.42 0.76 16 8 C 0.53 8.94 7.45 -10.99 -0.08 8.86 16 9 O -0.53 -10.92 13.15 5.55 0.07 -10.85 16 10 N -0.64 -11.13 5.21 -9.71 -0.05 -11.18 16 11 C 0.00 0.03 6.50 -83.52 -0.54 -0.51 16 12 C -0.07 -1.54 8.69 -39.80 -0.35 -1.89 16 13 C -0.23 -5.55 7.19 -39.25 -0.28 -5.83 16 14 C 0.09 2.28 5.15 -106.81 -0.55 1.73 16 15 C -0.43 -11.34 9.55 -37.85 -0.36 -11.70 16 16 H 0.09 2.55 8.06 -52.48 -0.42 2.13 16 17 C 0.09 2.18 5.38 -17.34 -0.09 2.08 16 18 N -0.79 -20.53 13.93 55.55 0.77 -19.76 16 19 Si 0.91 20.86 24.52 -169.99 -4.17 16.69 16 20 H -0.27 -6.00 6.64 56.52 0.38 -5.62 16 21 H -0.29 -6.31 7.11 56.52 0.40 -5.91 16 22 H -0.24 -5.83 6.93 56.52 0.39 -5.44 16 23 C -0.19 -4.38 9.50 -39.23 -0.37 -4.75 16 24 C 0.00 -0.05 6.30 -39.71 -0.25 -0.30 16 25 Cl -0.11 -1.95 27.68 -51.86 -1.44 -3.38 16 26 H 0.06 0.42 8.14 -51.93 -0.42 0.00 16 27 H 0.05 0.36 8.14 -51.93 -0.42 -0.06 16 28 H 0.06 0.48 8.14 -51.93 -0.42 0.06 16 29 H 0.06 0.46 7.88 -51.93 -0.41 0.06 16 30 H 0.07 0.57 8.14 -51.93 -0.42 0.15 16 31 H 0.10 1.13 8.14 -51.93 -0.42 0.71 16 32 H 0.10 0.80 8.03 -51.93 -0.42 0.39 16 33 H 0.40 5.83 7.62 -40.82 -0.31 5.52 16 34 H 0.14 3.14 5.45 -52.49 -0.29 2.86 16 35 H 0.11 2.63 4.54 -52.48 -0.24 2.40 16 36 H 0.29 6.74 8.30 -40.82 -0.34 6.40 16 37 H 0.12 2.50 8.06 -52.49 -0.42 2.08 16 LS Contribution 322.39 15.07 4.86 4.86 Total: -1.00 -27.94 322.39 -8.52 -36.46 By element: Atomic # 1 Polarization: 12.21 SS G_CDS: -4.61 Total: 7.61 kcal Atomic # 6 Polarization: -16.47 SS G_CDS: -3.96 Total: -20.44 kcal Atomic # 7 Polarization: -31.66 SS G_CDS: 0.72 Total: -30.94 kcal Atomic # 8 Polarization: -10.92 SS G_CDS: 0.07 Total: -10.85 kcal Atomic # 14 Polarization: 20.86 SS G_CDS: -4.17 Total: 16.69 kcal Atomic # 17 Polarization: -1.95 SS G_CDS: -1.44 Total: -3.38 kcal Total LS contribution 4.86 Total: 4.86 kcal Total: -27.94 -8.52 -36.46 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000452642463.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.757 kcal (2) G-P(sol) polarization free energy of solvation -27.937 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.179 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.520 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.457 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.700 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds