Wall clock time and date at job start Tue Mar 31 2020 07:36:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 C 1.52996 * 109.46846 * 2 1 4 4 N 1.46504 * 109.47142 * 180.02562 * 3 2 1 5 5 C 1.36719 * 119.99984 * 263.50567 * 4 3 2 6 6 H 1.08001 * 120.00476 * 139.19977 * 5 4 3 7 7 C 1.39121 * 119.99809 * 319.19103 * 5 4 3 8 8 N 1.31330 * 119.99418 * 165.09196 * 7 5 4 9 9 Si 1.86791 * 120.00190 * 345.08928 * 7 5 4 10 10 H 1.48504 * 109.47131 * 90.42734 * 9 7 5 11 11 H 1.48501 * 109.47211 * 210.42561 * 9 7 5 12 12 H 1.48501 * 109.47523 * 330.42654 * 9 7 5 13 13 C 1.34772 * 119.99798 * 83.50145 * 4 3 2 14 14 O 1.21771 * 119.99964 * 180.02562 * 13 4 3 15 15 C 1.46192 * 120.00205 * 0.02562 * 13 4 3 16 16 C 1.35023 * 120.00028 * 172.06144 * 15 13 4 17 17 C 1.47081 * 119.99841 * 349.05798 * 16 15 13 18 18 C 1.39912 * 120.18538 * 316.14361 * 17 16 15 19 19 C 1.37831 * 119.83800 * 179.67884 * 18 17 16 20 20 C 1.38464 * 120.20730 * 0.62065 * 19 18 17 21 21 C 1.38334 * 120.37258 * 359.67792 * 20 19 18 22 22 C 1.38063 * 120.16171 * 0.02562 * 21 20 19 23 23 Cl 1.73597 * 120.10885 * 180.02562 * 22 21 20 24 24 H 1.08998 * 109.47136 * 179.97438 * 1 2 3 25 25 H 1.09001 * 109.46915 * 299.99836 * 1 2 3 26 26 H 1.09001 * 109.47048 * 59.99430 * 1 2 3 27 27 H 1.09004 * 109.46891 * 240.00930 * 2 1 3 28 28 H 1.08989 * 109.47318 * 120.00344 * 2 1 3 29 29 H 1.09001 * 109.47230 * 60.00356 * 3 2 1 30 30 H 1.09001 * 109.47762 * 300.00133 * 3 2 1 31 31 H 0.97004 * 119.99417 * 180.02562 * 8 7 5 32 32 H 1.07995 * 119.99649 * 351.78472 * 15 13 4 33 33 H 1.07994 * 119.99852 * 169.06239 * 16 15 13 34 34 H 1.08004 * 120.08317 * 0.02562 * 18 17 16 35 35 H 1.07999 * 119.89576 * 180.29664 * 19 18 17 36 36 H 1.07998 * 119.81560 * 179.69595 * 20 19 18 37 37 H 1.08001 * 119.92153 * 180.02562 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 3.5050 1.4426 -0.0006 5 6 4.1891 1.5763 1.1755 6 1 5.0724 0.9820 1.3572 7 6 3.7475 2.4782 2.1384 8 7 4.2100 2.4074 3.3655 9 14 2.4969 3.7898 1.6857 10 1 1.1261 3.2675 1.9169 11 1 2.7162 4.9940 2.5266 12 1 2.6542 4.1507 0.2538 13 6 4.1784 1.3107 -1.1606 14 8 5.3961 1.3103 -1.1611 15 6 3.4469 1.1681 -2.4183 16 6 4.1119 1.1971 -3.5931 17 6 5.5234 1.6090 -3.6292 18 6 5.9504 2.7216 -2.8962 19 6 7.2761 3.0973 -2.9299 20 6 8.1828 2.3851 -3.6966 21 6 7.7688 1.2874 -4.4296 22 6 6.4457 0.8938 -4.4022 23 17 5.9278 -0.4843 -5.3220 24 1 -0.3633 -1.0276 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5139 -0.8899 27 1 1.8934 -0.5137 -0.8901 28 1 1.8934 -0.5138 0.8898 29 1 1.6767 1.9563 0.8900 30 1 1.6767 1.9564 -0.8899 31 1 3.9018 3.0360 4.0369 32 1 2.3752 1.0351 -2.4075 33 1 3.6073 0.9178 -4.5062 34 1 5.2441 3.2813 -2.3009 35 1 7.6077 3.9531 -2.3607 36 1 9.2191 2.6880 -3.7223 37 1 8.4823 0.7368 -5.0248 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491494477.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:36:54 Heat of formation + Delta-G solvation = 17.826081 kcal Electronic energy + Delta-G solvation = -21328.189263 eV Core-core repulsion = 18097.537796 eV Total energy + Delta-G solvation = -3230.651467 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 293.092 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -39.49860 -38.36659 -36.17627 -35.62869 -33.52895 -32.74124 -31.62053 -30.32860 -29.31269 -26.12822 -25.37312 -23.15615 -22.10883 -21.46817 -20.80912 -18.20776 -17.15407 -16.91532 -16.34492 -15.65716 -15.04626 -14.80166 -14.33954 -13.98624 -13.70699 -13.63714 -13.37128 -13.15910 -12.79382 -12.43574 -12.32654 -12.30053 -11.90244 -11.55619 -11.35413 -11.18662 -11.10365 -10.98259 -10.93728 -10.56016 -10.45774 -10.07324 -9.91748 -9.56926 -9.10010 -8.72690 -8.29045 -7.74894 -7.59359 -6.45491 -4.03986 1.10425 1.68608 2.26732 2.42106 2.97158 3.15926 3.17622 4.05404 4.12054 4.22502 4.41362 4.92326 5.01127 5.15519 5.30290 5.32853 5.45254 5.45759 5.59793 5.67906 5.72542 5.82150 5.84394 6.02738 6.06579 6.13712 6.24712 6.28469 6.43663 6.50457 6.51545 6.66919 6.71762 6.82884 6.95656 7.21498 7.51780 8.25264 8.48036 8.91433 9.23966 9.75921 10.65926 Molecular weight = 293.09amu Principal moments of inertia in cm(-1) A = 0.017789 B = 0.005564 C = 0.004623 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1573.628145 B = 5031.242581 C = 6055.058291 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.138 4.138 3 C 0.083 3.917 4 N -0.453 5.453 5 C -0.306 4.306 6 H 0.106 0.894 7 C 0.059 3.941 8 N -0.863 5.863 9 Si 0.882 3.118 10 H -0.273 1.273 11 H -0.288 1.288 12 H -0.263 1.263 13 C 0.479 3.521 14 O -0.551 6.551 15 C -0.174 4.174 16 C -0.075 4.075 17 C -0.036 4.036 18 C -0.018 4.018 19 C -0.127 4.127 20 C -0.106 4.106 21 C -0.131 4.131 22 C -0.024 4.024 23 Cl -0.085 7.085 24 H 0.053 0.947 25 H 0.053 0.947 26 H 0.051 0.949 27 H 0.061 0.939 28 H 0.073 0.927 29 H 0.076 0.924 30 H 0.062 0.938 31 H 0.275 0.725 32 H 0.124 0.876 33 H 0.128 0.872 34 H 0.124 0.876 35 H 0.122 0.878 36 H 0.122 0.878 37 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.674 -0.397 -13.593 13.859 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.177 4.177 3 C -0.040 4.040 4 N -0.172 5.172 5 C -0.434 4.434 6 H 0.123 0.877 7 C -0.148 4.148 8 N -0.499 5.499 9 Si 0.710 3.290 10 H -0.200 1.200 11 H -0.214 1.214 12 H -0.188 1.188 13 C 0.270 3.730 14 O -0.434 6.434 15 C -0.195 4.195 16 C -0.096 4.096 17 C -0.037 4.037 18 C -0.037 4.037 19 C -0.145 4.145 20 C -0.125 4.125 21 C -0.150 4.150 22 C -0.051 4.051 23 Cl -0.056 7.056 24 H 0.072 0.928 25 H 0.073 0.927 26 H 0.070 0.930 27 H 0.080 0.920 28 H 0.092 0.908 29 H 0.094 0.906 30 H 0.080 0.920 31 H 0.086 0.914 32 H 0.142 0.858 33 H 0.146 0.854 34 H 0.142 0.858 35 H 0.140 0.860 36 H 0.140 0.860 37 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges -2.107 -0.440 -13.399 13.571 hybrid contribution -0.911 0.431 0.108 1.013 sum -3.018 -0.008 -13.291 13.629 Atomic orbital electron populations 1.21736 0.96062 1.01378 1.01559 1.21935 0.95064 0.97615 1.03040 1.22048 0.83438 0.96883 1.01634 1.43716 1.03662 1.63312 1.06509 1.19065 1.11962 1.21848 0.90515 0.87692 1.25463 0.97478 0.96894 0.94935 1.69655 1.42885 1.35903 1.01435 0.86905 0.80701 0.81760 0.79586 1.19985 1.21433 1.18766 1.18166 0.87833 0.83494 0.83518 1.90752 1.12996 1.53764 1.85885 1.23436 0.99837 1.02597 0.93662 1.22045 0.92444 0.97575 0.97508 1.18656 0.92970 0.95480 0.96564 1.21109 0.96142 0.94052 0.92364 1.21010 0.93371 1.00718 0.99405 1.21009 0.99329 0.95173 0.96966 1.20716 0.93651 0.98537 1.02063 1.20941 0.94348 0.91148 0.98620 1.98319 1.91236 1.43194 1.72825 0.92774 0.92747 0.93018 0.91985 0.90781 0.90614 0.92000 0.91440 0.85774 0.85394 0.85849 0.85982 0.85958 0.85799 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.96 9.91 37.16 0.37 -1.59 16 2 C -0.14 -2.29 6.02 -26.73 -0.16 -2.45 16 3 C 0.08 1.62 3.50 -4.04 -0.01 1.60 16 4 N -0.45 -10.63 2.16 -116.47 -0.25 -10.88 16 5 C -0.31 -8.43 9.35 -15.05 -0.14 -8.57 16 6 H 0.11 3.29 7.97 -52.49 -0.42 2.87 16 7 C 0.06 1.58 5.37 -17.44 -0.09 1.49 16 8 N -0.86 -24.51 13.95 55.50 0.77 -23.74 16 9 Si 0.88 20.08 24.86 -169.99 -4.23 15.85 16 10 H -0.27 -5.75 6.56 56.52 0.37 -5.38 16 11 H -0.29 -6.59 7.11 56.52 0.40 -6.19 16 12 H -0.26 -5.89 7.11 56.52 0.40 -5.49 16 13 C 0.48 10.86 6.51 -13.07 -0.09 10.77 16 14 O -0.55 -14.10 12.15 5.13 0.06 -14.04 16 15 C -0.17 -3.09 8.57 -37.53 -0.32 -3.41 16 16 C -0.08 -1.23 8.95 -37.14 -0.33 -1.56 16 17 C -0.04 -0.64 4.52 -105.03 -0.48 -1.11 16 18 C -0.02 -0.33 6.63 -39.10 -0.26 -0.59 16 19 C -0.13 -2.09 10.03 -39.65 -0.40 -2.49 16 20 C -0.11 -1.56 10.04 -39.46 -0.40 -1.96 16 21 C -0.13 -1.95 9.82 -39.61 -0.39 -2.34 16 22 C -0.02 -0.39 6.36 -38.99 -0.25 -0.64 16 23 Cl -0.08 -1.22 27.95 -51.86 -1.45 -2.67 16 24 H 0.05 0.62 8.14 -51.93 -0.42 0.20 16 25 H 0.05 0.72 8.14 -51.93 -0.42 0.30 16 26 H 0.05 0.59 8.14 -51.93 -0.42 0.17 16 27 H 0.06 0.98 7.26 -51.93 -0.38 0.60 16 28 H 0.07 1.36 8.14 -51.94 -0.42 0.94 16 29 H 0.08 1.57 3.37 -51.93 -0.18 1.40 16 30 H 0.06 1.04 6.61 -51.93 -0.34 0.70 16 31 H 0.28 7.24 8.31 -40.82 -0.34 6.90 16 32 H 0.12 1.84 5.96 -52.49 -0.31 1.52 16 33 H 0.13 1.70 7.91 -52.49 -0.42 1.29 16 34 H 0.12 2.42 7.04 -52.48 -0.37 2.05 16 35 H 0.12 1.79 8.06 -52.49 -0.42 1.37 16 36 H 0.12 1.42 8.06 -52.49 -0.42 0.99 16 37 H 0.12 1.54 8.06 -52.49 -0.42 1.12 16 LS Contribution 318.59 15.07 4.80 4.80 Total: -1.00 -30.39 318.59 -7.77 -38.16 By element: Atomic # 1 Polarization: 9.90 SS G_CDS: -4.54 Total: 5.37 kcal Atomic # 6 Polarization: -9.91 SS G_CDS: -2.94 Total: -12.86 kcal Atomic # 7 Polarization: -35.14 SS G_CDS: 0.52 Total: -34.62 kcal Atomic # 8 Polarization: -14.10 SS G_CDS: 0.06 Total: -14.04 kcal Atomic # 14 Polarization: 20.08 SS G_CDS: -4.23 Total: 15.85 kcal Atomic # 17 Polarization: -1.22 SS G_CDS: -1.45 Total: -2.67 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -30.39 -7.77 -38.16 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491494477.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.991 kcal (2) G-P(sol) polarization free energy of solvation -30.395 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.596 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.770 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.165 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.826 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds