Wall clock time and date at job start Tue Mar 31 2020 07:30:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52991 * 1 3 3 C 1.53001 * 109.47124 * 2 1 4 4 H 1.08996 * 109.47272 * 304.99889 * 3 2 1 5 5 C 1.50698 * 109.47448 * 184.99913 * 3 2 1 6 6 H 1.08005 * 120.00065 * 240.00511 * 5 3 2 7 7 C 1.37875 * 119.99949 * 59.72232 * 5 3 2 8 8 N 1.31511 * 120.00208 * 0.27530 * 7 5 3 9 9 Si 1.86804 * 120.00203 * 180.27860 * 7 5 3 10 10 H 1.48502 * 109.47071 * 89.99967 * 9 7 5 11 11 H 1.48497 * 109.47267 * 209.99939 * 9 7 5 12 12 H 1.48507 * 109.46844 * 330.00191 * 9 7 5 13 13 N 1.46501 * 109.47346 * 64.99563 * 3 2 1 14 14 C 1.34775 * 120.00547 * 275.00523 * 13 3 2 15 15 O 1.21703 * 119.99492 * 359.97438 * 14 13 3 16 16 C 1.46377 * 120.00225 * 179.97438 * 14 13 3 17 17 C 1.34857 * 119.99803 * 173.21426 * 16 14 13 18 18 C 1.47157 * 119.99741 * 349.03795 * 17 16 14 19 19 C 1.39864 * 120.15752 * 316.09863 * 18 17 16 20 20 C 1.37841 * 119.83851 * 179.79071 * 19 18 17 21 21 C 1.38550 * 120.15670 * 0.49407 * 20 19 18 22 22 Cl 1.73593 * 119.84050 * 179.76166 * 21 20 19 23 23 C 1.38549 * 120.31644 * 359.73942 * 21 20 19 24 24 C 1.37840 * 120.16146 * 0.02562 * 23 21 20 25 25 H 1.09009 * 109.47123 * 60.00255 * 1 2 3 26 26 H 1.08998 * 109.47087 * 179.97438 * 1 2 3 27 27 H 1.09001 * 109.47646 * 300.00338 * 1 2 3 28 28 H 1.08996 * 109.47616 * 240.00156 * 2 1 3 29 29 H 1.08995 * 109.47082 * 119.99630 * 2 1 3 30 30 H 0.96995 * 120.00510 * 179.97438 * 8 7 5 31 31 H 0.97003 * 119.99583 * 94.99943 * 13 3 2 32 32 H 1.08003 * 120.00321 * 353.21755 * 16 14 13 33 33 H 1.08001 * 119.99688 * 169.03373 * 17 16 14 34 34 H 1.07997 * 120.07988 * 0.02602 * 19 18 17 35 35 H 1.07991 * 119.92115 * 180.20693 * 20 19 18 36 36 H 1.07999 * 119.92192 * 179.97438 * 23 21 20 37 37 H 1.07997 * 120.08197 * 179.97438 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 1 1.6053 1.9815 -0.8418 5 6 3.5418 1.4444 -0.1238 6 1 4.1471 1.8889 0.6524 7 6 4.1434 0.8734 -1.2252 8 7 3.4065 0.3320 -2.1703 9 14 6.0054 0.8688 -1.3750 10 1 6.5493 -0.3631 -0.7490 11 1 6.3867 0.9049 -2.8097 12 1 6.5605 2.0611 -0.6851 13 7 1.6523 2.0976 1.2517 14 6 0.4350 2.6644 1.3669 15 8 -0.3421 2.6325 0.4308 16 6 0.0475 3.3184 2.6179 17 6 -1.1120 4.0032 2.6897 18 6 -1.8686 4.2997 1.4628 19 6 -1.2031 4.7524 0.3190 20 6 -1.9177 5.0240 -0.8279 21 6 -3.2932 4.8593 -0.8464 22 17 -4.1858 5.2097 -2.2934 23 6 -3.9597 4.4158 0.2844 24 6 -3.2575 4.1357 1.4370 25 1 -0.3634 0.5138 -0.8901 26 1 -0.3633 -1.0276 -0.0005 27 1 -0.3634 0.5139 0.8899 28 1 1.8933 -0.5138 -0.8899 29 1 1.8932 -0.5138 0.8900 30 1 3.8296 -0.0694 -2.9453 31 1 2.2718 2.1232 1.9977 32 1 0.6903 3.2527 3.4833 33 1 -1.4854 4.3338 3.6477 34 1 -0.1314 4.8852 0.3333 35 1 -1.4047 5.3704 -1.7129 36 1 -5.0321 4.2901 0.2631 37 1 -3.7783 3.7905 2.3178 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000492557398.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:30:03 Heat of formation + Delta-G solvation = -1.179319 kcal Electronic energy + Delta-G solvation = -21006.901899 eV Core-core repulsion = 17775.426296 eV Total energy + Delta-G solvation = -3231.475603 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 293.092 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -39.71318 -38.43467 -36.37899 -35.19464 -33.35784 -32.40163 -30.97021 -30.86493 -29.18808 -26.99465 -24.02139 -22.89171 -22.46731 -21.37895 -19.53654 -19.11078 -17.51414 -16.58871 -16.08654 -15.39366 -15.21227 -14.82485 -14.43278 -14.04204 -13.80313 -13.38786 -13.29930 -13.13294 -12.65952 -12.55180 -12.02731 -11.59843 -11.50257 -11.37844 -11.25773 -11.18901 -10.98650 -10.83026 -10.66534 -10.32057 -10.17454 -9.65492 -9.59712 -9.14658 -9.06339 -8.70059 -8.50540 -7.87023 -7.70316 -6.13857 -4.23623 0.84487 1.60198 1.98004 2.28791 3.22639 3.30003 3.31665 3.92168 3.96528 4.15349 4.39945 4.81831 4.96356 5.05487 5.17398 5.29940 5.47507 5.55686 5.66754 5.89227 6.08350 6.15851 6.30616 6.39977 6.44198 6.47178 6.53690 6.67206 6.76258 7.00732 7.04708 7.21150 7.36843 7.44899 7.61162 7.73387 7.89160 8.17380 8.66523 8.76729 9.13734 9.44210 10.91257 Molecular weight = 293.09amu Principal moments of inertia in cm(-1) A = 0.018700 B = 0.004146 C = 0.003769 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1496.959180 B = 6752.273895 C = 7427.777776 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.127 4.127 3 C 0.271 3.729 4 H 0.050 0.950 5 C -0.536 4.536 6 H 0.060 0.940 7 C 0.067 3.933 8 N -0.881 5.881 9 Si 0.900 3.100 10 H -0.280 1.280 11 H -0.285 1.285 12 H -0.274 1.274 13 N -0.700 5.700 14 C 0.519 3.481 15 O -0.535 6.535 16 C -0.191 4.191 17 C -0.053 4.053 18 C -0.054 4.054 19 C -0.016 4.016 20 C -0.121 4.121 21 C -0.025 4.025 22 Cl -0.085 7.085 23 C -0.128 4.128 24 C -0.095 4.095 25 H 0.049 0.951 26 H 0.020 0.980 27 H 0.039 0.961 28 H 0.098 0.902 29 H 0.029 0.971 30 H 0.264 0.736 31 H 0.388 0.612 32 H 0.128 0.872 33 H 0.131 0.869 34 H 0.125 0.875 35 H 0.128 0.872 36 H 0.126 0.874 37 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.617 8.240 8.415 15.857 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.192 4.192 2 C -0.166 4.166 3 C 0.169 3.831 4 H 0.068 0.932 5 C -0.574 4.574 6 H 0.079 0.921 7 C -0.136 4.136 8 N -0.519 5.519 9 Si 0.727 3.273 10 H -0.206 1.206 11 H -0.211 1.211 12 H -0.199 1.199 13 N -0.346 5.346 14 C 0.306 3.694 15 O -0.416 6.416 16 C -0.212 4.212 17 C -0.073 4.073 18 C -0.054 4.054 19 C -0.035 4.035 20 C -0.140 4.140 21 C -0.051 4.051 22 Cl -0.057 7.057 23 C -0.147 4.147 24 C -0.113 4.113 25 H 0.068 0.932 26 H 0.039 0.961 27 H 0.058 0.942 28 H 0.116 0.884 29 H 0.048 0.952 30 H 0.074 0.926 31 H 0.220 0.780 32 H 0.146 0.854 33 H 0.149 0.851 34 H 0.142 0.858 35 H 0.146 0.854 36 H 0.144 0.856 37 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -11.183 8.116 7.390 15.670 hybrid contribution 1.338 -0.276 0.164 1.377 sum -9.844 7.840 7.554 14.678 Atomic orbital electron populations 1.21821 0.98231 0.97917 1.01279 1.21927 0.92667 0.99810 1.02184 1.18773 0.94109 0.89189 0.81017 0.93241 1.21236 0.90770 1.38977 1.06417 0.92150 1.24876 0.98536 0.94791 0.95387 1.69889 1.35116 1.37436 1.09430 0.86479 0.84971 0.78438 0.77400 1.20561 1.21066 1.19868 1.46531 1.14345 1.55288 1.18445 1.18334 0.82967 0.80312 0.87828 1.90856 1.50711 1.59879 1.40132 1.23348 0.97976 1.00720 0.99123 1.22208 0.93257 0.95324 0.96468 1.18914 0.92979 0.99511 0.94016 1.21062 0.99063 0.92557 0.90771 1.20835 0.91704 1.02266 0.99151 1.20959 0.92408 1.03860 0.87897 1.98343 1.75688 1.93587 1.38054 1.20737 0.99936 1.02010 0.91980 1.21045 0.92967 0.99651 0.97657 0.93177 0.96075 0.94199 0.88357 0.95182 0.92554 0.78006 0.85421 0.85084 0.85751 0.85376 0.85587 0.85609 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -3.01 8.51 37.15 0.32 -2.70 16 2 C -0.13 -3.06 5.45 -26.74 -0.15 -3.20 16 3 C 0.27 6.60 2.24 -69.08 -0.16 6.44 16 4 H 0.05 1.40 7.58 -51.93 -0.39 1.01 16 5 C -0.54 -13.82 8.73 -34.44 -0.30 -14.13 16 6 H 0.06 1.49 7.74 -52.48 -0.41 1.09 16 7 C 0.07 1.78 5.29 -17.82 -0.09 1.69 16 8 N -0.88 -24.45 11.28 55.43 0.63 -23.83 16 9 Si 0.90 20.34 29.54 -169.99 -5.02 15.32 16 10 H -0.28 -6.26 7.11 56.52 0.40 -5.86 16 11 H -0.28 -6.48 7.11 56.52 0.40 -6.07 16 12 H -0.27 -6.09 7.11 56.52 0.40 -5.69 16 13 N -0.70 -13.75 5.02 -56.34 -0.28 -14.04 16 14 C 0.52 9.49 5.36 -12.99 -0.07 9.43 16 15 O -0.54 -11.25 9.29 5.19 0.05 -11.21 16 16 C -0.19 -2.57 9.91 -37.51 -0.37 -2.94 16 17 C -0.05 -0.64 9.81 -37.16 -0.36 -1.00 16 18 C -0.05 -0.77 4.53 -105.06 -0.48 -1.24 16 19 C -0.02 -0.25 6.60 -39.12 -0.26 -0.51 16 20 C -0.12 -1.87 9.81 -39.61 -0.39 -2.26 16 21 C -0.02 -0.36 6.33 -39.35 -0.25 -0.61 16 22 Cl -0.09 -1.14 28.95 -51.86 -1.50 -2.64 16 23 C -0.13 -1.68 9.81 -39.61 -0.39 -2.07 16 24 C -0.09 -1.22 9.79 -39.11 -0.38 -1.60 16 25 H 0.05 1.20 7.84 -51.92 -0.41 0.79 16 26 H 0.02 0.42 8.14 -51.93 -0.42 0.00 16 27 H 0.04 0.86 5.64 -51.93 -0.29 0.57 16 28 H 0.10 2.63 5.94 -51.93 -0.31 2.33 16 29 H 0.03 0.69 8.14 -51.93 -0.42 0.27 16 30 H 0.26 7.00 8.31 -40.82 -0.34 6.66 16 31 H 0.39 6.64 8.52 -40.82 -0.35 6.29 16 32 H 0.13 1.33 8.06 -52.48 -0.42 0.91 16 33 H 0.13 1.11 8.06 -52.49 -0.42 0.69 16 34 H 0.12 2.05 7.03 -52.49 -0.37 1.68 16 35 H 0.13 1.89 8.06 -52.49 -0.42 1.46 16 36 H 0.13 1.38 8.06 -52.49 -0.42 0.96 16 37 H 0.13 1.27 8.06 -52.49 -0.42 0.84 16 LS Contribution 322.73 15.07 4.86 4.86 Total: -1.00 -29.11 322.73 -9.22 -38.33 By element: Atomic # 1 Polarization: 12.53 SS G_CDS: -4.62 Total: 7.91 kcal Atomic # 6 Polarization: -11.39 SS G_CDS: -3.33 Total: -14.71 kcal Atomic # 7 Polarization: -38.20 SS G_CDS: 0.34 Total: -37.86 kcal Atomic # 8 Polarization: -11.25 SS G_CDS: 0.05 Total: -11.21 kcal Atomic # 14 Polarization: 20.34 SS G_CDS: -5.02 Total: 15.32 kcal Atomic # 17 Polarization: -1.14 SS G_CDS: -1.50 Total: -2.64 kcal Total LS contribution 4.86 Total: 4.86 kcal Total: -29.11 -9.22 -38.33 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000492557398.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.149 kcal (2) G-P(sol) polarization free energy of solvation -29.112 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.036 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.216 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.328 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.179 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds