Wall clock time and date at job start Tue Mar 31 2020 07:02:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42901 * 114.00194 * 2 1 4 4 C 1.53000 * 109.46999 * 180.02562 * 3 2 1 5 5 N 1.46506 * 109.46992 * 64.99670 * 4 3 2 6 6 C 1.46499 * 119.99936 * 90.00137 * 5 4 3 7 7 C 1.50703 * 109.47126 * 89.99796 * 6 5 4 8 8 H 1.08002 * 119.99820 * 359.97438 * 7 6 5 9 9 C 1.37876 * 119.99889 * 180.02562 * 7 6 5 10 10 N 1.31518 * 120.00192 * 359.97438 * 9 7 6 11 11 Si 1.86806 * 120.00045 * 179.97438 * 9 7 6 12 12 H 1.48497 * 109.46980 * 0.02562 * 11 9 7 13 13 H 1.48497 * 109.47015 * 119.99649 * 11 9 7 14 14 H 1.48496 * 109.47036 * 240.00093 * 11 9 7 15 15 C 1.34773 * 119.99969 * 269.72101 * 5 4 3 16 16 O 1.21281 * 120.00220 * 0.02562 * 15 5 4 17 17 C 1.50706 * 120.00080 * 180.02562 * 15 5 4 18 18 C 1.50690 * 109.47185 * 180.02562 * 17 15 5 19 19 C 1.38269 * 119.98886 * 269.72682 * 18 17 15 20 20 C 1.38222 * 120.05386 * 179.72921 * 19 18 17 21 21 C 1.38230 * 120.02407 * 0.54499 * 20 19 18 22 22 C 1.38435 * 119.97242 * 359.72971 * 21 20 19 23 23 F 1.35097 * 120.02442 * 180.02562 * 22 21 20 24 24 C 1.38180 * 119.98777 * 90.00461 * 18 17 15 25 25 H 1.09005 * 109.47031 * 300.00496 * 1 2 3 26 26 H 1.08996 * 109.47115 * 59.99818 * 1 2 3 27 27 H 1.08998 * 109.47832 * 180.02562 * 1 2 3 28 28 H 1.08992 * 109.47320 * 59.99819 * 3 2 1 29 29 H 1.08998 * 109.46759 * 299.99542 * 3 2 1 30 30 H 1.09000 * 109.46884 * 305.00285 * 4 3 2 31 31 H 1.09000 * 109.46955 * 184.99601 * 4 3 2 32 32 H 1.08994 * 109.47173 * 210.00167 * 6 5 4 33 33 H 1.09005 * 109.47077 * 330.00338 * 6 5 4 34 34 H 0.96995 * 119.99689 * 179.97438 * 10 9 7 35 35 H 1.09004 * 109.46762 * 300.00389 * 17 15 5 36 36 H 1.08998 * 109.46924 * 59.99727 * 17 15 5 37 37 H 1.08003 * 119.97421 * 359.97438 * 19 18 17 38 38 H 1.07997 * 119.99156 * 180.27680 * 20 19 18 39 39 H 1.07997 * 120.00927 * 179.74870 * 21 20 19 40 40 H 1.07998 * 120.01297 * 359.97154 * 24 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1846 -0.0006 5 7 3.9756 0.5642 -1.2528 6 6 4.2864 1.4004 -2.4149 7 6 5.7443 1.7807 -2.3846 8 1 6.3761 1.4346 -1.5800 9 6 6.2713 2.5715 -3.3836 10 7 5.5018 2.9934 -4.3632 11 14 8.0783 3.0435 -3.3458 12 1 8.7213 2.4452 -2.1484 13 1 8.7477 2.5379 -4.5711 14 1 8.2025 4.5222 -3.2881 15 6 4.1001 -0.7753 -1.3338 16 8 3.8473 -1.4673 -0.3704 17 6 4.5534 -1.4134 -2.6216 18 6 4.6087 -2.9094 -2.4488 19 6 5.7751 -3.5124 -2.0153 20 6 5.8255 -4.8839 -1.8509 21 6 4.7132 -5.6554 -2.1305 22 6 3.5467 -5.0534 -2.5700 23 9 2.4588 -5.8063 -2.8431 24 6 3.4955 -3.6786 -2.7290 25 1 -0.3633 0.5139 0.8900 26 1 -0.3633 0.5138 -0.8899 27 1 -0.3635 -1.0276 0.0005 28 1 1.6887 1.8464 0.8899 29 1 1.6887 1.8463 -0.8900 30 1 3.8514 0.5680 0.8409 31 1 3.9786 2.1764 0.0889 32 1 4.0745 0.8455 -3.3288 33 1 3.6750 2.3024 -2.3873 34 1 5.8725 3.5500 -5.0657 35 1 3.8505 -1.1656 -3.4170 36 1 5.5438 -1.0406 -2.8829 37 1 6.6462 -2.9109 -1.8012 38 1 6.7357 -5.3533 -1.5080 39 1 4.7542 -6.7274 -2.0059 40 1 2.5859 -3.2078 -3.0714 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000071141073.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:02:54 Heat of formation + Delta-G solvation = -106.094369 kcal Electronic energy + Delta-G solvation = -23918.686077 eV Core-core repulsion = 20227.013163 eV Total energy + Delta-G solvation = -3691.672914 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 295.137 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -48.70455 -39.53273 -38.38291 -37.23710 -34.89778 -32.77635 -32.42092 -30.34855 -29.91529 -27.40320 -26.91232 -25.83736 -23.04644 -22.73378 -22.45031 -21.21635 -18.38707 -16.98047 -16.72243 -16.40552 -16.12859 -16.10107 -15.91538 -15.53876 -15.33518 -15.03284 -14.57826 -14.37321 -14.08814 -13.64329 -13.09186 -12.93926 -12.74355 -12.40025 -12.21386 -11.87878 -11.78549 -11.68282 -11.51949 -11.31225 -11.10502 -10.99253 -10.87459 -10.73327 -10.64161 -10.17547 -9.76749 -9.34407 -9.05384 -8.69164 -8.58762 -8.38086 -7.67061 -6.22477 -4.30621 1.39408 1.44351 3.18445 3.27756 3.31122 3.54862 3.71358 4.06597 4.19103 4.31628 4.44154 4.89105 5.00254 5.10555 5.22242 5.38287 5.44331 5.47130 5.51791 5.58357 5.64075 5.65889 5.77400 5.82827 5.86038 5.96542 6.10594 6.24816 6.31104 6.32320 6.41267 6.50001 6.76337 6.80353 7.11202 7.16302 7.45930 7.60719 7.73539 8.02036 8.39051 8.77352 9.13311 9.38796 10.83836 Molecular weight = 295.14amu Principal moments of inertia in cm(-1) A = 0.011088 B = 0.005504 C = 0.004054 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2524.686020 B = 5085.700736 C = 6904.387897 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.369 6.369 3 C 0.045 3.955 4 C 0.123 3.877 5 N -0.596 5.596 6 C 0.236 3.764 7 C -0.539 4.539 8 H 0.062 0.938 9 C 0.065 3.935 10 N -0.891 5.891 11 Si 0.895 3.105 12 H -0.272 1.272 13 H -0.282 1.282 14 H -0.283 1.283 15 C 0.525 3.475 16 O -0.551 6.551 17 C -0.103 4.103 18 C -0.018 4.018 19 C -0.116 4.116 20 C -0.092 4.092 21 C -0.164 4.164 22 C 0.093 3.907 23 F -0.146 7.146 24 C -0.139 4.139 25 H 0.033 0.967 26 H 0.035 0.965 27 H 0.079 0.921 28 H 0.048 0.952 29 H 0.049 0.951 30 H 0.079 0.921 31 H 0.092 0.908 32 H 0.038 0.962 33 H 0.033 0.967 34 H 0.265 0.735 35 H 0.099 0.901 36 H 0.116 0.884 37 H 0.128 0.872 38 H 0.129 0.871 39 H 0.129 0.871 40 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.093 -8.478 3.698 10.115 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.287 6.287 3 C -0.033 4.033 4 C 0.000 4.000 5 N -0.328 5.328 6 C 0.116 3.884 7 C -0.578 4.578 8 H 0.080 0.920 9 C -0.138 4.138 10 N -0.529 5.529 11 Si 0.723 3.277 12 H -0.196 1.196 13 H -0.208 1.208 14 H -0.209 1.209 15 C 0.313 3.687 16 O -0.430 6.430 17 C -0.143 4.143 18 C -0.019 4.019 19 C -0.134 4.134 20 C -0.110 4.110 21 C -0.183 4.183 22 C 0.074 3.926 23 F -0.125 7.125 24 C -0.158 4.158 25 H 0.052 0.948 26 H 0.054 0.946 27 H 0.098 0.902 28 H 0.066 0.934 29 H 0.068 0.932 30 H 0.098 0.902 31 H 0.110 0.890 32 H 0.056 0.944 33 H 0.051 0.949 34 H 0.075 0.925 35 H 0.117 0.883 36 H 0.134 0.866 37 H 0.146 0.854 38 H 0.147 0.853 39 H 0.147 0.853 40 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -4.158 -8.901 4.014 10.612 hybrid contribution 0.494 0.715 -0.252 0.905 sum -3.663 -8.186 3.761 9.725 Atomic orbital electron populations 1.22668 0.82562 1.02101 0.99187 1.88126 1.18177 1.27264 1.95160 1.23057 0.95537 0.85039 0.99685 1.21283 0.90932 0.99328 0.88500 1.48060 1.64997 1.05957 1.13740 1.19429 0.96116 0.90284 0.82547 1.21564 0.94720 1.32059 1.09407 0.91957 1.24949 0.98199 0.95510 0.95115 1.69930 1.35701 1.35192 1.12085 0.86482 0.84748 0.78341 0.78174 1.19629 1.20794 1.20881 1.20051 0.77238 0.82293 0.89145 1.90636 1.51127 1.62304 1.38908 1.20731 1.05744 0.90100 0.97707 1.19378 0.92559 0.94869 0.95103 1.21125 0.98217 0.94678 0.99370 1.20910 0.97722 0.93643 0.98771 1.21012 0.92693 1.00581 1.04040 1.17628 0.83771 0.89091 1.02075 1.91461 1.53120 1.76194 1.91705 1.20972 0.99757 0.91689 1.03413 0.94793 0.94630 0.90227 0.93375 0.93241 0.90231 0.88994 0.94389 0.94854 0.92547 0.88268 0.86593 0.85359 0.85335 0.85338 0.85121 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.43 11.01 101.05 1.11 1.54 16 2 O -0.37 -6.63 9.52 -42.24 -0.40 -7.03 16 3 C 0.04 0.73 6.28 37.16 0.23 0.96 16 4 C 0.12 2.24 5.86 -4.04 -0.02 2.22 16 5 N -0.60 -12.26 2.44 -175.05 -0.43 -12.69 16 6 C 0.24 5.36 4.96 -5.19 -0.03 5.33 16 7 C -0.54 -13.36 9.26 -34.44 -0.32 -13.68 16 8 H 0.06 1.57 7.81 -52.49 -0.41 1.16 16 9 C 0.07 1.66 5.46 -17.82 -0.10 1.57 16 10 N -0.89 -23.75 13.29 55.43 0.74 -23.02 16 11 Si 0.90 19.84 29.54 -169.99 -5.02 14.82 16 12 H -0.27 -5.99 7.11 56.52 0.40 -5.59 16 13 H -0.28 -6.23 7.11 56.52 0.40 -5.83 16 14 H -0.28 -6.28 7.11 56.52 0.40 -5.87 16 15 C 0.53 10.85 7.30 -10.98 -0.08 10.77 16 16 O -0.55 -12.55 14.85 -1.45 -0.02 -12.57 16 17 C -0.10 -1.87 4.38 -29.04 -0.13 -1.99 16 18 C -0.02 -0.31 4.37 -104.64 -0.46 -0.77 16 19 C -0.12 -1.76 9.70 -39.58 -0.38 -2.14 16 20 C -0.09 -1.21 10.04 -39.59 -0.40 -1.61 16 21 C -0.16 -2.21 10.03 -39.51 -0.40 -2.60 16 22 C 0.09 1.43 7.30 -39.42 -0.29 1.14 16 23 F -0.15 -2.23 17.27 2.25 0.04 -2.19 16 24 C -0.14 -2.26 9.68 -39.51 -0.38 -2.64 16 25 H 0.03 0.39 8.14 -51.93 -0.42 -0.03 16 26 H 0.04 0.44 8.14 -51.93 -0.42 0.02 16 27 H 0.08 1.00 8.14 -51.93 -0.42 0.57 16 28 H 0.05 0.65 8.14 -51.93 -0.42 0.23 16 29 H 0.05 0.80 8.14 -51.93 -0.42 0.38 16 30 H 0.08 1.50 7.41 -51.93 -0.38 1.11 16 31 H 0.09 1.57 8.07 -51.93 -0.42 1.15 16 32 H 0.04 0.89 6.45 -51.93 -0.33 0.55 16 33 H 0.03 0.79 8.07 -51.93 -0.42 0.37 16 34 H 0.26 6.73 8.31 -40.82 -0.34 6.39 16 35 H 0.10 1.71 7.35 -51.93 -0.38 1.32 16 36 H 0.12 2.13 7.92 -51.93 -0.41 1.72 16 37 H 0.13 1.82 8.06 -52.48 -0.42 1.39 16 38 H 0.13 1.29 8.06 -52.49 -0.42 0.87 16 39 H 0.13 1.40 8.06 -52.49 -0.42 0.97 16 40 H 0.13 2.01 8.06 -52.49 -0.42 1.59 16 LS Contribution 348.20 15.07 5.25 5.25 Total: -1.00 -29.66 348.20 -7.18 -36.84 By element: Atomic # 1 Polarization: 8.19 SS G_CDS: -5.70 Total: 2.49 kcal Atomic # 6 Polarization: -0.27 SS G_CDS: -1.63 Total: -1.90 kcal Atomic # 7 Polarization: -36.01 SS G_CDS: 0.31 Total: -35.70 kcal Atomic # 8 Polarization: -19.18 SS G_CDS: -0.42 Total: -19.60 kcal Atomic # 9 Polarization: -2.23 SS G_CDS: 0.04 Total: -2.19 kcal Atomic # 14 Polarization: 19.84 SS G_CDS: -5.02 Total: 14.82 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -29.66 -7.18 -36.84 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000071141073.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.255 kcal (2) G-P(sol) polarization free energy of solvation -29.657 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.911 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.183 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.840 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.094 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds