Wall clock time and date at job start Tue Mar 31 2020 07:34:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17401 * 1 3 3 C 1.47194 * 179.97438 * 2 1 4 4 N 1.46504 * 109.47249 * 42.07154 * 3 2 1 5 5 C 1.36907 * 119.99806 * 264.10643 * 4 3 2 6 6 H 1.07993 * 120.00477 * 205.25504 * 5 4 3 7 7 C 1.39025 * 119.99879 * 25.25650 * 5 4 3 8 8 N 1.31386 * 119.99726 * 9.20848 * 7 5 4 9 9 Si 1.86792 * 120.00088 * 189.20666 * 7 5 4 10 10 H 1.48504 * 109.47241 * 0.02562 * 9 7 5 11 11 H 1.48497 * 109.47236 * 120.00080 * 9 7 5 12 12 H 1.48500 * 109.47203 * 240.00155 * 9 7 5 13 13 C 1.34776 * 120.00043 * 84.11082 * 4 3 2 14 14 O 1.21620 * 120.00210 * 5.43487 * 13 4 3 15 15 C 1.47430 * 119.99664 * 185.43592 * 13 4 3 16 16 C 1.39768 * 120.19838 * 40.79816 * 15 13 4 17 17 C 1.37771 * 119.90248 * 180.02562 * 16 15 13 18 18 C 1.38562 * 120.30559 * 359.97363 * 17 16 15 19 19 C 1.38079 * 120.40057 * 0.02562 * 18 17 16 20 20 C 1.38681 * 120.09185 * 0.02562 * 19 18 17 21 21 O 1.35656 * 120.15576 * 180.02562 * 20 19 18 22 22 C 1.42899 * 116.99905 * 359.95823 * 21 20 19 23 23 F 1.39900 * 109.46956 * 299.99664 * 22 21 20 24 24 F 1.39899 * 109.47664 * 59.99726 * 22 21 20 25 25 H 4.40635 * 5.51388 * 179.97438 * 4 1 2 26 26 H 1.09004 * 109.47565 * 282.06415 * 3 2 1 27 27 H 1.09005 * 109.46691 * 162.06965 * 3 2 1 28 28 H 0.97000 * 119.99585 * 179.97438 * 8 7 5 29 29 H 1.07997 * 120.04709 * 359.97438 * 16 15 13 30 30 H 1.07993 * 119.84831 * 179.97438 * 17 16 15 31 31 H 1.08003 * 119.80235 * 179.74641 * 18 17 16 32 32 H 1.08002 * 119.95286 * 180.02562 * 19 18 17 33 33 H 1.09003 * 109.47251 * 179.97438 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1348 -1.0244 -0.9255 5 6 3.4783 -2.2635 -0.4552 6 1 4.1913 -2.8678 -0.9962 7 6 2.9092 -2.7437 0.7188 8 7 1.9137 -2.0950 1.2794 9 14 3.5598 -4.3112 1.4989 10 1 4.6760 -4.8462 0.6784 11 1 4.0507 -4.0155 2.8689 12 1 2.4704 -5.3179 1.5700 13 6 3.2464 -0.7477 -2.2398 14 8 3.0365 0.3801 -2.6438 15 6 3.6230 -1.8121 -3.1878 16 6 3.0879 -3.0962 -3.0519 17 6 3.4444 -4.0864 -3.9409 18 6 4.3313 -3.8156 -4.9706 19 6 4.8674 -2.5515 -5.1166 20 6 4.5208 -1.5426 -4.2305 21 8 5.0463 -0.3001 -4.3730 22 6 5.9530 -0.1000 -5.4592 23 9 7.0490 -0.9575 -5.3158 24 9 5.3018 -0.3735 -6.6668 25 1 -1.0498 -0.0003 -0.0001 26 1 3.0095 -0.2140 1.0050 27 1 3.0088 0.9786 -0.3164 28 1 1.5164 -2.4303 2.0984 29 1 2.3967 -3.3119 -2.2507 30 1 3.0308 -5.0784 -3.8349 31 1 4.6083 -4.5990 -5.6604 32 1 5.5577 -2.3483 -5.9220 33 1 6.2978 0.9341 -5.4589 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000311286614.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:34:17 Heat of formation + Delta-G solvation = -77.245539 kcal Electronic energy + Delta-G solvation = -23867.928138 eV Core-core repulsion = 19918.212803 eV Total energy + Delta-G solvation = -3949.715335 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 295.081 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -49.23366 -47.21960 -39.89945 -38.22979 -36.86079 -35.06460 -31.99581 -31.57601 -30.44337 -29.85396 -26.58943 -25.84504 -24.89680 -22.79760 -21.92986 -19.72562 -18.72235 -18.12322 -17.77888 -17.59055 -16.90084 -16.17335 -15.73894 -14.99486 -14.72926 -14.46586 -14.24314 -14.19633 -13.75021 -13.64302 -13.51606 -13.43339 -12.89765 -12.62772 -12.31648 -12.13818 -11.95959 -11.68776 -11.46827 -11.26469 -11.13748 -10.75341 -10.64916 -10.45252 -9.42215 -9.29498 -8.71918 -8.60309 -8.36348 -8.02103 -7.87474 -6.39886 -4.06218 1.51253 1.75655 2.84255 3.05698 3.16765 3.20165 3.57699 3.66573 3.89089 4.09477 4.28118 4.32340 4.43235 4.77778 4.85046 4.99188 5.13993 5.32519 5.47873 5.67550 5.74052 5.94030 6.05381 6.36371 6.50325 6.66555 6.72259 6.88628 6.92839 7.10085 7.20126 7.31837 7.45916 7.64038 8.28463 8.96552 9.01911 9.36556 9.78303 10.57094 Molecular weight = 295.08amu Principal moments of inertia in cm(-1) A = 0.017247 B = 0.005959 C = 0.005074 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1623.102381 B = 4697.940564 C = 5517.517309 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.277 4.277 2 C -0.093 4.093 3 C 0.243 3.757 4 N -0.431 5.431 5 C -0.339 4.339 6 H 0.101 0.899 7 C 0.038 3.962 8 N -0.855 5.855 9 Si 0.919 3.081 10 H -0.267 1.267 11 H -0.279 1.279 12 H -0.280 1.280 13 C 0.506 3.494 14 O -0.587 6.587 15 C -0.104 4.104 16 C -0.033 4.033 17 C -0.162 4.162 18 C -0.080 4.080 19 C -0.208 4.208 20 C 0.135 3.865 21 O -0.294 6.294 22 C 0.407 3.593 23 F -0.204 7.204 24 F -0.203 7.203 25 H 0.196 0.804 26 H 0.106 0.894 27 H 0.066 0.934 28 H 0.271 0.729 29 H 0.152 0.848 30 H 0.124 0.876 31 H 0.122 0.878 32 H 0.129 0.871 33 H 0.178 0.822 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.734 -1.369 -8.255 10.144 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.296 4.296 2 C -0.095 4.095 3 C 0.121 3.879 4 N -0.149 5.149 5 C -0.467 4.467 6 H 0.119 0.881 7 C -0.168 4.168 8 N -0.491 5.491 9 Si 0.745 3.255 10 H -0.191 1.191 11 H -0.205 1.205 12 H -0.206 1.206 13 C 0.295 3.705 14 O -0.472 6.472 15 C -0.107 4.107 16 C -0.052 4.052 17 C -0.180 4.180 18 C -0.099 4.099 19 C -0.227 4.227 20 C 0.090 3.910 21 O -0.210 6.210 22 C 0.316 3.684 23 F -0.186 7.186 24 F -0.185 7.185 25 H 0.214 0.786 26 H 0.124 0.876 27 H 0.084 0.916 28 H 0.082 0.918 29 H 0.170 0.830 30 H 0.142 0.858 31 H 0.140 0.860 32 H 0.147 0.853 33 H 0.194 0.806 Dipole moment (debyes) X Y Z Total from point charges 5.513 -0.683 -8.130 9.847 hybrid contribution 0.149 -1.242 0.305 1.287 sum 5.662 -1.925 -7.825 9.849 Atomic orbital electron populations 1.24142 0.95279 1.05579 1.04600 1.23046 0.94233 0.95598 0.96579 1.18039 0.84250 0.90339 0.95251 1.43489 1.55389 1.12050 1.03942 1.19731 1.24282 0.93554 1.09115 0.88146 1.25397 0.94774 0.99023 0.97622 1.69992 1.20601 1.38983 1.19507 0.85974 0.78950 0.81252 0.79315 1.19079 1.20484 1.20569 1.17829 0.82928 0.87497 0.82286 1.90655 1.56322 1.22207 1.78003 1.19450 0.99354 0.95792 0.96131 1.21585 0.96715 0.90010 0.96865 1.21068 1.00751 0.99774 0.96409 1.20921 0.96005 0.95497 0.97439 1.21306 1.05667 0.94280 1.01432 1.18886 0.94082 0.82851 0.95134 1.86793 1.57400 1.29794 1.47035 1.23421 0.76167 0.94367 0.74408 1.93074 1.55563 1.74809 1.95111 1.93070 1.82058 1.95447 1.47898 0.78647 0.87623 0.91568 0.91807 0.82997 0.85753 0.85999 0.85321 0.80588 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.28 -6.30 19.25 29.55 0.57 -5.73 16 2 C -0.09 -2.29 11.27 -37.13 -0.42 -2.71 16 3 C 0.24 5.92 5.11 -6.83 -0.03 5.88 16 4 N -0.43 -10.83 2.59 -119.15 -0.31 -11.14 16 5 C -0.34 -8.26 7.10 -14.99 -0.11 -8.36 16 6 H 0.10 2.39 6.19 -52.49 -0.33 2.07 16 7 C 0.04 0.91 5.11 -17.45 -0.09 0.82 16 8 N -0.85 -21.36 9.09 55.50 0.50 -20.85 16 9 Si 0.92 18.75 29.56 -169.99 -5.03 13.72 16 10 H -0.27 -5.36 7.11 56.52 0.40 -4.96 16 11 H -0.28 -5.74 7.11 56.52 0.40 -5.33 16 12 H -0.28 -5.75 7.11 56.52 0.40 -5.35 16 13 C 0.51 12.74 7.01 -12.52 -0.09 12.65 16 14 O -0.59 -16.01 15.82 -10.14 -0.16 -16.17 16 15 C -0.10 -2.29 5.12 -104.84 -0.54 -2.82 16 16 C -0.03 -0.65 7.77 -39.18 -0.30 -0.96 16 17 C -0.16 -2.62 10.02 -39.63 -0.40 -3.02 16 18 C -0.08 -1.22 10.03 -39.52 -0.40 -1.61 16 19 C -0.21 -3.51 8.25 -39.48 -0.33 -3.83 16 20 C 0.14 2.69 6.46 -38.68 -0.25 2.44 16 21 O -0.29 -5.56 9.23 -34.07 -0.31 -5.87 16 22 C 0.41 5.44 5.98 101.05 0.60 6.04 16 23 F -0.20 -2.81 15.58 2.25 0.04 -2.77 16 24 F -0.20 -2.84 15.58 2.25 0.04 -2.80 16 25 H 0.20 3.65 7.80 -54.10 -0.42 3.23 16 26 H 0.11 2.57 6.64 -51.93 -0.34 2.22 16 27 H 0.07 1.56 7.53 -51.93 -0.39 1.17 16 28 H 0.27 6.50 8.31 -40.82 -0.34 6.16 16 29 H 0.15 3.17 6.66 -52.49 -0.35 2.82 16 30 H 0.12 1.65 8.06 -52.49 -0.42 1.23 16 31 H 0.12 1.44 8.06 -52.48 -0.42 1.01 16 32 H 0.13 1.95 5.10 -52.49 -0.27 1.68 16 33 H 0.18 1.49 8.14 -51.93 -0.42 1.07 16 LS Contribution 299.73 15.07 4.52 4.52 Total: -1.00 -30.56 299.73 -4.99 -35.55 By element: Atomic # 1 Polarization: 9.52 SS G_CDS: -2.50 Total: 7.02 kcal Atomic # 6 Polarization: 0.56 SS G_CDS: -1.77 Total: -1.21 kcal Atomic # 7 Polarization: -32.18 SS G_CDS: 0.20 Total: -31.99 kcal Atomic # 8 Polarization: -21.56 SS G_CDS: -0.47 Total: -22.04 kcal Atomic # 9 Polarization: -5.65 SS G_CDS: 0.07 Total: -5.58 kcal Atomic # 14 Polarization: 18.75 SS G_CDS: -5.03 Total: 13.72 kcal Total LS contribution 4.52 Total: 4.52 kcal Total: -30.56 -4.99 -35.55 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000311286614.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.692 kcal (2) G-P(sol) polarization free energy of solvation -30.559 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.251 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.994 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.554 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.246 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds