Wall clock time and date at job start Tue Mar 31 2020 07:05:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31000 * 1 3 3 C 1.50700 * 119.99826 * 2 1 4 4 C 1.53000 * 109.46995 * 124.99717 * 3 2 1 5 5 C 1.53001 * 109.46773 * 179.97438 * 4 3 2 6 6 C 1.50703 * 109.46890 * 180.02562 * 5 4 3 7 7 O 1.21280 * 119.99938 * 359.97438 * 6 5 4 8 8 N 1.34773 * 119.99903 * 180.27523 * 6 5 4 9 9 C 1.39271 * 120.00128 * 175.47679 * 8 6 5 10 10 C 1.39461 * 119.83668 * 34.72089 * 9 8 6 11 11 C 1.36376 * 120.18093 * 179.75975 * 10 9 8 12 12 C 1.40892 * 119.84781 * 0.51657 * 11 10 9 13 13 C 1.41145 * 120.16128 * 179.76176 * 12 11 10 14 14 H 1.08001 * 119.99814 * 34.74879 * 13 12 11 15 15 C 1.39900 * 120.00404 * 214.74837 * 13 12 11 16 16 N 1.30882 * 119.99534 * 355.59795 * 15 13 12 17 17 Si 1.86794 * 120.00422 * 175.60089 * 15 13 12 18 18 H 1.48506 * 109.46969 * 359.97438 * 17 15 13 19 19 H 1.48491 * 109.47566 * 120.00011 * 17 15 13 20 20 H 1.48510 * 109.47089 * 240.00249 * 17 15 13 21 21 C 1.40843 * 119.68305 * 359.73781 * 12 11 10 22 22 C 1.36485 * 119.81689 * 0.02562 * 21 12 11 23 23 Cl 1.73602 * 119.92446 * 179.97438 * 22 21 12 24 24 H 1.08006 * 119.99735 * 180.02562 * 1 2 3 25 25 H 1.07990 * 120.00232 * 0.02562 * 1 2 3 26 26 H 1.08002 * 119.99832 * 179.97438 * 2 1 3 27 27 H 1.08995 * 109.47201 * 4.99602 * 3 2 1 28 28 H 1.08997 * 109.47066 * 244.99320 * 3 2 1 29 29 H 1.08995 * 109.47240 * 59.99909 * 4 3 2 30 30 H 1.09000 * 109.47315 * 299.99426 * 4 3 2 31 31 H 1.08995 * 109.47229 * 60.00004 * 5 4 3 32 32 H 1.08997 * 109.47261 * 299.99586 * 5 4 3 33 33 H 0.97008 * 120.00110 * 355.47911 * 8 6 5 34 34 H 1.07999 * 119.91196 * 0.02562 * 10 9 8 35 35 H 1.07998 * 120.07779 * 180.23059 * 11 10 9 36 36 H 0.96996 * 119.99692 * 179.97438 * 16 15 13 37 37 H 1.07997 * 120.09621 * 180.02562 * 21 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0635 1.3051 0.0000 4 6 3.0349 1.3331 1.1817 5 6 3.8003 2.6579 1.1813 6 6 4.7577 2.6853 2.3448 7 8 4.8211 1.7386 3.1003 8 7 5.5389 3.7643 2.5494 9 6 6.3546 3.8298 3.6764 10 6 6.9414 2.6678 4.1768 11 6 7.7452 2.7246 5.2770 12 6 7.9739 3.9597 5.9153 13 6 8.8007 4.0253 7.0573 14 1 9.6586 3.3747 7.1410 15 6 8.5088 4.9332 8.0810 16 7 7.5211 5.7806 7.9421 17 14 9.5288 4.9360 9.6459 18 1 10.5774 3.8884 9.5551 19 1 10.1693 6.2647 9.8169 20 1 8.6501 4.6565 10.8100 21 6 7.3740 5.1286 5.4079 22 6 6.5758 5.0572 4.3032 23 17 5.8344 6.4961 3.6759 24 1 -0.5400 -0.9354 0.0004 25 1 -0.5400 0.9352 -0.0004 26 1 1.8500 -0.9353 0.0004 27 1 1.3585 2.1316 0.0895 28 1 2.6213 1.4026 -0.9313 29 1 3.7398 0.5066 1.0922 30 1 2.4771 1.2357 2.1130 31 1 3.0957 3.4847 1.2705 32 1 4.3582 2.7549 0.2499 33 1 5.5332 4.4952 1.9117 34 1 6.7622 1.7210 3.6891 35 1 8.2017 1.8243 5.6608 36 1 7.3185 6.4098 8.6520 37 1 7.5451 6.0789 5.8917 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000452647860.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:05:07 Heat of formation + Delta-G solvation = -24.317158 kcal Electronic energy + Delta-G solvation = -20030.850719 eV Core-core repulsion = 16798.371785 eV Total energy + Delta-G solvation = -3232.478935 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 293.092 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -39.78262 -37.62980 -36.06974 -35.52978 -34.45091 -33.06135 -32.36464 -29.47299 -29.19992 -27.32876 -24.98381 -22.51819 -21.53924 -20.73411 -20.06992 -19.51237 -17.58607 -16.89841 -16.34333 -15.95593 -15.37959 -15.07873 -14.32561 -14.22231 -13.84433 -13.52987 -13.37025 -12.92593 -12.65916 -12.39422 -12.29195 -11.80908 -11.68967 -11.58809 -11.43042 -11.12440 -11.03175 -10.96335 -10.75523 -10.58738 -10.32066 -10.00259 -9.76848 -9.53298 -9.49434 -9.15997 -8.96767 -7.56229 -7.02180 -6.73179 -4.47901 2.10366 2.36679 2.82580 2.98183 3.05764 3.10670 3.14638 3.25572 3.72131 3.90679 4.55126 4.64460 4.82739 4.96719 5.10494 5.17946 5.39536 5.42009 5.53487 5.62315 5.65233 5.77786 6.08722 6.19633 6.28791 6.45400 6.52214 6.59538 6.65689 6.87031 7.00538 7.13997 7.31289 7.57260 7.66065 7.86131 8.08205 8.13815 8.42266 8.67742 8.77867 8.81763 10.17242 Molecular weight = 293.09amu Principal moments of inertia in cm(-1) A = 0.025300 B = 0.003237 C = 0.003015 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1106.461349 B = 8647.086187 C = 9283.554312 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.148 4.148 3 C -0.096 4.096 4 C -0.099 4.099 5 C -0.139 4.139 6 C 0.500 3.500 7 O -0.532 6.532 8 N -0.652 5.652 9 C 0.013 3.987 10 C -0.075 4.075 11 C -0.202 4.202 12 C 0.107 3.893 13 C -0.455 4.455 14 H 0.081 0.919 15 C 0.068 3.932 16 N -0.804 5.804 17 Si 0.918 3.082 18 H -0.261 1.261 19 H -0.273 1.273 20 H -0.273 1.273 21 C -0.136 4.136 22 C -0.022 4.022 23 Cl -0.120 7.120 24 H 0.095 0.905 25 H 0.095 0.905 26 H 0.108 0.892 27 H 0.066 0.934 28 H 0.072 0.928 29 H 0.071 0.929 30 H 0.071 0.929 31 H 0.091 0.909 32 H 0.089 0.911 33 H 0.398 0.602 34 H 0.118 0.882 35 H 0.103 0.897 36 H 0.281 0.719 37 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.180 -2.739 -12.113 14.345 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C -0.166 4.166 3 C -0.133 4.133 4 C -0.137 4.137 5 C -0.179 4.179 6 C 0.287 3.713 7 O -0.409 6.409 8 N -0.296 5.296 9 C -0.081 4.081 10 C -0.095 4.095 11 C -0.222 4.222 12 C 0.104 3.896 13 C -0.485 4.485 14 H 0.099 0.901 15 C -0.148 4.148 16 N -0.431 5.431 17 Si 0.743 3.257 18 H -0.185 1.185 19 H -0.199 1.199 20 H -0.199 1.199 21 C -0.157 4.157 22 C -0.051 4.051 23 Cl -0.092 7.092 24 H 0.113 0.887 25 H 0.113 0.887 26 H 0.126 0.874 27 H 0.085 0.915 28 H 0.090 0.910 29 H 0.090 0.910 30 H 0.090 0.910 31 H 0.109 0.891 32 H 0.108 0.892 33 H 0.232 0.768 34 H 0.136 0.864 35 H 0.121 0.879 36 H 0.092 0.908 37 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -7.346 -3.097 -11.504 13.996 hybrid contribution 0.163 0.634 0.438 0.787 sum -7.183 -2.464 -11.066 13.421 Atomic orbital electron populations 1.23833 0.96000 1.01710 1.02204 1.22986 0.96018 0.98686 0.98943 1.20814 0.98254 0.95368 0.98883 1.21267 0.97625 0.96371 0.98418 1.21671 0.98262 1.00462 0.97517 1.20656 0.80953 0.82927 0.86779 1.90675 1.67908 1.35090 1.47198 1.43018 1.41434 1.21112 1.24048 1.16935 1.03840 0.93176 0.94148 1.20393 0.95975 0.95983 0.97199 1.20907 1.04268 0.97223 0.99786 1.17616 0.90997 0.89590 0.91410 1.19537 1.10753 1.17279 1.00936 0.90060 1.25940 0.94693 0.93465 1.00690 1.69749 1.24593 1.15306 1.33409 0.86088 0.80085 0.79023 0.80496 1.18467 1.19864 1.19867 1.21210 1.00019 1.00982 0.93451 1.20439 1.02484 0.84113 0.98016 1.98249 1.82786 1.40681 1.87452 0.88690 0.88679 0.87378 0.91501 0.90971 0.91019 0.90998 0.89107 0.89220 0.76753 0.86406 0.87887 0.90830 0.83839 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -1.69 14.32 29.01 0.42 -1.27 16 2 C -0.15 -1.34 9.52 -36.03 -0.34 -1.68 16 3 C -0.10 -0.85 5.66 -27.88 -0.16 -1.00 16 4 C -0.10 -1.12 4.49 -26.73 -0.12 -1.24 16 5 C -0.14 -1.58 5.70 -27.88 -0.16 -1.74 16 6 C 0.50 8.43 7.66 -10.99 -0.08 8.35 16 7 O -0.53 -11.08 13.37 5.56 0.07 -11.00 16 8 N -0.65 -11.49 5.01 -9.71 -0.05 -11.54 16 9 C 0.01 0.28 6.32 -83.53 -0.53 -0.25 16 10 C -0.08 -1.74 8.61 -39.80 -0.34 -2.09 16 11 C -0.20 -4.90 9.74 -39.25 -0.38 -5.28 16 12 C 0.11 2.77 5.55 -106.80 -0.59 2.18 16 13 C -0.45 -11.68 9.02 -37.86 -0.34 -12.02 16 14 H 0.08 1.99 7.85 -52.49 -0.41 1.58 16 15 C 0.07 1.68 5.42 -17.33 -0.09 1.58 16 16 N -0.80 -20.44 10.60 55.55 0.59 -19.85 16 17 Si 0.92 18.48 29.56 -169.99 -5.03 13.45 16 18 H -0.26 -5.17 7.11 56.52 0.40 -4.77 16 19 H -0.27 -5.39 7.11 56.52 0.40 -4.99 16 20 H -0.27 -5.48 7.11 56.52 0.40 -5.08 16 21 C -0.14 -3.44 8.38 -39.23 -0.33 -3.76 16 22 C -0.02 -0.51 6.30 -39.71 -0.25 -0.76 16 23 Cl -0.12 -2.30 27.92 -51.86 -1.45 -3.74 16 24 H 0.09 0.70 8.06 -52.48 -0.42 0.28 16 25 H 0.09 0.74 7.84 -52.49 -0.41 0.33 16 26 H 0.11 0.93 8.06 -52.49 -0.42 0.50 16 27 H 0.07 0.55 7.79 -51.93 -0.40 0.15 16 28 H 0.07 0.56 8.14 -51.93 -0.42 0.13 16 29 H 0.07 0.87 8.10 -51.93 -0.42 0.45 16 30 H 0.07 0.94 8.10 -51.93 -0.42 0.52 16 31 H 0.09 0.89 8.14 -51.93 -0.42 0.47 16 32 H 0.09 0.81 8.14 -51.93 -0.42 0.38 16 33 H 0.40 5.86 8.05 -40.82 -0.33 5.53 16 34 H 0.12 2.67 6.18 -52.49 -0.32 2.34 16 35 H 0.10 2.34 8.06 -52.49 -0.42 1.92 16 36 H 0.28 6.53 8.30 -40.82 -0.34 6.19 16 37 H 0.14 3.79 6.13 -52.49 -0.32 3.46 16 LS Contribution 331.41 15.07 4.99 4.99 Total: -1.00 -28.39 331.41 -8.89 -37.27 By element: Atomic # 1 Polarization: 14.12 SS G_CDS: -4.72 Total: 9.41 kcal Atomic # 6 Polarization: -15.67 SS G_CDS: -3.31 Total: -18.98 kcal Atomic # 7 Polarization: -31.94 SS G_CDS: 0.54 Total: -31.40 kcal Atomic # 8 Polarization: -11.08 SS G_CDS: 0.07 Total: -11.00 kcal Atomic # 14 Polarization: 18.48 SS G_CDS: -5.03 Total: 13.45 kcal Atomic # 17 Polarization: -2.30 SS G_CDS: -1.45 Total: -3.74 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -28.39 -8.89 -37.27 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000452647860.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.956 kcal (2) G-P(sol) polarization free energy of solvation -28.385 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.429 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.888 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.273 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.317 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds