Wall clock time and date at job start Tue Mar 31 2020 07:17:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38425 * 119.84144 * 2 1 4 4 C 1.37896 * 120.18512 * 179.76812 * 3 2 1 5 5 C 1.39620 * 119.86093 * 0.53387 * 4 3 2 6 6 C 1.47774 * 120.15355 * 179.74775 * 5 4 3 7 7 O 1.21561 * 119.99820 * 155.04050 * 6 5 4 8 8 N 1.34775 * 119.99831 * 335.03391 * 6 5 4 9 9 C 1.47584 * 134.48924 * 174.78566 * 8 6 5 10 10 C 1.53946 * 86.11153 * 155.36520 * 9 8 6 11 11 O 1.42900 * 113.74199 * 269.15206 * 10 9 8 12 12 C 1.50709 * 113.74062 * 137.95663 * 10 9 8 13 13 H 1.07999 * 119.99905 * 1.91935 * 12 10 9 14 14 C 1.37873 * 120.00070 * 181.92350 * 12 10 9 15 15 N 1.31515 * 119.99858 * 359.97438 * 14 12 10 16 16 Si 1.86792 * 120.00029 * 179.97438 * 14 12 10 17 17 H 1.48497 * 109.47326 * 180.02562 * 16 14 12 18 18 H 1.48500 * 109.47439 * 299.99994 * 16 14 12 19 19 H 1.48505 * 109.47170 * 59.99858 * 16 14 12 20 20 C 1.47812 * 134.45798 * 354.66792 * 8 6 5 21 21 C 1.39698 * 119.69376 * 359.46754 * 5 4 3 22 22 Cl 1.73599 * 120.09682 * 180.23191 * 21 5 4 23 23 C 1.38157 * 119.81102 * 0.25588 * 21 5 4 24 24 H 1.09008 * 109.46626 * 269.97559 * 1 2 3 25 25 H 1.08996 * 109.47164 * 29.97089 * 1 2 3 26 26 H 1.08998 * 109.46972 * 149.97924 * 1 2 3 27 27 H 1.08007 * 119.90557 * 0.04889 * 3 2 1 28 28 H 1.07995 * 120.06546 * 180.27645 * 4 3 2 29 29 H 1.08994 * 113.76978 * 41.06583 * 9 8 6 30 30 H 1.08997 * 113.87307 * 269.67602 * 9 8 6 31 31 H 0.96699 * 114.00319 * 178.07709 * 11 10 9 32 32 H 0.96999 * 120.00235 * 180.02562 * 15 14 12 33 33 H 1.08997 * 113.77379 * 90.37203 * 20 8 6 34 34 H 1.09009 * 113.83254 * 318.90622 * 20 8 6 35 35 H 1.08000 * 119.93144 * 179.97438 * 23 21 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1958 1.2007 0.0000 4 6 3.5748 1.2090 0.0048 5 6 4.2772 0.0024 -0.0016 6 6 5.7550 0.0037 -0.0021 7 8 6.3638 -0.9524 0.4371 8 7 6.4277 1.0650 -0.4896 9 6 7.8524 1.4438 -0.5582 10 6 7.4549 2.3135 -1.7647 11 8 7.5540 1.6366 -3.0193 12 6 8.1097 3.6708 -1.7762 13 1 8.8105 3.9389 -0.9994 14 6 7.8138 4.5705 -2.7782 15 7 6.9607 4.2439 -3.7242 16 14 8.6248 6.2531 -2.7920 17 1 8.1414 7.0260 -3.9642 18 1 8.2788 6.9797 -1.5439 19 1 10.0985 6.0917 -2.8783 20 6 6.0341 2.3156 -1.1721 21 6 3.5766 -1.2062 -0.0015 22 17 4.4395 -2.7126 -0.0034 23 6 2.1951 -1.1993 -0.0005 24 1 -0.3633 -0.0004 1.0278 25 1 -0.3633 0.8902 -0.5134 26 1 -0.3633 -0.8898 -0.5141 27 1 1.6517 2.1337 0.0008 28 1 4.1102 2.1469 0.0093 29 1 8.5152 0.6166 -0.8122 30 1 8.1983 2.0173 0.3018 31 1 7.2773 2.1700 -3.7769 32 1 6.7528 4.8767 -4.4294 33 1 5.8430 3.1458 -0.4922 34 1 5.2479 2.1832 -1.9154 35 1 1.6515 -2.1325 -0.0009 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000193981621.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:17:38 Heat of formation + Delta-G solvation = -27.678687 kcal Electronic energy + Delta-G solvation = -21313.020406 eV Core-core repulsion = 17917.251132 eV Total energy + Delta-G solvation = -3395.769275 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 295.076 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -40.06686 -38.79575 -37.14660 -36.22433 -33.98424 -32.85095 -32.23745 -30.82207 -28.93671 -27.22466 -25.38791 -25.20303 -22.68878 -22.13709 -20.13839 -18.80118 -17.52435 -16.71378 -16.15530 -15.74313 -15.30793 -15.07619 -14.53670 -14.25515 -14.16903 -13.98606 -13.76453 -13.19667 -12.75438 -12.62592 -12.45758 -12.33303 -11.96887 -11.76266 -11.59560 -11.31442 -11.18766 -11.06892 -11.04163 -10.76034 -10.55489 -10.31187 -9.57643 -9.16116 -8.91589 -8.78430 -8.62684 -8.40906 -7.82301 -6.40949 -4.51705 0.85825 1.19570 2.29746 3.11565 3.14746 3.20958 3.23134 3.47433 3.88420 4.16960 4.59801 4.71522 4.80382 4.87910 5.07456 5.12311 5.35621 5.38538 5.50485 5.60186 5.71133 5.86191 5.90490 6.05555 6.18076 6.22020 6.36077 6.37749 6.44366 6.60901 6.64224 6.74934 7.07255 7.60871 7.80108 8.43218 8.51526 8.73469 9.19660 9.41767 10.65671 Molecular weight = 295.08amu Principal moments of inertia in cm(-1) A = 0.020362 B = 0.004559 C = 0.003964 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1374.768133 B = 6139.834617 C = 7061.771578 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.061 4.061 3 C -0.126 4.126 4 C -0.070 4.070 5 C -0.117 4.117 6 C 0.566 3.434 7 O -0.539 6.539 8 N -0.626 5.626 9 C 0.114 3.886 10 C 0.240 3.760 11 O -0.571 6.571 12 C -0.539 4.539 13 H 0.071 0.929 14 C 0.073 3.927 15 N -0.898 5.898 16 Si 0.907 3.093 17 H -0.285 1.285 18 H -0.274 1.274 19 H -0.273 1.273 20 C 0.075 3.925 21 C 0.014 3.986 22 Cl -0.042 7.042 23 C -0.126 4.126 24 H 0.074 0.926 25 H 0.071 0.929 26 H 0.069 0.931 27 H 0.133 0.867 28 H 0.142 0.858 29 H 0.072 0.928 30 H 0.087 0.913 31 H 0.391 0.609 32 H 0.274 0.726 33 H 0.083 0.917 34 H 0.071 0.929 35 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.256 -4.093 5.546 14.061 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.061 4.061 3 C -0.144 4.144 4 C -0.088 4.088 5 C -0.121 4.121 6 C 0.355 3.645 7 O -0.419 6.419 8 N -0.360 5.360 9 C -0.008 4.008 10 C 0.198 3.802 11 O -0.383 6.383 12 C -0.577 4.577 13 H 0.089 0.911 14 C -0.129 4.129 15 N -0.538 5.538 16 Si 0.734 3.266 17 H -0.210 1.210 18 H -0.199 1.199 19 H -0.198 1.198 20 C -0.048 4.048 21 C -0.014 4.014 22 Cl -0.012 7.012 23 C -0.145 4.145 24 H 0.093 0.907 25 H 0.090 0.910 26 H 0.088 0.912 27 H 0.151 0.849 28 H 0.160 0.840 29 H 0.090 0.910 30 H 0.105 0.895 31 H 0.246 0.754 32 H 0.084 0.916 33 H 0.101 0.899 34 H 0.089 0.911 35 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -11.818 -5.313 6.041 14.296 hybrid contribution 0.109 1.327 -0.418 1.395 sum -11.709 -3.986 5.624 13.587 Atomic orbital electron populations 1.20830 0.90402 1.03235 1.02642 1.19999 0.96406 0.92430 0.97281 1.21084 0.93872 0.97933 1.01539 1.21602 0.94324 0.97529 0.95383 1.19921 0.94392 0.92587 1.05194 1.17700 0.86007 0.82521 0.78317 1.90774 1.69414 1.33658 1.48017 1.50107 1.10421 1.18701 1.56749 1.23460 0.81893 0.97238 0.98172 1.19834 0.88948 0.89362 0.82051 1.86076 1.89529 1.45220 1.17457 1.21469 1.27008 0.97716 1.11484 0.91069 1.25058 0.93976 0.99259 0.94647 1.69396 1.33577 1.37133 1.13647 0.86403 0.79933 0.82515 0.77758 1.21011 1.19905 1.19836 1.24423 1.03228 0.82731 0.94385 1.20977 0.92116 0.87509 1.00787 1.98397 1.76997 1.29586 1.96263 1.20849 0.91455 0.98783 1.03408 0.90750 0.91005 0.91223 0.84949 0.84005 0.90964 0.89470 0.75395 0.91618 0.89940 0.91084 0.84692 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.88 10.00 36.01 0.36 -0.52 16 2 C -0.06 -0.69 5.88 -104.54 -0.62 -1.31 16 3 C -0.13 -1.54 9.68 -39.64 -0.38 -1.93 16 4 C -0.07 -1.06 8.83 -39.19 -0.35 -1.41 16 5 C -0.12 -2.10 5.82 -104.94 -0.61 -2.71 16 6 C 0.57 12.03 7.70 -12.36 -0.10 11.93 16 7 O -0.54 -12.64 15.27 5.31 0.08 -12.56 16 8 N -0.63 -13.35 3.58 -179.28 -0.64 -14.00 16 9 C 0.11 2.48 8.23 -2.96 -0.02 2.45 16 10 C 0.24 5.66 1.40 -90.84 -0.13 5.54 16 11 O -0.57 -14.67 13.48 -35.23 -0.48 -15.14 16 12 C -0.54 -13.21 8.61 -34.44 -0.30 -13.51 16 13 H 0.07 1.70 7.81 -52.49 -0.41 1.29 16 14 C 0.07 1.79 5.39 -17.82 -0.10 1.69 16 15 N -0.90 -22.26 11.20 55.43 0.62 -21.64 16 16 Si 0.91 19.06 29.54 -169.99 -5.02 14.03 16 17 H -0.28 -5.97 7.11 56.52 0.40 -5.57 16 18 H -0.27 -5.67 7.11 56.52 0.40 -5.27 16 19 H -0.27 -5.80 7.11 56.52 0.40 -5.40 16 20 C 0.07 1.57 5.69 -2.84 -0.02 1.55 16 21 C 0.01 0.23 6.34 -39.07 -0.25 -0.02 16 22 Cl -0.04 -0.71 26.35 -51.86 -1.37 -2.08 16 23 C -0.13 -1.62 9.47 -39.60 -0.37 -2.00 16 24 H 0.07 0.49 8.14 -51.92 -0.42 0.07 16 25 H 0.07 0.48 8.08 -51.93 -0.42 0.07 16 26 H 0.07 0.47 8.08 -51.93 -0.42 0.05 16 27 H 0.13 1.26 8.06 -52.48 -0.42 0.84 16 28 H 0.14 2.12 5.56 -52.49 -0.29 1.83 16 29 H 0.07 1.61 8.14 -51.93 -0.42 1.19 16 30 H 0.09 1.71 8.09 -51.93 -0.42 1.29 16 31 H 0.39 10.08 6.60 45.56 0.30 10.39 16 32 H 0.27 6.48 8.31 -40.82 -0.34 6.15 16 33 H 0.08 1.60 7.71 -51.93 -0.40 1.20 16 34 H 0.07 1.51 7.86 -51.92 -0.41 1.10 16 35 H 0.14 1.40 8.06 -52.49 -0.42 0.98 16 LS Contribution 314.30 15.07 4.74 4.74 Total: -1.00 -28.45 314.30 -8.24 -36.69 By element: Atomic # 1 Polarization: 13.50 SS G_CDS: -3.30 Total: 10.20 kcal Atomic # 6 Polarization: 2.64 SS G_CDS: -2.87 Total: -0.24 kcal Atomic # 7 Polarization: -35.62 SS G_CDS: -0.02 Total: -35.64 kcal Atomic # 8 Polarization: -27.31 SS G_CDS: -0.39 Total: -27.71 kcal Atomic # 14 Polarization: 19.06 SS G_CDS: -5.02 Total: 14.03 kcal Atomic # 17 Polarization: -0.71 SS G_CDS: -1.37 Total: -2.08 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -28.45 -8.24 -36.69 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000193981621.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.006 kcal (2) G-P(sol) polarization free energy of solvation -28.450 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.443 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.235 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.685 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.679 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds