Wall clock time and date at job start Tue Mar 31 2020 07:11:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 C 1.52999 * 109.47159 * 2 1 4 4 C 1.52996 * 109.46622 * 120.00238 * 2 1 3 5 5 N 1.46504 * 109.47484 * 66.75102 * 4 2 1 6 6 C 1.46505 * 119.99434 * 277.35221 * 5 4 2 7 7 C 1.50694 * 109.46735 * 269.99406 * 6 5 4 8 8 H 1.07999 * 120.00770 * 0.02562 * 7 6 5 9 9 C 1.37881 * 119.99667 * 180.02562 * 7 6 5 10 10 N 1.31510 * 120.00480 * 0.02562 * 9 7 6 11 11 Si 1.86807 * 119.99778 * 180.02562 * 9 7 6 12 12 H 1.48504 * 109.46789 * 90.00007 * 11 9 7 13 13 H 1.48505 * 109.47015 * 209.99832 * 11 9 7 14 14 H 1.48502 * 109.47194 * 329.99996 * 11 9 7 15 15 C 1.34774 * 119.99983 * 97.34665 * 5 4 2 16 16 O 1.21565 * 119.99442 * 186.38175 * 15 5 4 17 17 C 1.47778 * 120.00357 * 6.38480 * 15 5 4 18 18 C 1.40091 * 120.54470 * 315.76706 * 17 15 5 19 19 C 1.38249 * 118.30569 * 179.97438 * 18 17 15 20 20 C 1.38557 * 119.29677 * 359.97438 * 19 18 17 21 21 Cl 1.73598 * 119.47910 * 179.97438 * 20 19 18 22 22 N 1.32044 * 121.04442 * 0.27765 * 20 19 18 23 23 C 1.31692 * 121.85788 * 359.42813 * 22 20 19 24 24 H 1.09007 * 109.46573 * 59.99790 * 1 2 3 25 25 H 1.08996 * 109.47351 * 179.97438 * 1 2 3 26 26 H 1.09001 * 109.46817 * 300.00298 * 1 2 3 27 27 H 1.09001 * 109.46817 * 239.99702 * 2 1 3 28 28 H 1.09005 * 109.46491 * 180.02562 * 3 2 1 29 29 H 1.08993 * 109.47025 * 299.99864 * 3 2 1 30 30 H 1.08994 * 109.47158 * 60.00311 * 3 2 1 31 31 H 1.09001 * 109.47286 * 306.74686 * 4 2 1 32 32 H 1.09006 * 109.46670 * 186.74659 * 4 2 1 33 33 H 1.08997 * 109.47451 * 29.99863 * 6 5 4 34 34 H 1.09001 * 109.46494 * 150.00121 * 6 5 4 35 35 H 0.96997 * 120.00515 * 180.02562 * 10 9 7 36 36 H 1.07996 * 120.84542 * 359.95209 * 18 17 15 37 37 H 1.08003 * 120.35426 * 180.02562 * 19 18 17 38 38 H 1.08001 * 119.70536 * 180.31674 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0399 -0.7213 1.2492 5 7 1.6887 -2.1414 1.1708 6 6 0.3518 -2.5884 1.5700 7 6 0.3536 -2.9290 3.0379 8 1 1.2597 -2.8228 3.6159 9 6 -0.8017 -3.3763 3.6432 10 7 -1.9051 -3.5061 2.9394 11 14 -0.7997 -3.7979 5.4630 12 1 -1.1499 -2.5892 6.2515 13 1 -1.7977 -4.8660 5.7248 14 1 0.5500 -4.2736 5.8595 15 6 2.5953 -3.0366 0.7314 16 8 2.2702 -4.1947 0.5559 17 6 3.9846 -2.6103 0.4630 18 6 4.2430 -1.4188 -0.2270 19 6 5.5601 -1.0642 -0.4523 20 6 6.5729 -1.8904 0.0075 21 17 8.2284 -1.4501 -0.2734 22 7 6.2987 -3.0105 0.6508 23 6 5.0604 -3.3871 0.8939 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3634 -1.0276 -0.0005 26 1 -0.3633 0.5139 0.8900 27 1 1.8934 -0.5139 -0.8900 28 1 3.1301 1.4424 -0.0005 29 1 1.6768 1.9563 -0.8899 30 1 1.6768 1.9563 0.8900 31 1 1.5813 -0.2820 2.1351 32 1 3.1233 -0.6179 1.3117 33 1 -0.3686 -1.7921 1.3826 34 1 0.0763 -3.4709 0.9925 35 1 -2.7179 -3.8204 3.3653 36 1 3.4339 -0.7934 -0.5743 37 1 5.7972 -0.1524 -0.9804 38 1 4.8760 -4.3078 1.4277 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000037979283.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:11:34 Heat of formation + Delta-G solvation = -2.134744 kcal Electronic energy + Delta-G solvation = -21968.243888 eV Core-core repulsion = 18643.989465 eV Total energy + Delta-G solvation = -3324.254422 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 296.103 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -40.75101 -38.85049 -36.79529 -36.67485 -33.70102 -33.01272 -32.28736 -31.22955 -27.97730 -26.92306 -25.84858 -24.44010 -23.81733 -22.48199 -20.51188 -19.12053 -17.66809 -16.99634 -16.73057 -16.54924 -15.64763 -14.97965 -14.72947 -14.51741 -14.35177 -14.21770 -13.61441 -13.32359 -12.98694 -12.75787 -12.37396 -12.20549 -12.14454 -11.80034 -11.68358 -11.53890 -11.45764 -11.09298 -10.98530 -10.83743 -10.62785 -10.29701 -10.21324 -10.00018 -9.87925 -9.65132 -9.23422 -8.99500 -8.47267 -7.78724 -6.10976 -4.15768 0.56447 0.97750 1.60133 3.07533 3.26328 3.33754 3.37159 3.54240 3.78822 4.29335 4.39103 4.58343 4.69242 4.74886 4.93652 4.97856 5.04355 5.20110 5.24610 5.45491 5.54790 5.60714 5.69489 5.75889 5.88136 6.00541 6.05161 6.07808 6.20420 6.26914 6.43143 6.60339 6.99085 7.32759 7.41769 7.52428 7.84596 8.15311 8.21304 8.73765 8.91471 9.49298 10.96909 Molecular weight = 296.10amu Principal moments of inertia in cm(-1) A = 0.016774 B = 0.004584 C = 0.003934 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1668.826415 B = 6106.880266 C = 7116.613340 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.119 4.119 3 C -0.147 4.147 4 C 0.102 3.898 5 N -0.582 5.582 6 C 0.235 3.765 7 C -0.531 4.531 8 H 0.057 0.943 9 C 0.064 3.936 10 N -0.893 5.893 11 Si 0.897 3.103 12 H -0.280 1.280 13 H -0.285 1.285 14 H -0.274 1.274 15 C 0.551 3.449 16 O -0.528 6.528 17 C -0.161 4.161 18 C -0.051 4.051 19 C -0.162 4.162 20 C 0.182 3.818 21 Cl -0.035 7.035 22 N -0.481 5.481 23 C 0.167 3.833 24 H 0.047 0.953 25 H 0.078 0.922 26 H 0.058 0.942 27 H 0.069 0.931 28 H 0.052 0.948 29 H 0.057 0.943 30 H 0.060 0.940 31 H 0.085 0.915 32 H 0.072 0.928 33 H 0.052 0.948 34 H 0.046 0.954 35 H 0.264 0.736 36 H 0.163 0.837 37 H 0.149 0.851 38 H 0.175 0.825 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 12.464 10.611 -7.567 18.034 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.138 4.138 3 C -0.205 4.205 4 C -0.022 4.022 5 N -0.312 5.312 6 C 0.117 3.883 7 C -0.569 4.569 8 H 0.075 0.925 9 C -0.139 4.139 10 N -0.531 5.531 11 Si 0.724 3.276 12 H -0.206 1.206 13 H -0.210 1.210 14 H -0.199 1.199 15 C 0.336 3.664 16 O -0.405 6.405 17 C -0.166 4.166 18 C -0.076 4.076 19 C -0.182 4.182 20 C 0.017 3.983 21 Cl -0.007 7.007 22 N -0.191 5.191 23 C 0.009 3.991 24 H 0.066 0.934 25 H 0.096 0.904 26 H 0.077 0.923 27 H 0.088 0.912 28 H 0.072 0.928 29 H 0.076 0.924 30 H 0.079 0.921 31 H 0.104 0.896 32 H 0.090 0.910 33 H 0.070 0.930 34 H 0.064 0.936 35 H 0.074 0.926 36 H 0.180 0.820 37 H 0.167 0.833 38 H 0.192 0.808 Dipole moment (debyes) X Y Z Total from point charges 12.889 9.446 -7.365 17.595 hybrid contribution -0.525 0.370 0.786 1.015 sum 12.364 9.816 -6.579 17.103 Atomic orbital electron populations 1.22071 0.93965 1.03830 1.01256 1.21700 0.97839 0.95917 0.98364 1.21837 1.00534 0.95822 1.02311 1.21851 0.99893 0.82099 0.98377 1.48155 1.15503 1.05712 1.61800 1.19650 0.76221 0.96907 0.95546 1.21422 0.96285 1.45038 0.94198 0.92456 1.24903 0.95340 0.95219 0.98412 1.69914 1.00704 1.46436 1.36094 0.86516 0.77986 0.78153 0.84902 1.20621 1.21041 1.19865 1.17868 0.83767 0.85979 0.78824 1.90796 1.79562 1.17934 1.52236 1.21438 0.96965 0.96583 1.01631 1.22427 0.97223 0.94456 0.93543 1.21757 0.91751 1.01686 1.03045 1.21831 0.87200 0.92544 0.96677 1.98401 1.17187 1.90982 1.94111 1.67072 1.23242 1.14968 1.13823 1.22847 0.84627 0.98049 0.93539 0.93427 0.90377 0.92259 0.91242 0.92847 0.92427 0.92118 0.89640 0.91012 0.93028 0.93642 0.92631 0.81985 0.83346 0.80782 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.17 8.19 37.16 0.30 -1.87 16 2 C -0.12 -1.46 2.14 -90.62 -0.19 -1.66 16 3 C -0.15 -1.37 9.10 37.16 0.34 -1.03 16 4 C 0.10 1.53 4.43 -4.04 -0.02 1.51 16 5 N -0.58 -11.47 2.42 -176.20 -0.43 -11.89 16 6 C 0.23 5.72 4.43 -5.19 -0.02 5.70 16 7 C -0.53 -14.36 9.39 -34.44 -0.32 -14.68 16 8 H 0.06 1.56 7.81 -52.49 -0.41 1.15 16 9 C 0.06 1.75 5.46 -17.82 -0.10 1.66 16 10 N -0.89 -25.52 13.29 55.43 0.74 -24.79 16 11 Si 0.90 21.27 29.54 -169.99 -5.02 16.25 16 12 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 13 H -0.28 -6.73 7.11 56.52 0.40 -6.33 16 14 H -0.27 -6.50 7.11 56.52 0.40 -6.10 16 15 C 0.55 11.04 7.31 -12.36 -0.09 10.95 16 16 O -0.53 -12.80 16.54 5.31 0.09 -12.72 16 17 C -0.16 -2.53 5.15 -104.82 -0.54 -3.07 16 18 C -0.05 -0.62 7.52 -38.88 -0.29 -0.92 16 19 C -0.16 -1.74 9.86 -39.46 -0.39 -2.13 16 20 C 0.18 2.31 7.27 -17.34 -0.13 2.18 16 21 Cl -0.04 -0.38 29.10 -51.86 -1.51 -1.89 16 22 N -0.48 -7.10 10.32 -10.01 -0.10 -7.20 16 23 C 0.17 2.57 10.85 -17.13 -0.19 2.39 16 24 H 0.05 0.57 8.14 -51.93 -0.42 0.15 16 25 H 0.08 1.34 5.28 -51.93 -0.27 1.07 16 26 H 0.06 0.85 8.14 -51.93 -0.42 0.42 16 27 H 0.07 0.84 6.35 -51.93 -0.33 0.51 16 28 H 0.05 0.42 7.99 -51.93 -0.41 0.00 16 29 H 0.06 0.48 8.14 -51.93 -0.42 0.06 16 30 H 0.06 0.57 8.14 -51.93 -0.42 0.14 16 31 H 0.09 1.36 8.12 -51.93 -0.42 0.94 16 32 H 0.07 0.95 4.99 -51.93 -0.26 0.69 16 33 H 0.05 1.23 5.08 -51.93 -0.26 0.97 16 34 H 0.05 1.27 7.34 -51.93 -0.38 0.89 16 35 H 0.26 7.16 8.31 -40.82 -0.34 6.82 16 36 H 0.16 1.76 3.43 -52.49 -0.18 1.58 16 37 H 0.15 1.12 8.06 -52.48 -0.42 0.69 16 38 H 0.18 2.61 8.06 -52.49 -0.42 2.19 16 LS Contribution 326.99 15.07 4.93 4.93 Total: -1.00 -30.96 326.99 -7.55 -38.51 By element: Atomic # 1 Polarization: 4.38 SS G_CDS: -4.61 Total: -0.23 kcal Atomic # 6 Polarization: 0.67 SS G_CDS: -1.64 Total: -0.97 kcal Atomic # 7 Polarization: -44.09 SS G_CDS: 0.21 Total: -43.88 kcal Atomic # 8 Polarization: -12.80 SS G_CDS: 0.09 Total: -12.72 kcal Atomic # 14 Polarization: 21.27 SS G_CDS: -5.02 Total: 16.25 kcal Atomic # 17 Polarization: -0.38 SS G_CDS: -1.51 Total: -1.89 kcal Total LS contribution 4.93 Total: 4.93 kcal Total: -30.96 -7.55 -38.51 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000037979283.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.372 kcal (2) G-P(sol) polarization free energy of solvation -30.958 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.414 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.549 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.507 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.135 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds