Wall clock time and date at job start Tue Mar 31 2020 07:36:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52998 * 109.47061 * 2 1 4 4 N 1.46497 * 109.47296 * 180.02562 * 3 2 1 5 5 C 1.36719 * 119.99808 * 264.61950 * 4 3 2 6 6 H 1.07998 * 120.00101 * 141.67321 * 5 4 3 7 7 C 1.39125 * 119.99915 * 321.67271 * 5 4 3 8 8 N 1.31316 * 120.00147 * 339.37242 * 7 5 4 9 9 Si 1.86797 * 119.99756 * 159.37328 * 7 5 4 10 10 H 1.48500 * 109.47424 * 359.97438 * 9 7 5 11 11 H 1.48505 * 109.47228 * 120.00070 * 9 7 5 12 12 H 1.48500 * 109.46991 * 239.99799 * 9 7 5 13 13 C 1.34776 * 120.00316 * 84.61704 * 4 3 2 14 14 O 1.21760 * 119.99917 * 180.02562 * 13 4 3 15 15 C 1.46226 * 119.99877 * 359.97438 * 13 4 3 16 16 C 1.34976 * 120.00061 * 179.97438 * 15 13 4 17 17 C 1.47146 * 120.00220 * 180.02562 * 16 15 13 18 18 C 1.39905 * 120.16375 * 0.02562 * 17 16 15 19 19 C 1.37863 * 119.84742 * 179.97438 * 18 17 16 20 20 C 1.38411 * 120.18990 * 359.97438 * 19 18 17 21 21 C 1.38507 * 120.33795 * 359.72315 * 20 19 18 22 22 Cl 1.73606 * 119.92669 * 180.30630 * 21 20 19 23 23 C 1.38024 * 120.14797 * 0.55566 * 21 20 19 24 24 H 1.08998 * 109.47457 * 180.02562 * 1 2 3 25 25 H 1.09003 * 109.47440 * 300.00419 * 1 2 3 26 26 H 1.09003 * 109.47267 * 59.99999 * 1 2 3 27 27 H 1.08996 * 109.47042 * 240.00113 * 2 1 3 28 28 H 1.08994 * 109.46902 * 119.99530 * 2 1 3 29 29 H 1.09002 * 109.47500 * 60.00043 * 3 2 1 30 30 H 1.09003 * 109.47081 * 300.00115 * 3 2 1 31 31 H 0.96998 * 120.00362 * 180.02562 * 8 7 5 32 32 H 1.07997 * 120.00085 * 0.02562 * 15 13 4 33 33 H 1.07997 * 119.99853 * 0.02562 * 16 15 13 34 34 H 1.07998 * 120.07357 * 0.02562 * 18 17 16 35 35 H 1.07999 * 119.90439 * 180.02562 * 19 18 17 36 36 H 1.08001 * 119.82994 * 180.02562 * 20 19 18 37 37 H 1.07994 * 120.09209 * 179.71922 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 3.5049 1.4425 -0.0006 5 6 4.1890 1.5534 1.1779 6 1 5.0945 0.9854 1.3323 7 6 3.7186 2.3980 2.1785 8 7 2.8890 3.3712 1.8800 9 14 4.2671 2.1475 3.9464 10 1 5.1959 0.9910 4.0175 11 1 4.9599 3.3697 4.4277 12 1 3.0811 1.8823 4.7998 13 6 4.1784 1.3333 -1.1629 14 8 5.3960 1.3328 -1.1633 15 6 3.4468 1.2140 -2.4234 16 6 4.1212 1.1051 -3.5875 17 6 3.3850 0.9857 -4.8559 18 6 1.9860 0.9853 -4.8594 19 6 1.3028 0.8736 -6.0517 20 6 1.9971 0.7626 -7.2439 21 6 3.3822 0.7684 -7.2501 22 17 4.2421 0.6365 -8.7524 23 6 4.0802 0.8738 -6.0641 24 1 -0.3634 -1.0276 0.0005 25 1 -0.3634 0.5139 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 1.8933 -0.5138 -0.8900 28 1 1.8933 -0.5137 0.8900 29 1 1.6767 1.9564 0.8900 30 1 1.6766 1.9563 -0.8900 31 1 2.5613 3.9602 2.5775 32 1 2.3668 1.2140 -2.4230 33 1 5.2012 1.1056 -3.5879 34 1 1.4424 1.0731 -3.9303 35 1 0.2229 0.8736 -6.0555 36 1 1.4561 0.6758 -8.1746 37 1 5.1601 0.8737 -6.0695 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491238781.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:36:51 Heat of formation + Delta-G solvation = -6.024193 kcal Electronic energy + Delta-G solvation = -20381.244265 eV Core-core repulsion = 17149.558573 eV Total energy + Delta-G solvation = -3231.685692 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 293.092 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -39.40893 -38.55508 -36.60861 -35.38100 -33.67251 -32.79485 -31.28534 -30.95921 -29.35055 -26.11118 -25.06612 -23.49015 -22.69053 -21.16416 -20.60789 -18.20158 -17.44312 -16.86329 -16.17273 -15.47507 -15.33836 -14.91124 -14.36402 -13.88551 -13.84061 -13.76718 -13.57550 -13.40725 -12.96963 -12.58504 -11.99484 -11.78955 -11.73534 -11.65373 -11.47402 -11.40440 -11.19724 -11.00910 -10.87710 -10.70102 -10.40333 -10.35171 -10.01798 -9.99454 -9.03166 -8.90605 -8.49748 -8.06386 -7.52167 -6.44447 -4.02900 0.69751 1.13973 2.00400 2.30539 3.12345 3.21533 3.27968 3.69679 4.06777 4.40457 4.60493 4.71914 4.86944 4.95779 5.03786 5.15919 5.28539 5.43292 5.52356 5.63615 5.67988 5.73733 5.85487 6.00778 6.10948 6.14577 6.22676 6.27874 6.31870 6.39641 6.52855 6.70394 6.79910 6.88665 6.90432 7.16618 7.48693 8.19832 8.44331 9.11751 9.30386 9.96160 10.59140 Molecular weight = 293.09amu Principal moments of inertia in cm(-1) A = 0.025918 B = 0.003351 C = 0.003071 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1080.075585 B = 8353.849358 C = 9114.548792 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.142 4.142 3 C 0.103 3.897 4 N -0.424 5.424 5 C -0.306 4.306 6 H 0.094 0.906 7 C 0.039 3.961 8 N -0.860 5.860 9 Si 0.918 3.082 10 H -0.266 1.266 11 H -0.280 1.280 12 H -0.279 1.279 13 C 0.472 3.528 14 O -0.586 6.586 15 C -0.145 4.145 16 C -0.095 4.095 17 C -0.027 4.027 18 C -0.112 4.112 19 C -0.104 4.104 20 C -0.121 4.121 21 C -0.032 4.032 22 Cl -0.078 7.078 23 C -0.103 4.103 24 H 0.048 0.952 25 H 0.054 0.946 26 H 0.049 0.951 27 H 0.052 0.948 28 H 0.065 0.935 29 H 0.108 0.892 30 H 0.050 0.950 31 H 0.270 0.730 32 H 0.120 0.880 33 H 0.133 0.867 34 H 0.133 0.867 35 H 0.132 0.868 36 H 0.130 0.870 37 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.194 -4.879 -13.388 15.962 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.180 4.180 3 C -0.021 4.021 4 N -0.140 5.140 5 C -0.434 4.434 6 H 0.111 0.889 7 C -0.167 4.167 8 N -0.497 5.497 9 Si 0.745 3.255 10 H -0.190 1.190 11 H -0.206 1.206 12 H -0.205 1.205 13 C 0.263 3.737 14 O -0.472 6.472 15 C -0.166 4.166 16 C -0.116 4.116 17 C -0.028 4.028 18 C -0.130 4.130 19 C -0.122 4.122 20 C -0.140 4.140 21 C -0.058 4.058 22 Cl -0.049 7.049 23 C -0.122 4.122 24 H 0.067 0.933 25 H 0.073 0.927 26 H 0.068 0.932 27 H 0.071 0.929 28 H 0.084 0.916 29 H 0.125 0.875 30 H 0.068 0.932 31 H 0.080 0.920 32 H 0.137 0.863 33 H 0.151 0.849 34 H 0.151 0.849 35 H 0.150 0.850 36 H 0.148 0.852 37 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -6.631 -4.721 -13.349 15.635 hybrid contribution 0.072 0.046 0.695 0.701 sum -6.559 -4.674 -12.654 15.000 Atomic orbital electron populations 1.21683 0.96239 1.00802 1.01574 1.22014 0.94975 0.99040 1.02000 1.21654 0.82080 0.94557 1.03794 1.43413 1.04652 1.60868 1.05055 1.19516 1.09948 1.23871 0.90074 0.88866 1.25465 0.96974 0.93441 1.00816 1.69906 1.32168 1.13790 1.33848 0.85996 0.78709 0.78796 0.82045 1.18988 1.20593 1.20456 1.18207 0.87649 0.84073 0.83798 1.90649 1.13599 1.56091 1.86860 1.23499 0.99986 0.99118 0.94016 1.22058 1.00112 0.99695 0.89730 1.19090 0.92987 0.97819 0.92868 1.21582 0.93593 0.99098 0.98749 1.21020 1.00128 0.99495 0.91591 1.21068 0.91905 1.01870 0.99142 1.20797 0.92527 1.05584 0.86940 1.98362 1.77358 1.96552 1.32611 1.21243 1.00556 1.00386 0.90027 0.93322 0.92704 0.93169 0.92932 0.91590 0.87455 0.93177 0.92006 0.86258 0.84881 0.84888 0.85025 0.85232 0.84606 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.98 9.91 37.16 0.37 -1.61 16 2 C -0.14 -2.44 6.11 -26.73 -0.16 -2.61 16 3 C 0.10 2.15 4.56 -4.04 -0.02 2.13 16 4 N -0.42 -10.58 2.52 -116.46 -0.29 -10.87 16 5 C -0.31 -8.34 8.88 -15.04 -0.13 -8.47 16 6 H 0.09 2.67 7.78 -52.49 -0.41 2.26 16 7 C 0.04 1.00 4.91 -17.44 -0.09 0.91 16 8 N -0.86 -22.58 11.55 55.50 0.64 -21.94 16 9 Si 0.92 20.04 29.60 -169.99 -5.03 15.01 16 10 H -0.27 -5.79 7.11 56.52 0.40 -5.39 16 11 H -0.28 -6.15 7.11 56.52 0.40 -5.74 16 12 H -0.28 -5.88 7.11 56.52 0.40 -5.48 16 13 C 0.47 11.65 7.52 -13.05 -0.10 11.56 16 14 O -0.59 -16.59 16.11 5.13 0.08 -16.51 16 15 C -0.15 -2.77 8.12 -37.53 -0.30 -3.07 16 16 C -0.10 -1.63 9.46 -37.13 -0.35 -1.98 16 17 C -0.03 -0.39 5.87 -105.06 -0.62 -1.00 16 18 C -0.11 -1.39 9.41 -39.10 -0.37 -1.76 16 19 C -0.10 -1.08 10.03 -39.66 -0.40 -1.48 16 20 C -0.12 -1.27 9.82 -39.42 -0.39 -1.66 16 21 C -0.03 -0.38 6.31 -39.56 -0.25 -0.63 16 22 Cl -0.08 -0.84 28.95 -51.86 -1.50 -2.34 16 23 C -0.10 -1.34 9.58 -39.06 -0.37 -1.72 16 24 H 0.05 0.58 8.14 -51.93 -0.42 0.16 16 25 H 0.05 0.76 8.14 -51.93 -0.42 0.33 16 26 H 0.05 0.61 8.14 -51.93 -0.42 0.19 16 27 H 0.05 0.87 7.56 -51.93 -0.39 0.48 16 28 H 0.07 1.22 8.14 -51.93 -0.42 0.80 16 29 H 0.11 2.47 5.62 -51.93 -0.29 2.18 16 30 H 0.05 0.96 6.41 -51.93 -0.33 0.62 16 31 H 0.27 6.62 8.31 -40.82 -0.34 6.28 16 32 H 0.12 1.95 4.15 -52.49 -0.22 1.74 16 33 H 0.13 2.42 7.52 -52.49 -0.39 2.02 16 34 H 0.13 1.53 6.17 -52.49 -0.32 1.21 16 35 H 0.13 1.01 8.06 -52.49 -0.42 0.58 16 36 H 0.13 1.08 8.06 -52.49 -0.42 0.66 16 37 H 0.14 1.63 8.06 -52.49 -0.42 1.21 16 LS Contribution 330.79 15.07 4.98 4.98 Total: -1.00 -30.21 330.79 -8.75 -38.96 By element: Atomic # 1 Polarization: 8.56 SS G_CDS: -4.46 Total: 4.10 kcal Atomic # 6 Polarization: -8.21 SS G_CDS: -3.18 Total: -11.39 kcal Atomic # 7 Polarization: -33.16 SS G_CDS: 0.35 Total: -32.81 kcal Atomic # 8 Polarization: -16.59 SS G_CDS: 0.08 Total: -16.51 kcal Atomic # 14 Polarization: 20.04 SS G_CDS: -5.03 Total: 15.01 kcal Atomic # 17 Polarization: -0.84 SS G_CDS: -1.50 Total: -2.34 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -30.21 -8.75 -38.96 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491238781.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.935 kcal (2) G-P(sol) polarization free energy of solvation -30.206 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.730 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.754 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.960 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.024 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds