Wall clock time and date at job start Tue Mar 31 2020 07:02:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13592 * 1 3 3 C 1.43205 * 179.97438 * 2 1 4 4 C 1.39616 * 119.95322 * 260.27929 * 3 2 1 5 5 C 1.38002 * 120.04147 * 179.72291 * 4 3 2 6 6 F 1.35102 * 120.02028 * 180.29443 * 5 4 3 7 7 C 1.39981 * 119.95208 * 0.55103 * 5 4 3 8 8 C 1.47496 * 120.04153 * 179.69957 * 7 5 4 9 9 O 1.21497 * 119.99988 * 270.02480 * 8 7 5 10 10 O 1.34743 * 120.00078 * 90.02254 * 8 7 5 11 11 C 1.45196 * 117.00133 * 180.02562 * 10 8 7 12 12 C 1.53002 * 109.46997 * 179.97438 * 11 10 8 13 13 C 1.53006 * 109.46939 * 180.02562 * 12 11 10 14 14 C 1.50702 * 109.46875 * 180.02562 * 13 12 11 15 15 H 1.07994 * 120.00182 * 359.97438 * 14 13 12 16 16 C 1.37874 * 119.99838 * 180.02562 * 14 13 12 17 17 N 1.31513 * 120.00014 * 179.97438 * 16 14 13 18 18 Si 1.86808 * 120.00017 * 359.97438 * 16 14 13 19 19 H 1.48500 * 109.47067 * 90.00057 * 18 16 14 20 20 H 1.48497 * 109.46926 * 210.00219 * 18 16 14 21 21 H 1.48498 * 109.46680 * 329.99916 * 18 16 14 22 22 C 1.39980 * 119.91767 * 359.72687 * 7 5 4 23 23 F 1.35102 * 120.02628 * 179.97438 * 22 7 5 24 24 C 1.38002 * 119.95324 * 359.97438 * 22 7 5 25 25 H 1.08003 * 119.98201 * 359.97438 * 4 3 2 26 26 H 1.08999 * 109.47160 * 300.00281 * 11 10 8 27 27 H 1.09003 * 109.47226 * 60.00013 * 11 10 8 28 28 H 1.08999 * 109.47414 * 300.00148 * 12 11 10 29 29 H 1.09003 * 109.47103 * 59.99960 * 12 11 10 30 30 H 1.08999 * 109.47181 * 300.00281 * 13 12 11 31 31 H 1.09000 * 109.46763 * 60.00029 * 13 12 11 32 32 H 0.97001 * 120.00278 * 179.97438 * 17 16 14 33 33 H 1.08001 * 119.97822 * 179.97438 * 24 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2650 0.2052 1.1923 5 6 4.6450 0.2005 1.1954 6 9 5.3190 0.3926 2.3504 7 6 5.3459 0.0019 0.0001 8 6 6.8208 0.0031 0.0000 9 8 7.4275 1.0416 -0.1725 10 8 7.4955 -1.1475 0.1913 11 6 8.9454 -1.0712 0.1793 12 6 9.5313 -2.4654 0.4116 13 6 11.0592 -2.3850 0.3996 14 6 11.6363 -3.7583 0.6278 15 1 10.9791 -4.6038 0.7678 16 6 13.0033 -3.9352 0.6589 17 7 13.5069 -5.1335 0.8586 18 14 14.1401 -2.4726 0.4175 19 1 14.4395 -1.8557 1.7346 20 1 15.4042 -2.9274 -0.2151 21 1 13.4799 -1.4721 -0.4592 22 6 4.6452 -0.1972 -1.1953 23 9 5.3194 -0.3885 -2.3503 24 6 3.2652 -0.1979 -1.1931 25 1 2.7238 0.3632 2.1135 26 1 9.2813 -0.6917 -0.7857 27 1 9.2805 -0.4003 0.9703 28 1 9.1953 -2.8446 1.3767 29 1 9.1962 -3.1367 -0.3791 30 1 11.3955 -2.0056 -0.5653 31 1 11.3938 -1.7138 1.1906 32 1 14.4686 -5.2581 0.8801 33 1 2.7242 -0.3511 -2.1153 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000756286274.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:02:34 Heat of formation + Delta-G solvation = -122.755063 kcal Electronic energy + Delta-G solvation = -21898.229416 eV Core-core repulsion = 17946.540640 eV Total energy + Delta-G solvation = -3951.688776 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 295.081 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -49.71498 -49.69356 -40.69479 -39.61273 -37.09539 -36.67348 -34.16298 -32.58737 -31.80966 -31.36454 -27.89467 -26.19297 -23.78496 -23.28716 -21.63730 -20.36916 -20.30599 -18.38402 -18.31683 -17.36637 -17.21541 -16.72663 -16.55976 -16.45749 -16.20797 -15.96094 -15.57195 -14.55030 -14.39452 -14.22239 -14.18932 -14.17250 -13.55500 -13.06592 -12.85065 -12.82520 -12.79824 -12.47196 -12.40042 -12.00418 -11.13879 -11.07170 -10.99407 -10.56284 -10.09327 -9.91687 -9.85194 -9.76225 -9.63446 -9.28351 -8.59269 -6.09347 -4.08757 -0.50499 0.12024 1.70469 1.82603 1.88779 2.35594 2.68487 2.85262 3.15311 3.28146 3.36012 3.38804 3.57353 3.92655 4.00747 4.20458 4.40676 4.43842 4.83717 4.85251 5.08484 5.13801 5.23534 5.33763 5.35389 5.69650 5.75697 6.09927 6.31941 6.48467 6.70158 6.71541 7.15766 7.27639 7.43155 7.70627 8.46751 8.94729 9.51873 11.03726 Molecular weight = 295.08amu Principal moments of inertia in cm(-1) A = 0.030351 B = 0.002769 C = 0.002746 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 922.311140 B =10109.416677 C =10193.640918 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.384 5.384 2 C 0.251 3.749 3 C 0.054 3.946 4 C -0.117 4.117 5 C 0.177 3.823 6 F -0.108 7.108 7 C -0.147 4.147 8 C 0.509 3.491 9 O -0.479 6.479 10 O -0.339 6.339 11 C 0.064 3.936 12 C -0.102 4.102 13 C -0.010 4.010 14 C -0.522 4.522 15 H 0.074 0.926 16 C 0.068 3.932 17 N -0.901 5.901 18 Si 0.879 3.121 19 H -0.276 1.276 20 H -0.287 1.287 21 H -0.265 1.265 22 C 0.177 3.823 23 F -0.108 7.108 24 C -0.117 4.117 25 H 0.165 0.835 26 H 0.072 0.928 27 H 0.072 0.928 28 H 0.068 0.932 29 H 0.068 0.932 30 H 0.020 0.980 31 H 0.015 0.985 32 H 0.264 0.736 33 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -22.748 12.381 -2.092 25.983 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.058 5.058 2 C -0.065 4.065 3 C 0.051 3.949 4 C -0.138 4.138 5 C 0.157 3.843 6 F -0.086 7.086 7 C -0.151 4.151 8 C 0.349 3.651 9 O -0.366 6.366 10 O -0.255 6.255 11 C -0.009 4.009 12 C -0.139 4.139 13 C -0.048 4.048 14 C -0.560 4.560 15 H 0.092 0.908 16 C -0.134 4.134 17 N -0.539 5.539 18 Si 0.706 3.294 19 H -0.202 1.202 20 H -0.213 1.213 21 H -0.190 1.190 22 C 0.157 3.843 23 F -0.086 7.086 24 C -0.138 4.138 25 H 0.183 0.817 26 H 0.090 0.910 27 H 0.090 0.910 28 H 0.087 0.913 29 H 0.087 0.913 30 H 0.038 0.962 31 H 0.034 0.966 32 H 0.074 0.926 33 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -24.040 12.568 -2.126 27.210 hybrid contribution 1.615 0.742 -0.100 1.780 sum -22.425 13.310 -2.226 26.172 Atomic orbital electron populations 1.81339 1.11536 1.06774 1.06180 1.25135 0.91961 0.94774 0.94670 1.15307 0.85009 1.01473 0.93119 1.21088 0.91477 1.01778 0.99463 1.16855 0.89073 0.98006 0.80408 1.91659 1.79969 1.91558 1.45402 1.19423 0.92336 1.09659 0.93635 1.20455 0.87387 0.83090 0.74134 1.90919 1.69320 1.32968 1.43420 1.86658 1.24494 1.33377 1.80996 1.23698 0.72764 1.01852 1.02588 1.21594 0.97733 0.91836 1.02760 1.19527 0.89827 0.98539 0.96879 1.21033 0.92307 0.92968 1.49719 0.90759 1.25016 0.98224 0.95701 0.94460 1.69904 1.12528 1.21594 1.49900 0.86786 0.80356 0.83317 0.78897 1.20187 1.21266 1.18960 1.16854 0.89073 0.97765 0.80648 1.91659 1.79958 1.91592 1.45379 1.21086 0.91473 1.01791 0.99451 0.81743 0.90972 0.90985 0.91332 0.91303 0.96194 0.96628 0.92611 0.81742 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.38 -3.31 18.54 41.83 0.78 -2.53 16 2 C 0.25 1.51 15.31 -22.47 -0.34 1.17 16 3 C 0.05 0.26 5.73 -106.94 -0.61 -0.35 16 4 C -0.12 -0.57 9.71 -39.15 -0.38 -0.95 16 5 C 0.18 1.42 7.28 -39.02 -0.28 1.14 16 6 F -0.11 -1.06 16.82 2.25 0.04 -1.02 16 7 C -0.15 -1.48 5.77 -104.82 -0.60 -2.09 16 8 C 0.51 7.21 6.66 34.50 0.23 7.44 16 9 O -0.48 -7.93 16.90 -19.26 -0.33 -8.26 16 10 O -0.34 -5.25 10.23 -40.61 -0.42 -5.66 16 11 C 0.06 1.06 5.48 37.16 0.20 1.26 16 12 C -0.10 -1.94 5.53 -26.73 -0.15 -2.09 16 13 C -0.01 -0.24 4.04 -27.88 -0.11 -0.35 16 14 C -0.52 -14.59 9.66 -34.44 -0.33 -14.92 16 15 H 0.07 2.22 7.99 -52.49 -0.42 1.80 16 16 C 0.07 1.94 5.47 -17.82 -0.10 1.84 16 17 N -0.90 -27.42 13.96 55.43 0.77 -26.64 16 18 Si 0.88 21.35 27.47 -169.99 -4.67 16.68 16 19 H -0.28 -6.58 7.11 56.52 0.40 -6.18 16 20 H -0.29 -6.91 7.11 56.52 0.40 -6.51 16 21 H -0.26 -6.16 6.54 56.52 0.37 -5.79 16 22 C 0.18 1.42 7.28 -39.02 -0.28 1.14 16 23 F -0.11 -1.06 16.82 2.25 0.04 -1.02 16 24 C -0.12 -0.57 9.71 -39.16 -0.38 -0.95 16 25 H 0.16 0.41 8.06 -52.48 -0.42 -0.02 16 26 H 0.07 1.17 8.14 -51.93 -0.42 0.75 16 27 H 0.07 1.16 8.14 -51.93 -0.42 0.74 16 28 H 0.07 1.30 8.14 -51.93 -0.42 0.88 16 29 H 0.07 1.31 8.14 -51.93 -0.42 0.88 16 30 H 0.02 0.45 7.20 -51.93 -0.37 0.08 16 31 H 0.02 0.35 7.57 -51.93 -0.39 -0.04 16 32 H 0.26 7.51 8.31 -40.82 -0.34 7.17 16 33 H 0.17 0.41 8.06 -52.49 -0.42 -0.02 16 LS Contribution 318.84 15.07 4.80 4.80 Total: -1.00 -32.59 318.84 -5.02 -37.61 By element: Atomic # 1 Polarization: -3.37 SS G_CDS: -2.89 Total: -6.26 kcal Atomic # 6 Polarization: -4.56 SS G_CDS: -3.15 Total: -7.71 kcal Atomic # 7 Polarization: -30.72 SS G_CDS: 1.55 Total: -29.18 kcal Atomic # 8 Polarization: -13.18 SS G_CDS: -0.74 Total: -13.92 kcal Atomic # 9 Polarization: -2.11 SS G_CDS: 0.08 Total: -2.03 kcal Atomic # 14 Polarization: 21.35 SS G_CDS: -4.67 Total: 16.68 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -32.59 -5.02 -37.61 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000756286274.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.144 kcal (2) G-P(sol) polarization free energy of solvation -32.594 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.739 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.016 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.611 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.755 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds