Wall clock time and date at job start Tue Mar 31 2020 07:39:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31162 * 1 3 3 Cl 1.73602 * 119.99522 * 2 1 4 4 C 1.50697 * 120.00534 * 179.97438 * 2 1 3 5 5 N 1.46502 * 109.47038 * 114.99768 * 4 2 1 6 6 C 1.34777 * 119.99559 * 179.97438 * 5 4 2 7 7 O 1.21283 * 120.00046 * 0.02562 * 6 5 4 8 8 C 1.50698 * 119.99686 * 180.02562 * 6 5 4 9 9 C 1.53005 * 109.46990 * 180.02562 * 8 6 5 10 10 H 1.08994 * 109.46934 * 305.97546 * 9 8 6 11 11 C 1.50700 * 109.47299 * 65.97885 * 9 8 6 12 12 H 1.08008 * 119.99531 * 26.90748 * 11 9 8 13 13 C 1.37869 * 120.00160 * 206.90965 * 11 9 8 14 14 N 1.31508 * 120.00032 * 353.27812 * 13 11 9 15 15 Si 1.86806 * 120.00073 * 173.54969 * 13 11 9 16 16 H 1.48497 * 109.46895 * 179.72442 * 15 13 11 17 17 H 1.48495 * 109.46957 * 299.72695 * 15 13 11 18 18 H 1.48501 * 109.46761 * 59.72686 * 15 13 11 19 19 C 1.50705 * 109.47056 * 185.97689 * 9 8 6 20 20 C 1.38237 * 120.00118 * 294.44966 * 19 9 8 21 21 C 1.38237 * 119.99818 * 179.78603 * 20 19 9 22 22 C 1.38236 * 120.00003 * 0.44191 * 21 20 19 23 23 C 1.38236 * 119.99991 * 359.81061 * 22 21 20 24 24 C 1.38228 * 119.99825 * 114.71859 * 19 9 8 25 25 H 1.07999 * 119.99419 * 179.97438 * 1 2 3 26 26 H 1.08000 * 120.00118 * 0.02562 * 1 2 3 27 27 H 1.08998 * 109.46916 * 355.00254 * 4 2 1 28 28 H 1.08995 * 109.46698 * 234.99988 * 4 2 1 29 29 H 0.97002 * 120.00062 * 0.02562 * 5 4 2 30 30 H 1.09000 * 109.47229 * 60.00363 * 8 6 5 31 31 H 1.09003 * 109.47630 * 300.00294 * 8 6 5 32 32 H 0.97008 * 120.00303 * 354.69126 * 14 13 11 33 33 H 1.08005 * 119.99967 * 359.97438 * 20 19 9 34 34 H 1.07999 * 119.99448 * 180.27078 * 21 20 19 35 35 H 1.07997 * 119.99991 * 179.83259 * 22 21 20 36 36 H 1.07993 * 119.99965 * 180.02562 * 23 22 21 37 37 H 1.07999 * 120.00249 * 359.97438 * 24 19 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3116 0.0000 0.0000 3 17 2.1795 1.5035 0.0000 4 6 2.0652 -1.3050 0.0006 5 7 2.8149 -1.4366 -1.2512 6 6 3.5680 -2.5319 -1.4736 7 8 3.6248 -3.4088 -0.6377 8 6 4.3396 -2.6670 -2.7610 9 6 5.1047 -3.9920 -2.7604 10 1 5.7178 -4.0571 -1.8617 11 6 4.1256 -5.1374 -2.7848 12 1 3.1472 -5.0022 -3.2218 13 6 4.4788 -6.3577 -2.2491 14 7 5.7107 -6.5633 -1.8373 15 14 3.2094 -7.7216 -2.1153 16 1 3.8382 -8.9259 -1.5157 17 1 2.0861 -7.2697 -1.2556 18 1 2.6949 -8.0534 -3.4682 19 6 5.9896 -4.0617 -3.9783 20 6 5.4266 -4.1139 -5.2398 21 6 6.2384 -4.1734 -6.3571 22 6 7.6131 -4.1898 -6.2125 23 6 8.1760 -4.1428 -4.9509 24 6 7.3642 -4.0790 -3.8338 25 1 -0.5399 -0.9354 -0.0004 26 1 -0.5400 0.9353 -0.0004 27 1 1.3604 -2.1315 0.0905 28 1 2.7573 -1.3244 0.8424 29 1 2.7698 -0.7350 -1.9196 30 1 5.0443 -1.8402 -2.8507 31 1 3.6478 -2.6476 -3.6031 32 1 6.3895 -5.8852 -1.9803 33 1 4.3524 -4.1052 -5.3525 34 1 5.7985 -4.2098 -7.3427 35 1 8.2472 -4.2390 -7.0853 36 1 9.2499 -4.1552 -4.8380 37 1 7.8040 -4.0421 -2.8481 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000793532425.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:39:54 Heat of formation + Delta-G solvation = -11.817512 kcal Electronic energy + Delta-G solvation = -20636.125274 eV Core-core repulsion = 17404.188364 eV Total energy + Delta-G solvation = -3231.936909 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 293.092 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -39.26775 -38.34621 -37.11556 -35.15697 -34.16937 -32.47848 -31.28258 -30.10918 -29.07867 -26.56316 -24.58718 -22.81390 -21.66761 -20.53924 -20.25410 -19.39601 -17.08899 -16.49135 -16.26980 -15.68608 -15.49876 -14.57584 -14.39447 -14.09168 -13.94161 -13.65584 -13.18079 -12.94291 -12.66528 -12.47564 -12.35080 -12.07766 -11.91730 -11.84464 -11.45958 -11.02870 -10.90338 -10.72166 -10.43242 -10.13050 -10.04114 -9.69248 -9.60095 -9.03980 -8.72199 -8.60546 -8.28147 -8.13654 -7.63767 -6.22172 -3.91232 1.53394 1.98343 2.19290 2.24852 3.42715 3.49853 3.54939 3.69187 3.71133 4.37211 4.60968 4.68124 5.25957 5.35311 5.38879 5.54039 5.59912 5.63646 5.76183 5.79695 5.83067 5.97707 6.00376 6.08110 6.16958 6.31958 6.42278 6.67373 6.74482 6.79066 6.92935 7.20941 7.22952 7.38053 7.72959 7.85914 7.95446 8.22758 8.51531 8.94008 8.98312 9.77727 11.17237 Molecular weight = 293.09amu Principal moments of inertia in cm(-1) A = 0.013632 B = 0.004636 C = 0.003741 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2053.547055 B = 6038.733099 C = 7482.309054 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C -0.086 4.086 3 Cl -0.085 7.085 4 C 0.160 3.840 5 N -0.746 5.746 6 C 0.515 3.485 7 O -0.497 6.497 8 C -0.115 4.115 9 C 0.072 3.928 10 H 0.050 0.950 11 C -0.568 4.568 12 H 0.045 0.955 13 C 0.032 3.968 14 N -0.906 5.906 15 Si 1.060 2.940 16 H -0.284 1.284 17 H -0.289 1.289 18 H -0.291 1.291 19 C -0.033 4.033 20 C -0.106 4.106 21 C -0.130 4.130 22 C -0.152 4.152 23 C -0.125 4.125 24 C -0.130 4.130 25 H 0.127 0.873 26 H 0.114 0.886 27 H 0.086 0.914 28 H 0.079 0.921 29 H 0.396 0.604 30 H 0.066 0.934 31 H 0.080 0.920 32 H 0.271 0.729 33 H 0.115 0.885 34 H 0.107 0.893 35 H 0.106 0.894 36 H 0.107 0.893 37 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.115 13.942 -1.446 15.292 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.196 4.196 2 C -0.113 4.113 3 Cl -0.057 7.057 4 C 0.036 3.964 5 N -0.403 5.403 6 C 0.302 3.698 7 O -0.369 6.369 8 C -0.156 4.156 9 C 0.053 3.947 10 H 0.068 0.932 11 C -0.605 4.605 12 H 0.063 0.937 13 C -0.174 4.174 14 N -0.541 5.541 15 Si 0.889 3.111 16 H -0.209 1.209 17 H -0.216 1.216 18 H -0.217 1.217 19 C -0.033 4.033 20 C -0.124 4.124 21 C -0.148 4.148 22 C -0.171 4.171 23 C -0.143 4.143 24 C -0.148 4.148 25 H 0.145 0.855 26 H 0.133 0.867 27 H 0.104 0.896 28 H 0.097 0.903 29 H 0.229 0.771 30 H 0.085 0.915 31 H 0.098 0.902 32 H 0.082 0.918 33 H 0.133 0.867 34 H 0.125 0.875 35 H 0.124 0.876 36 H 0.125 0.875 37 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -6.204 11.814 -0.235 13.346 hybrid contribution 0.180 1.982 -0.955 2.207 sum -6.024 13.795 -1.190 15.100 Atomic orbital electron populations 1.24159 0.93710 1.04047 0.97653 1.23529 0.94120 0.87934 1.05680 1.98383 1.78157 1.32242 1.96882 1.20299 0.95498 0.91463 0.89112 1.46174 1.50947 1.23430 1.19725 1.20899 0.78934 0.80333 0.89662 1.90759 1.61612 1.38483 1.45998 1.21663 0.98870 1.00749 0.94282 1.17871 0.93690 0.91613 0.91493 0.93210 1.21525 0.99463 0.96587 1.42930 0.93687 1.25571 0.99540 0.99276 0.92982 1.70731 1.02057 1.37687 1.43628 0.83686 0.75146 0.76101 0.76138 1.20932 1.21551 1.21732 1.20841 0.93537 0.92339 0.96618 1.20924 0.99453 1.00076 0.91986 1.21015 0.93818 1.01919 0.98076 1.20827 0.94960 1.04622 0.96642 1.20965 0.98786 1.01525 0.93004 1.21076 0.93834 1.01989 0.97914 0.85482 0.86747 0.89605 0.90296 0.77104 0.91510 0.90181 0.91777 0.86689 0.87456 0.87587 0.87453 0.87150 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -1.28 14.05 28.97 0.41 -0.87 16 2 C -0.09 -0.88 5.87 -36.07 -0.21 -1.09 16 3 Cl -0.08 -0.88 28.99 -51.86 -1.50 -2.39 16 4 C 0.16 2.09 5.99 -5.19 -0.03 2.06 16 5 N -0.75 -10.95 5.55 -61.47 -0.34 -11.29 16 6 C 0.51 10.10 7.58 -10.99 -0.08 10.02 16 7 O -0.50 -12.25 15.02 5.55 0.08 -12.17 16 8 C -0.12 -2.22 4.95 -27.88 -0.14 -2.36 16 9 C 0.07 1.73 1.23 -92.92 -0.11 1.61 16 10 H 0.05 1.35 6.59 -51.93 -0.34 1.00 16 11 C -0.57 -15.34 6.35 -34.44 -0.22 -15.56 16 12 H 0.04 1.22 7.82 -52.48 -0.41 0.81 16 13 C 0.03 0.92 5.45 -17.83 -0.10 0.82 16 14 N -0.91 -27.65 13.56 55.43 0.75 -26.90 16 15 Si 1.06 26.13 29.91 -169.99 -5.08 21.04 16 16 H -0.28 -7.05 7.11 56.52 0.40 -6.65 16 17 H -0.29 -6.97 7.11 56.52 0.40 -6.57 16 18 H -0.29 -6.79 7.11 56.52 0.40 -6.38 16 19 C -0.03 -0.72 4.53 -104.62 -0.47 -1.19 16 20 C -0.11 -2.17 8.90 -39.58 -0.35 -2.52 16 21 C -0.13 -2.34 10.05 -39.58 -0.40 -2.74 16 22 C -0.15 -2.65 10.05 -39.58 -0.40 -3.04 16 23 C -0.12 -2.29 10.05 -39.58 -0.40 -2.69 16 24 C -0.13 -2.71 9.18 -39.58 -0.36 -3.08 16 25 H 0.13 0.91 7.84 -52.49 -0.41 0.50 16 26 H 0.11 0.77 8.06 -52.49 -0.42 0.35 16 27 H 0.09 1.15 7.80 -51.93 -0.40 0.75 16 28 H 0.08 1.11 8.14 -51.93 -0.42 0.68 16 29 H 0.40 4.81 8.46 -40.82 -0.35 4.47 16 30 H 0.07 1.13 8.14 -51.93 -0.42 0.70 16 31 H 0.08 1.43 7.96 -51.93 -0.41 1.02 16 32 H 0.27 8.15 6.24 -40.82 -0.25 7.89 16 33 H 0.12 2.29 7.85 -52.48 -0.41 1.87 16 34 H 0.11 1.62 8.06 -52.49 -0.42 1.20 16 35 H 0.11 1.53 8.06 -52.49 -0.42 1.10 16 36 H 0.11 1.68 8.06 -52.49 -0.42 1.26 16 37 H 0.11 2.27 7.95 -52.49 -0.42 1.86 16 LS Contribution 335.59 15.07 5.06 5.06 Total: -1.00 -32.76 335.59 -8.65 -41.41 By element: Atomic # 1 Polarization: 10.60 SS G_CDS: -4.74 Total: 5.86 kcal Atomic # 6 Polarization: -17.75 SS G_CDS: -2.87 Total: -20.62 kcal Atomic # 7 Polarization: -38.60 SS G_CDS: 0.41 Total: -38.19 kcal Atomic # 8 Polarization: -12.25 SS G_CDS: 0.08 Total: -12.17 kcal Atomic # 14 Polarization: 26.13 SS G_CDS: -5.08 Total: 21.04 kcal Atomic # 17 Polarization: -0.88 SS G_CDS: -1.50 Total: -2.39 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -32.76 -8.65 -41.41 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000793532425.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.595 kcal (2) G-P(sol) polarization free energy of solvation -32.761 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.166 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.652 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.412 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.818 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds