Wall clock time and date at job start Tue Mar 31 2020 07:14:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.50705 * 119.99614 * 2 1 4 4 C 1.33149 * 119.99970 * 180.02562 * 2 1 3 5 5 C 1.50704 * 119.99929 * 189.53633 * 4 2 1 6 6 C 1.46901 * 120.00134 * 9.52947 * 4 2 1 7 7 O 1.21655 * 120.00321 * 231.82377 * 6 4 2 8 8 N 1.34776 * 119.99491 * 51.82441 * 6 4 2 9 9 C 1.36865 * 119.99577 * 184.04742 * 8 6 4 10 10 H 1.08002 * 120.00158 * 215.01296 * 9 8 6 11 11 C 1.39001 * 120.00351 * 35.01713 * 9 8 6 12 12 N 1.31372 * 119.99500 * 21.93149 * 11 9 8 13 13 Si 1.86793 * 120.00060 * 201.93999 * 11 9 8 14 14 H 1.48492 * 109.47716 * 89.99624 * 13 11 9 15 15 H 1.48508 * 109.46864 * 209.99865 * 13 11 9 16 16 H 1.48501 * 109.47364 * 329.99241 * 13 11 9 17 17 C 1.39705 * 120.00532 * 4.05379 * 8 6 4 18 18 C 1.38989 * 120.06777 * 22.29930 * 17 8 6 19 19 C 1.38059 * 119.93314 * 180.28025 * 18 17 8 20 20 C 1.38428 * 120.06751 * 359.45274 * 19 18 17 21 21 Cl 1.73593 * 119.93325 * 180.30085 * 20 19 18 22 22 C 1.38422 * 120.13422 * 0.27641 * 20 19 18 23 23 C 1.38063 * 120.06704 * 359.97438 * 22 20 19 24 24 H 1.09005 * 109.47069 * 275.62701 * 1 2 3 25 25 H 1.09003 * 109.47727 * 35.61950 * 1 2 3 26 26 H 1.08996 * 109.47468 * 155.62629 * 1 2 3 27 27 H 1.08997 * 109.47421 * 274.58870 * 3 2 1 28 28 H 1.08997 * 109.47177 * 34.59619 * 3 2 1 29 29 H 1.09000 * 109.46756 * 154.59228 * 3 2 1 30 30 H 1.08997 * 109.47133 * 185.94137 * 5 4 2 31 31 H 1.09003 * 109.46966 * 305.94622 * 5 4 2 32 32 H 1.09006 * 109.47273 * 65.93768 * 5 4 2 33 33 H 0.97005 * 119.99644 * 184.97180 * 12 11 9 34 34 H 1.07997 * 120.03172 * 0.02562 * 18 17 8 35 35 H 1.08002 * 119.97065 * 179.72920 * 19 18 17 36 36 H 1.07993 * 119.97008 * 180.02562 * 22 20 19 37 37 H 1.08000 * 120.03639 * 180.02562 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2604 1.3052 0.0000 4 6 2.1727 -1.1531 -0.0005 5 6 3.6641 -1.1622 0.2157 6 6 1.4534 -2.4164 -0.2117 7 8 1.5969 -3.3364 0.5713 8 7 0.6346 -2.5563 -1.2730 9 6 -0.0989 -3.7018 -1.4251 10 1 -0.2875 -4.0951 -2.4131 11 6 -0.6012 -4.3589 -0.3080 12 7 -0.7615 -3.7064 0.8210 13 14 -1.0481 -6.1696 -0.4119 14 1 0.1353 -6.9929 -0.0561 15 1 -2.1561 -6.4610 0.5330 16 1 -1.4792 -6.4945 -1.7953 17 6 0.5346 -1.5322 -2.2180 18 6 1.5608 -0.6042 -2.3504 19 6 1.4565 0.4101 -3.2811 20 6 0.3364 0.4968 -4.0899 21 17 0.2124 1.7690 -5.2645 22 6 -0.6848 -0.4293 -3.9643 23 6 -0.5886 -1.4428 -3.0318 24 1 -0.3633 0.1008 1.0228 25 1 -0.3635 0.8354 -0.5985 26 1 -0.3634 -0.9360 -0.4241 27 1 2.3709 1.6610 -1.0243 28 1 1.7095 2.0428 0.5835 29 1 3.2460 1.1557 0.4409 30 1 4.0451 -2.1741 0.0778 31 1 4.1394 -0.4939 -0.5024 32 1 3.8866 -0.8250 1.2281 33 1 -1.0433 -4.1802 1.6191 34 1 2.4370 -0.6740 -1.7229 35 1 2.2515 1.1342 -3.3815 36 1 -1.5572 -0.3594 -4.5970 37 1 -1.3854 -2.1653 -2.9346 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000843611225.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:14:25 Heat of formation + Delta-G solvation = 35.598968 kcal Electronic energy + Delta-G solvation = -22387.029651 eV Core-core repulsion = 19157.148874 eV Total energy + Delta-G solvation = -3229.880776 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 293.092 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -40.55457 -37.71663 -36.07445 -35.90522 -34.26916 -32.08069 -30.35088 -29.92878 -28.42910 -27.68152 -25.49292 -24.05535 -22.19392 -21.73266 -20.36009 -18.01254 -17.49780 -16.20205 -15.56685 -15.15731 -14.62784 -14.49445 -14.39879 -13.79711 -13.55642 -13.42711 -13.14744 -12.52082 -12.51548 -12.41461 -12.05734 -11.91336 -11.79658 -11.74609 -11.36432 -11.17223 -11.03206 -10.96064 -10.77934 -10.72376 -10.60564 -10.34085 -10.22917 -9.41151 -8.77622 -8.52488 -8.21520 -7.69429 -6.95544 -6.38465 -4.12049 1.71381 1.91350 2.32856 2.70278 3.21035 3.27693 3.29601 4.00916 4.07497 4.51783 4.62348 5.12846 5.27235 5.35676 5.41791 5.42723 5.61368 5.67850 5.84359 5.92795 5.99550 6.07251 6.11814 6.13908 6.18021 6.31523 6.36026 6.40607 6.53949 6.73320 6.78574 6.90445 7.08199 7.11366 7.26564 7.32405 7.44011 7.95793 8.64321 8.79776 9.28646 9.83088 10.64590 Molecular weight = 293.09amu Principal moments of inertia in cm(-1) A = 0.016305 B = 0.006876 C = 0.005320 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1716.836301 B = 4071.447936 C = 5261.879740 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C -0.085 4.085 3 C -0.120 4.120 4 C -0.174 4.174 5 C -0.096 4.096 6 C 0.522 3.478 7 O -0.493 6.493 8 N -0.388 5.388 9 C -0.366 4.366 10 H 0.094 0.906 11 C 0.073 3.927 12 N -0.814 5.814 13 Si 0.916 3.084 14 H -0.275 1.275 15 H -0.284 1.284 16 H -0.270 1.270 17 C 0.193 3.807 18 C -0.183 4.183 19 C -0.084 4.084 20 C -0.096 4.096 21 Cl -0.105 7.105 22 C -0.082 4.082 23 C -0.152 4.152 24 H 0.061 0.939 25 H 0.055 0.945 26 H 0.099 0.901 27 H 0.073 0.927 28 H 0.060 0.940 29 H 0.064 0.936 30 H 0.063 0.937 31 H 0.063 0.937 32 H 0.067 0.933 33 H 0.271 0.729 34 H 0.149 0.851 35 H 0.119 0.881 36 H 0.121 0.879 37 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.495 9.205 -4.980 11.034 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.193 4.193 2 C -0.086 4.086 3 C -0.176 4.176 4 C -0.177 4.177 5 C -0.153 4.153 6 C 0.313 3.687 7 O -0.367 6.367 8 N -0.095 5.095 9 C -0.491 4.491 10 H 0.112 0.888 11 C -0.140 4.140 12 N -0.445 5.445 13 Si 0.742 3.258 14 H -0.201 1.201 15 H -0.210 1.210 16 H -0.194 1.194 17 C 0.092 3.908 18 C -0.203 4.203 19 C -0.103 4.103 20 C -0.124 4.124 21 Cl -0.077 7.077 22 C -0.102 4.102 23 C -0.173 4.173 24 H 0.080 0.920 25 H 0.074 0.926 26 H 0.117 0.883 27 H 0.092 0.908 28 H 0.079 0.921 29 H 0.083 0.917 30 H 0.082 0.918 31 H 0.082 0.918 32 H 0.086 0.914 33 H 0.082 0.918 34 H 0.167 0.833 35 H 0.137 0.863 36 H 0.139 0.861 37 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 3.457 8.683 -4.325 10.298 hybrid contribution -0.385 -0.641 0.030 0.749 sum 3.072 8.041 -4.295 9.620 Atomic orbital electron populations 1.21307 0.91534 1.04734 1.01735 1.21962 0.96231 0.93730 0.96712 1.20939 0.99610 0.94819 1.02232 1.21363 0.96670 0.93673 1.06006 1.20587 0.90973 1.02526 1.01243 1.18037 0.79789 0.87446 0.83439 1.90643 1.61034 1.41722 1.43349 1.41346 1.35540 1.13187 1.19425 1.19226 1.33800 1.01098 0.95006 0.88792 1.25157 0.93827 0.99769 0.95249 1.69895 1.37320 1.36293 1.01006 0.86121 0.78017 0.83458 0.78165 1.20068 1.21025 1.19449 1.18319 0.92956 0.87962 0.91587 1.21757 1.00920 0.97020 1.00653 1.20573 0.96332 0.98781 0.94649 1.20525 0.99137 0.94681 0.98060 1.98292 1.98313 1.52216 1.58865 1.20690 0.97408 0.93759 0.98329 1.20836 0.98049 1.00171 0.98266 0.92011 0.92622 0.88273 0.90814 0.92055 0.91726 0.91762 0.91832 0.91439 0.91833 0.83350 0.86262 0.86093 0.84536 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.62 8.48 36.00 0.31 -2.32 16 2 C -0.09 -1.49 3.38 -101.12 -0.34 -1.83 16 3 C -0.12 -1.57 9.36 36.01 0.34 -1.23 16 4 C -0.17 -3.40 3.24 -102.89 -0.33 -3.73 16 5 C -0.10 -1.52 8.31 36.01 0.30 -1.22 16 6 C 0.52 12.88 5.36 -12.75 -0.07 12.81 16 7 O -0.49 -14.07 14.31 5.23 0.07 -14.00 16 8 N -0.39 -9.39 1.97 -60.28 -0.12 -9.51 16 9 C -0.37 -9.50 8.06 -15.02 -0.12 -9.62 16 10 H 0.09 2.35 7.73 -52.49 -0.41 1.94 16 11 C 0.07 1.94 4.27 -17.47 -0.07 1.86 16 12 N -0.81 -22.69 11.25 55.50 0.62 -22.07 16 13 Si 0.92 20.77 29.61 -169.99 -5.03 15.74 16 14 H -0.27 -6.42 7.11 56.52 0.40 -6.02 16 15 H -0.28 -6.36 7.11 56.52 0.40 -5.95 16 16 H -0.27 -5.84 7.11 56.52 0.40 -5.44 16 17 C 0.19 3.98 3.63 -83.71 -0.30 3.67 16 18 C -0.18 -3.26 5.88 -39.37 -0.23 -3.49 16 19 C -0.08 -1.32 9.21 -39.58 -0.36 -1.68 16 20 C -0.10 -1.53 6.32 -39.44 -0.25 -1.77 16 21 Cl -0.11 -1.47 28.95 -51.86 -1.50 -2.97 16 22 C -0.08 -1.36 9.82 -39.58 -0.39 -1.75 16 23 C -0.15 -2.91 9.20 -39.37 -0.36 -3.27 16 24 H 0.06 1.19 8.14 -51.93 -0.42 0.77 16 25 H 0.05 0.96 8.14 -51.93 -0.42 0.54 16 26 H 0.10 2.25 4.17 -51.93 -0.22 2.04 16 27 H 0.07 0.89 7.19 -51.93 -0.37 0.52 16 28 H 0.06 0.74 8.14 -51.93 -0.42 0.32 16 29 H 0.06 0.76 6.37 -51.93 -0.33 0.42 16 30 H 0.06 1.08 7.99 -51.93 -0.42 0.67 16 31 H 0.06 0.81 7.14 -51.93 -0.37 0.44 16 32 H 0.07 0.97 8.03 -51.93 -0.42 0.55 16 33 H 0.27 7.30 8.32 -40.82 -0.34 6.96 16 34 H 0.15 2.59 3.48 -52.63 -0.18 2.40 16 35 H 0.12 1.59 8.06 -52.49 -0.42 1.17 16 36 H 0.12 1.75 8.06 -52.49 -0.42 1.33 16 37 H 0.14 2.71 7.16 -52.49 -0.38 2.33 16 LS Contribution 310.04 15.07 4.67 4.67 Total: -1.00 -29.20 310.04 -7.52 -36.72 By element: Atomic # 1 Polarization: 9.33 SS G_CDS: -4.34 Total: 4.99 kcal Atomic # 6 Polarization: -11.67 SS G_CDS: -1.90 Total: -13.57 kcal Atomic # 7 Polarization: -32.08 SS G_CDS: 0.51 Total: -31.58 kcal Atomic # 8 Polarization: -14.07 SS G_CDS: 0.07 Total: -14.00 kcal Atomic # 14 Polarization: 20.77 SS G_CDS: -5.03 Total: 15.74 kcal Atomic # 17 Polarization: -1.47 SS G_CDS: -1.50 Total: -2.97 kcal Total LS contribution 4.67 Total: 4.67 kcal Total: -29.20 -7.52 -36.72 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000843611225.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 72.314 kcal (2) G-P(sol) polarization free energy of solvation -29.199 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.115 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.516 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.715 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.599 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds