Wall clock time and date at job start Tue Mar 31 2020 06:38:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.53001 * 115.55143 * 2 1 4 4 C 1.50696 * 109.46935 * 278.27497 * 3 2 1 5 5 O 1.21289 * 120.00235 * 4.61951 * 4 3 2 6 6 N 1.34777 * 119.99949 * 184.61657 * 4 3 2 7 7 C 1.37126 * 120.00145 * 5.08751 * 6 4 3 8 8 H 1.08007 * 119.99829 * 24.02481 * 7 6 4 9 9 C 1.38885 * 120.00395 * 204.02451 * 7 6 4 10 10 N 1.31423 * 119.99718 * 12.93160 * 9 7 6 11 11 Si 1.86800 * 120.00100 * 192.93380 * 9 7 6 12 12 H 1.48500 * 109.47260 * 59.99996 * 11 9 7 13 13 H 1.48499 * 109.47060 * 180.02562 * 11 9 7 14 14 H 1.48498 * 109.47161 * 299.99981 * 11 9 7 15 15 C 1.39813 * 119.99898 * 185.09025 * 6 4 3 16 16 C 1.38959 * 120.06745 * 79.78828 * 15 6 4 17 17 C 1.38067 * 119.93456 * 179.72001 * 16 15 6 18 18 C 1.38414 * 120.06446 * 0.25883 * 17 16 15 19 19 Cl 1.73606 * 119.93455 * 180.02562 * 18 17 16 20 20 C 1.38421 * 120.13318 * 359.97438 * 18 17 16 21 21 C 1.38069 * 120.06190 * 0.02562 * 20 18 17 22 22 C 1.52998 * 117.51614 * 145.70108 * 2 1 3 23 23 C 1.52998 * 117.49511 * 214.33253 * 2 1 3 24 24 H 1.09001 * 109.47248 * 55.39123 * 1 2 3 25 25 H 1.08999 * 109.47276 * 175.39991 * 1 2 3 26 26 H 1.09012 * 109.46580 * 295.39818 * 1 2 3 27 27 H 1.08996 * 109.46911 * 158.27668 * 3 2 1 28 28 H 1.08997 * 109.46801 * 38.27168 * 3 2 1 29 29 H 0.97002 * 119.99533 * 184.91637 * 10 9 7 30 30 H 1.07998 * 120.03265 * 359.97438 * 16 15 6 31 31 H 1.08004 * 119.96911 * 180.27727 * 17 16 15 32 32 H 1.07997 * 119.96590 * 180.02562 * 20 18 17 33 33 H 1.07997 * 120.03225 * 179.97438 * 21 20 18 34 34 H 1.08995 * 117.49954 * 214.96506 * 22 2 1 35 35 H 1.09005 * 117.50070 * 359.97438 * 22 2 1 36 36 H 1.09004 * 117.49671 * 359.97339 * 23 2 1 37 37 H 1.08998 * 117.49878 * 144.99759 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.1900 1.3804 0.0000 4 6 2.2221 1.9217 -1.4060 5 8 1.6885 1.3068 -2.3050 6 7 2.8439 3.0893 -1.6645 7 6 3.5359 3.7323 -0.6706 8 1 3.9180 3.1727 0.1705 9 6 3.7456 5.1032 -0.7454 10 7 3.0771 5.8235 -1.6180 11 14 4.9777 5.9232 0.3943 12 1 6.3251 5.3413 0.1677 13 1 5.0146 7.3815 0.1165 14 1 4.5726 5.6987 1.8052 15 6 2.7831 3.6448 -2.9461 16 6 1.6530 4.3463 -3.3480 17 6 1.5982 4.8987 -4.6121 18 6 2.6655 4.7497 -5.4808 19 17 2.5934 5.4463 -7.0693 20 6 3.7907 4.0473 -5.0850 21 6 3.8512 3.4927 -3.8221 22 6 2.2369 -1.1210 0.7646 23 6 2.2364 -1.1207 -0.7654 24 1 -0.3634 0.5837 -0.8458 25 1 -0.3634 -1.0243 -0.0824 26 1 -0.3633 0.4408 0.9285 27 1 3.2080 1.2964 0.3804 28 1 1.6188 2.0561 0.6365 29 1 3.2742 6.7678 -1.7198 30 1 0.8199 4.4628 -2.6707 31 1 0.7219 5.4479 -4.9235 32 1 4.6221 3.9330 -5.7648 33 1 4.7291 2.9444 -3.5139 34 1 3.1721 -0.8751 1.2676 35 1 1.6119 -1.8585 1.2683 36 1 1.6111 -1.8582 -1.2686 37 1 3.1713 -0.8747 -1.2690 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000592653377.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:38:41 Heat of formation + Delta-G solvation = 11.179919 kcal Electronic energy + Delta-G solvation = -21415.332819 eV Core-core repulsion = 18184.393153 eV Total energy + Delta-G solvation = -3230.939666 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 293.092 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -39.61016 -38.17098 -36.83796 -35.75856 -34.60152 -31.71053 -30.20250 -29.76411 -28.41046 -27.23398 -24.96898 -22.11433 -21.96915 -21.87160 -19.60480 -18.65283 -17.48658 -16.25278 -15.94680 -15.28761 -14.85437 -14.72926 -14.32973 -14.12123 -13.50668 -13.26849 -13.02119 -12.69136 -12.61035 -12.32429 -11.94760 -11.83639 -11.50203 -11.33785 -11.18405 -11.12071 -10.93351 -10.80220 -10.70614 -10.53521 -10.39467 -10.17027 -9.81186 -9.42381 -9.33369 -8.53157 -8.13716 -8.07614 -7.64756 -6.31149 -4.16253 2.09165 2.26113 2.77745 3.06407 3.15506 3.16417 3.73785 3.95307 4.13388 4.58864 4.66259 4.98905 5.10492 5.23971 5.34788 5.52740 5.62869 5.64402 5.92544 5.99467 6.04211 6.19044 6.21051 6.28089 6.30306 6.31863 6.39704 6.48582 6.51226 6.61851 6.72852 6.79345 6.91628 7.04928 7.27525 7.46762 7.55612 7.79600 8.33032 8.94983 9.29693 9.74172 10.55166 Molecular weight = 293.09amu Principal moments of inertia in cm(-1) A = 0.012765 B = 0.006159 C = 0.004546 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2192.970328 B = 4544.865353 C = 6157.146460 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.108 4.108 2 C -0.102 4.102 3 C -0.083 4.083 4 C 0.476 3.524 5 O -0.583 6.583 6 N -0.423 5.423 7 C -0.348 4.348 8 H 0.100 0.900 9 C 0.045 3.955 10 N -0.855 5.855 11 Si 0.918 3.082 12 H -0.273 1.273 13 H -0.283 1.283 14 H -0.272 1.272 15 C 0.238 3.762 16 C -0.041 4.041 17 C -0.115 4.115 18 C -0.051 4.051 19 Cl -0.104 7.104 20 C -0.115 4.115 21 C -0.118 4.118 22 C -0.187 4.187 23 C -0.154 4.154 24 H 0.067 0.933 25 H 0.048 0.952 26 H 0.052 0.948 27 H 0.082 0.918 28 H 0.090 0.910 29 H 0.272 0.728 30 H 0.117 0.883 31 H 0.118 0.882 32 H 0.118 0.882 33 H 0.118 0.882 34 H 0.089 0.911 35 H 0.088 0.912 36 H 0.087 0.913 37 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.676 -4.226 0.381 4.296 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C -0.102 4.102 3 C -0.122 4.122 4 C 0.266 3.734 5 O -0.466 6.466 6 N -0.141 5.141 7 C -0.474 4.474 8 H 0.117 0.883 9 C -0.162 4.162 10 N -0.490 5.490 11 Si 0.744 3.256 12 H -0.199 1.199 13 H -0.208 1.208 14 H -0.197 1.197 15 C 0.147 3.853 16 C -0.060 4.060 17 C -0.134 4.134 18 C -0.077 4.077 19 Cl -0.076 7.076 20 C -0.134 4.134 21 C -0.138 4.138 22 C -0.225 4.225 23 C -0.191 4.191 24 H 0.086 0.914 25 H 0.067 0.933 26 H 0.071 0.929 27 H 0.100 0.900 28 H 0.109 0.891 29 H 0.083 0.917 30 H 0.135 0.865 31 H 0.136 0.864 32 H 0.136 0.864 33 H 0.136 0.864 34 H 0.108 0.892 35 H 0.106 0.894 36 H 0.105 0.895 37 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -1.011 -4.232 -0.201 4.356 hybrid contribution 0.872 0.916 0.509 1.363 sum -0.139 -3.317 0.308 3.334 Atomic orbital electron populations 1.21250 0.92404 1.01130 1.01748 1.21106 0.94606 0.90326 1.04183 1.20938 1.01356 0.94077 0.95871 1.20309 0.80230 0.82357 0.90492 1.90580 1.48778 1.60050 1.47199 1.41315 1.46334 1.19751 1.06675 1.19492 1.34006 0.90656 1.03216 0.88263 1.25283 0.97077 0.96194 0.97629 1.69922 1.36394 1.08146 1.34560 0.86140 0.80813 0.78363 0.80279 1.19857 1.20805 1.19698 1.17308 0.92275 0.91141 0.84554 1.20810 0.97909 0.93737 0.93591 1.20609 0.97489 1.01761 0.93555 1.20607 0.97590 1.03322 0.86162 1.98290 1.98626 1.84081 1.26604 1.20563 0.96732 0.99534 0.96563 1.21032 0.99009 1.00955 0.92759 1.23141 1.02260 1.01884 0.95166 1.22786 1.02438 1.01079 0.92794 0.91439 0.93288 0.92915 0.90013 0.89142 0.91658 0.86486 0.86367 0.86374 0.86403 0.89212 0.89401 0.89455 0.89273 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.64 9.68 37.16 0.36 -1.28 16 2 C -0.10 -1.66 1.60 -154.51 -0.25 -1.91 16 3 C -0.08 -1.52 4.44 -27.88 -0.12 -1.65 16 4 C 0.48 10.70 7.45 -10.99 -0.08 10.62 16 5 O -0.58 -14.25 15.01 5.55 0.08 -14.17 16 6 N -0.42 -10.03 2.65 -58.97 -0.16 -10.18 16 7 C -0.35 -8.23 9.01 -14.94 -0.13 -8.36 16 8 H 0.10 2.20 6.50 -52.48 -0.34 1.86 16 9 C 0.05 1.08 5.25 -17.49 -0.09 0.99 16 10 N -0.85 -21.26 10.24 55.49 0.57 -20.69 16 11 Si 0.92 18.76 29.57 -169.99 -5.03 13.74 16 12 H -0.27 -5.58 7.11 56.52 0.40 -5.18 16 13 H -0.28 -5.89 7.11 56.52 0.40 -5.49 16 14 H -0.27 -5.44 7.11 56.52 0.40 -5.04 16 15 C 0.24 5.60 2.66 -83.68 -0.22 5.38 16 16 C -0.04 -0.92 8.24 -39.38 -0.32 -1.25 16 17 C -0.11 -2.31 9.82 -39.58 -0.39 -2.70 16 18 C -0.05 -0.98 6.32 -39.45 -0.25 -1.23 16 19 Cl -0.10 -1.74 28.95 -51.86 -1.50 -3.24 16 20 C -0.11 -2.26 9.82 -39.58 -0.39 -2.64 16 21 C -0.12 -2.58 9.97 -39.37 -0.39 -2.97 16 22 C -0.19 -2.56 9.90 -26.73 -0.26 -2.82 16 23 C -0.15 -2.44 9.04 -26.73 -0.24 -2.68 16 24 H 0.07 1.17 7.75 -51.93 -0.40 0.76 16 25 H 0.05 0.66 8.10 -51.93 -0.42 0.24 16 26 H 0.05 0.71 8.14 -51.92 -0.42 0.29 16 27 H 0.08 1.44 7.02 -51.93 -0.36 1.07 16 28 H 0.09 1.63 8.12 -51.93 -0.42 1.21 16 29 H 0.27 6.63 8.32 -40.82 -0.34 6.29 16 30 H 0.12 2.71 8.06 -52.49 -0.42 2.29 16 31 H 0.12 2.11 8.06 -52.48 -0.42 1.69 16 32 H 0.12 2.01 8.06 -52.49 -0.42 1.59 16 33 H 0.12 2.48 8.06 -52.49 -0.42 2.06 16 34 H 0.09 1.16 8.07 -51.93 -0.42 0.74 16 35 H 0.09 1.05 8.14 -51.93 -0.42 0.63 16 36 H 0.09 1.31 8.14 -51.93 -0.42 0.89 16 37 H 0.09 1.52 8.14 -51.93 -0.42 1.10 16 LS Contribution 329.61 15.07 4.97 4.97 Total: -1.00 -26.35 329.61 -8.74 -35.10 By element: Atomic # 1 Polarization: 11.87 SS G_CDS: -4.89 Total: 6.99 kcal Atomic # 6 Polarization: -9.72 SS G_CDS: -2.79 Total: -12.51 kcal Atomic # 7 Polarization: -31.28 SS G_CDS: 0.41 Total: -30.87 kcal Atomic # 8 Polarization: -14.25 SS G_CDS: 0.08 Total: -14.17 kcal Atomic # 14 Polarization: 18.76 SS G_CDS: -5.03 Total: 13.74 kcal Atomic # 17 Polarization: -1.74 SS G_CDS: -1.50 Total: -3.24 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -26.35 -8.74 -35.10 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000592653377.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.279 kcal (2) G-P(sol) polarization free energy of solvation -26.354 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.925 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.745 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.099 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.180 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds