Wall clock time and date at job start Tue Mar 31 2020 08:08:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52989 * 1 3 3 C 1.52999 * 109.47583 * 2 1 4 4 H 1.09002 * 109.46715 * 304.26948 * 3 2 1 5 5 C 1.50699 * 109.47423 * 184.27262 * 3 2 1 6 6 H 1.07999 * 119.99333 * 239.99478 * 5 3 2 7 7 C 1.37871 * 120.00296 * 59.99892 * 5 3 2 8 8 N 1.31518 * 119.99804 * 359.97438 * 7 5 3 9 9 Si 1.86804 * 119.99922 * 180.02562 * 7 5 3 10 10 H 1.48492 * 109.47026 * 59.99735 * 9 7 5 11 11 H 1.48501 * 109.46857 * 179.97438 * 9 7 5 12 12 H 1.48495 * 109.46981 * 299.99549 * 9 7 5 13 13 N 1.46903 * 109.47001 * 64.26456 * 3 2 1 14 14 C 1.46897 * 110.99735 * 205.84059 * 13 3 2 15 15 C 1.50704 * 109.47095 * 174.82583 * 14 13 3 16 16 C 1.37837 * 119.94013 * 105.02003 * 15 14 13 17 17 C 1.39688 * 119.87374 * 180.02562 * 16 15 14 18 18 C 1.47592 * 120.12313 * 179.97438 * 17 16 15 19 19 O 1.21486 * 120.00166 * 359.97438 * 18 17 16 20 20 O 1.34732 * 120.00066 * 179.97438 * 18 17 16 21 21 C 1.45207 * 116.99926 * 180.02562 * 20 18 17 22 22 C 1.39728 * 119.75347 * 359.97438 * 17 16 15 23 23 C 1.37800 * 119.87423 * 359.97438 * 22 17 16 24 24 C 1.38648 * 119.93600 * 285.00431 * 15 14 13 25 25 F 1.35105 * 119.87627 * 359.71500 * 24 15 14 26 26 H 1.08999 * 109.47541 * 174.87578 * 1 2 3 27 27 H 1.09003 * 109.47552 * 294.87847 * 1 2 3 28 28 H 1.09004 * 109.47268 * 54.87683 * 1 2 3 29 29 H 1.09002 * 109.47233 * 239.99656 * 2 1 3 30 30 H 1.08999 * 109.47370 * 120.00087 * 2 1 3 31 31 H 0.96999 * 119.99333 * 180.02562 * 8 7 5 32 32 H 1.00894 * 110.99326 * 81.89255 * 13 3 2 33 33 H 1.08997 * 109.47715 * 54.82625 * 14 13 3 34 34 H 1.09005 * 109.47486 * 294.82400 * 14 13 3 35 35 H 1.07998 * 120.06530 * 359.97438 * 16 15 14 36 36 H 1.08996 * 109.46497 * 300.00000 * 21 20 18 37 37 H 1.08993 * 109.46949 * 59.99897 * 21 20 18 38 38 H 1.09002 * 109.46898 * 180.02562 * 21 20 18 39 39 H 1.08003 * 120.06128 * 179.97438 * 22 17 16 40 40 H 1.07999 * 119.93435 * 180.02562 * 23 22 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 1 1.6155 1.9779 -0.8493 5 6 3.5433 1.4437 -0.1059 6 1 4.1391 1.8917 0.6756 7 6 4.1578 0.8732 -1.2002 8 7 3.4321 0.3273 -2.1516 9 14 6.0213 0.8742 -1.3310 10 1 6.5990 0.1443 -0.1740 11 1 6.4293 0.2044 -2.5920 12 1 6.5167 2.2740 -1.3307 13 7 1.6363 2.1046 1.2476 14 6 1.5404 3.5589 1.0645 15 6 1.0033 4.1894 2.3236 16 6 1.8516 4.8776 3.1642 17 6 1.3525 5.4610 4.3312 18 6 2.2560 6.1987 5.2355 19 8 3.4363 6.2989 4.9659 20 8 1.7719 6.7608 6.3602 21 6 2.7179 7.4714 7.2020 22 6 -0.0054 5.3437 4.6391 23 6 -0.8445 4.6543 3.7908 24 6 -0.3432 4.0764 2.6340 25 9 -1.1714 3.4060 1.8034 26 1 -0.3634 -1.0235 -0.0918 27 1 -0.3634 0.4323 0.9323 28 1 -0.3634 0.5913 -0.8406 29 1 1.8933 -0.5139 -0.8900 30 1 1.8933 -0.5138 0.8900 31 1 3.8645 -0.0744 -2.9213 32 1 2.2690 1.8758 1.9994 33 1 0.8690 3.7772 0.2341 34 1 2.5290 3.9640 0.8485 35 1 2.9004 4.9649 2.9216 36 1 3.4987 6.7853 7.5302 37 1 3.1660 8.2878 6.6359 38 1 2.1990 7.8738 8.0720 39 1 -0.3965 5.7924 5.5402 40 1 -1.8942 4.5633 4.0277 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000573576405.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 08:08:35 Heat of formation + Delta-G solvation = -113.661144 kcal Electronic energy + Delta-G solvation = -23422.100721 eV Core-core repulsion = 19730.099687 eV Total energy + Delta-G solvation = -3692.001034 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 295.137 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -48.73067 -40.66586 -38.84393 -36.56420 -36.19541 -33.28654 -31.62195 -31.09705 -30.19722 -27.92273 -26.64637 -24.57118 -23.98669 -22.63079 -21.88809 -20.60859 -19.51668 -17.82877 -17.59446 -17.06270 -16.70100 -16.52546 -16.02993 -15.49270 -14.84096 -14.65987 -14.10570 -14.02577 -13.74425 -13.58554 -13.28496 -13.15941 -12.93998 -12.62629 -12.35924 -12.27592 -11.90432 -11.73924 -11.24717 -11.17608 -11.01798 -10.91669 -10.86416 -10.67961 -10.63069 -10.16147 -9.61311 -9.56845 -9.12341 -9.06440 -8.69404 -8.39109 -7.33240 -6.01241 -4.14492 0.51661 1.15382 2.36299 2.48312 3.28376 3.33468 3.36315 3.55764 4.23384 4.38699 4.50992 4.65755 4.76346 4.86447 4.94676 5.06514 5.16521 5.23721 5.25610 5.50672 5.73845 5.79248 5.91893 6.00776 6.09672 6.19032 6.29596 6.41731 6.47316 6.53457 6.73969 6.75265 7.12259 7.20119 7.41462 7.57073 7.57815 7.76370 8.05024 8.10192 8.28211 8.59702 8.96965 9.53434 10.99103 Molecular weight = 295.14amu Principal moments of inertia in cm(-1) A = 0.015339 B = 0.004123 C = 0.003346 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1824.976192 B = 6790.069159 C = 8365.334764 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.105 4.105 3 C 0.217 3.783 4 H 0.033 0.967 5 C -0.549 4.549 6 H 0.053 0.947 7 C 0.069 3.931 8 N -0.884 5.884 9 Si 0.889 3.111 10 H -0.277 1.277 11 H -0.287 1.287 12 H -0.278 1.278 13 N -0.682 5.682 14 C 0.103 3.897 15 C -0.116 4.116 16 C -0.020 4.020 17 C -0.148 4.148 18 C 0.512 3.488 19 O -0.504 6.504 20 O -0.357 6.357 21 C 0.037 3.963 22 C -0.040 4.040 23 C -0.176 4.176 24 C 0.164 3.836 25 F -0.119 7.119 26 H 0.024 0.976 27 H 0.047 0.953 28 H 0.036 0.964 29 H 0.090 0.910 30 H 0.030 0.970 31 H 0.262 0.738 32 H 0.329 0.671 33 H 0.077 0.923 34 H 0.046 0.954 35 H 0.145 0.855 36 H 0.064 0.936 37 H 0.063 0.937 38 H 0.101 0.899 39 H 0.143 0.857 40 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.464 11.680 14.907 20.356 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.193 4.193 2 C -0.144 4.144 3 C 0.110 3.890 4 H 0.051 0.949 5 C -0.588 4.588 6 H 0.072 0.928 7 C -0.134 4.134 8 N -0.522 5.522 9 Si 0.717 3.283 10 H -0.203 1.203 11 H -0.212 1.212 12 H -0.204 1.204 13 N -0.311 5.311 14 C -0.027 4.027 15 C -0.117 4.117 16 C -0.039 4.039 17 C -0.150 4.150 18 C 0.357 3.643 19 O -0.393 6.393 20 O -0.274 6.274 21 C -0.057 4.057 22 C -0.059 4.059 23 C -0.195 4.195 24 C 0.143 3.857 25 F -0.097 7.097 26 H 0.043 0.957 27 H 0.066 0.934 28 H 0.056 0.944 29 H 0.109 0.891 30 H 0.049 0.951 31 H 0.072 0.928 32 H 0.146 0.854 33 H 0.095 0.905 34 H 0.064 0.936 35 H 0.163 0.837 36 H 0.082 0.918 37 H 0.082 0.918 38 H 0.120 0.880 39 H 0.161 0.839 40 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -7.792 11.487 14.503 20.075 hybrid contribution 2.079 0.171 -0.208 2.096 sum -5.713 11.658 14.295 19.310 Atomic orbital electron populations 1.21681 0.98879 0.98236 1.00482 1.21488 0.92155 0.99031 1.01694 1.19165 0.92741 0.91237 0.85900 0.94881 1.21824 0.92626 1.38411 1.05952 0.92835 1.24919 0.97997 0.94881 0.95597 1.69870 1.35021 1.37793 1.09530 0.86708 0.85988 0.78230 0.77380 1.20262 1.21220 1.20357 1.60958 1.55514 1.04410 1.10250 1.20707 0.99539 0.90805 0.91640 1.20221 0.91813 1.00094 0.99595 1.21124 1.00574 0.91796 0.90411 1.19003 0.93490 1.05686 0.96797 1.21138 0.86879 0.76439 0.79812 1.90861 1.17499 1.57395 1.73530 1.86533 1.42403 1.64841 1.33616 1.23273 0.92942 0.96143 0.93322 1.21179 0.91449 0.94823 0.98404 1.21104 1.01510 1.02080 0.94771 1.17877 0.87807 0.91489 0.88480 1.91566 1.70813 1.77135 1.70173 0.95722 0.93421 0.94447 0.89130 0.95092 0.92778 0.85441 0.90483 0.93551 0.83681 0.91771 0.91814 0.88021 0.83905 0.84057 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.82 9.73 37.15 0.36 -2.46 16 2 C -0.11 -2.51 5.45 -26.74 -0.15 -2.66 16 3 C 0.22 5.28 1.98 -68.86 -0.14 5.15 16 4 H 0.03 0.89 7.70 -51.93 -0.40 0.49 16 5 C -0.55 -14.59 8.47 -34.44 -0.29 -14.89 16 6 H 0.05 1.41 7.73 -52.49 -0.41 1.00 16 7 C 0.07 1.87 5.29 -17.82 -0.09 1.78 16 8 N -0.88 -24.80 11.29 55.43 0.63 -24.18 16 9 Si 0.89 21.09 29.54 -169.99 -5.02 16.07 16 10 H -0.28 -6.55 7.11 56.52 0.40 -6.15 16 11 H -0.29 -6.76 7.11 56.52 0.40 -6.36 16 12 H -0.28 -6.58 7.11 56.52 0.40 -6.17 16 13 N -0.68 -14.03 5.72 -109.22 -0.63 -14.65 16 14 C 0.10 1.87 5.31 -4.98 -0.03 1.84 16 15 C -0.12 -1.77 5.44 -104.62 -0.57 -2.34 16 16 C -0.02 -0.29 9.21 -39.19 -0.36 -0.65 16 17 C -0.15 -1.89 5.87 -104.98 -0.62 -2.50 16 18 C 0.51 6.69 7.89 34.55 0.27 6.96 16 19 O -0.50 -7.94 16.13 -19.26 -0.31 -8.25 16 20 O -0.36 -3.78 9.81 -40.58 -0.40 -4.17 16 21 C 0.04 0.28 10.57 101.05 1.07 1.35 16 22 C -0.04 -0.42 9.61 -39.18 -0.38 -0.80 16 23 C -0.18 -1.96 10.01 -39.58 -0.40 -2.35 16 24 C 0.16 2.33 7.25 -39.27 -0.28 2.05 16 25 F -0.12 -1.90 16.74 2.25 0.04 -1.86 16 26 H 0.02 0.46 8.14 -51.93 -0.42 0.04 16 27 H 0.05 0.96 7.88 -51.93 -0.41 0.55 16 28 H 0.04 0.78 8.14 -51.93 -0.42 0.36 16 29 H 0.09 2.41 5.97 -51.93 -0.31 2.10 16 30 H 0.03 0.73 8.14 -51.93 -0.42 0.31 16 31 H 0.26 7.06 8.31 -40.82 -0.34 6.72 16 32 H 0.33 6.77 8.45 -39.29 -0.33 6.44 16 33 H 0.08 1.45 7.86 -51.93 -0.41 1.04 16 34 H 0.05 0.88 7.92 -51.93 -0.41 0.47 16 35 H 0.15 2.12 7.58 -52.49 -0.40 1.73 16 36 H 0.06 0.49 8.14 -51.93 -0.42 0.07 16 37 H 0.06 0.48 8.14 -51.93 -0.42 0.06 16 38 H 0.10 0.45 8.14 -51.93 -0.42 0.03 16 39 H 0.14 1.13 7.61 -52.48 -0.40 0.73 16 40 H 0.14 1.21 8.06 -52.49 -0.42 0.79 16 LS Contribution 346.54 15.07 5.22 5.22 Total: -1.00 -29.46 346.54 -7.63 -37.09 By element: Atomic # 1 Polarization: 9.82 SS G_CDS: -5.57 Total: 4.25 kcal Atomic # 6 Polarization: -7.93 SS G_CDS: -1.60 Total: -9.52 kcal Atomic # 7 Polarization: -38.83 SS G_CDS: 0.00 Total: -38.83 kcal Atomic # 8 Polarization: -11.72 SS G_CDS: -0.71 Total: -12.43 kcal Atomic # 9 Polarization: -1.90 SS G_CDS: 0.04 Total: -1.86 kcal Atomic # 14 Polarization: 21.09 SS G_CDS: -5.02 Total: 16.07 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -29.46 -7.63 -37.09 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000573576405.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.567 kcal (2) G-P(sol) polarization free energy of solvation -29.462 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.029 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.632 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.094 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.661 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds