Wall clock time and date at job start Tue Mar 31 2020 08:02:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 H 1.09001 * 109.47057 * 2 1 4 4 N 1.46492 * 109.47241 * 239.99786 * 2 1 3 5 5 C 1.34776 * 120.00059 * 85.00268 * 4 2 1 6 6 O 1.21288 * 119.99915 * 359.72310 * 5 4 2 7 7 C 1.50701 * 120.00292 * 180.02562 * 5 4 2 8 8 N 1.46494 * 109.47136 * 179.72284 * 7 5 4 9 9 C 1.46501 * 120.00189 * 90.00247 * 8 7 5 10 10 C 1.36937 * 120.00040 * 269.99824 * 8 7 5 11 11 H 1.08008 * 119.99950 * 142.06094 * 10 8 7 12 12 C 1.38816 * 120.00103 * 322.04870 * 10 8 7 13 13 N 1.31616 * 119.99466 * 157.00994 * 12 10 8 14 14 Si 1.86790 * 119.99805 * 337.01379 * 12 10 8 15 15 H 1.48501 * 109.47438 * 95.67958 * 14 12 10 16 16 H 1.48502 * 109.47132 * 215.67677 * 14 12 10 17 17 H 1.48499 * 109.47405 * 335.67703 * 14 12 10 18 18 C 1.50694 * 109.46583 * 119.99812 * 2 1 3 19 19 C 1.38248 * 119.98904 * 79.73317 * 18 2 1 20 20 C 1.38210 * 120.01604 * 179.72530 * 19 18 2 21 21 C 1.38355 * 119.98372 * 0.54150 * 20 19 18 22 22 Cl 1.73600 * 120.01360 * 179.71079 * 21 20 19 23 23 C 1.38357 * 119.97647 * 359.72805 * 21 20 19 24 24 C 1.38209 * 119.98515 * 359.97438 * 23 21 20 25 25 H 1.09003 * 109.47499 * 300.00175 * 1 2 3 26 26 H 1.09003 * 109.46981 * 60.00142 * 1 2 3 27 27 H 1.08999 * 109.47755 * 179.97438 * 1 2 3 28 28 H 0.96997 * 120.00019 * 265.00588 * 4 2 1 29 29 H 1.09005 * 109.47038 * 299.72480 * 7 5 4 30 30 H 1.09002 * 109.47149 * 59.72069 * 7 5 4 31 31 H 1.08995 * 109.47834 * 85.84607 * 9 8 7 32 32 H 1.08996 * 109.47362 * 205.85332 * 9 8 7 33 33 H 1.09003 * 109.46880 * 325.85112 * 9 8 7 34 34 H 0.97007 * 119.99595 * 180.02562 * 13 12 10 35 35 H 1.07997 * 119.98906 * 359.97438 * 19 18 2 36 36 H 1.07993 * 120.00860 * 180.27200 * 20 19 18 37 37 H 1.07994 * 120.00659 * 179.97438 * 23 21 20 38 38 H 1.07998 * 119.99824 * 180.02562 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 7 2.0183 -0.6906 -1.1961 5 6 2.1471 -0.0183 -2.3570 6 8 1.8539 1.1573 -2.4128 7 6 2.6489 -0.7288 -3.5877 8 7 2.6921 0.2109 -4.7106 9 6 3.9050 0.9919 -4.9661 10 6 1.5988 0.3593 -5.5217 11 1 1.3356 1.3361 -5.9000 12 6 0.8288 -0.7458 -5.8578 13 7 -0.4234 -0.5865 -6.2304 14 14 1.5699 -2.4587 -5.7811 15 1 1.2361 -3.0846 -4.4765 16 1 1.0176 -3.2868 -6.8831 17 1 3.0453 -2.3665 -5.9228 18 6 2.0322 -0.7104 1.2305 19 6 2.0613 -2.0920 1.2672 20 6 2.5270 -2.7441 2.3933 21 6 2.9538 -2.0138 3.4882 22 17 3.5320 -2.8322 4.9059 23 6 2.9193 -0.6312 3.4531 24 6 2.4591 0.0198 2.3241 25 1 -0.3634 0.5139 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3634 -1.0276 -0.0005 28 1 2.2490 -1.6318 -1.1525 29 1 3.6501 -1.1172 -3.4001 30 1 1.9787 -1.5537 -3.8297 31 1 4.5902 0.4084 -5.5810 32 1 3.6417 1.9117 -5.4882 33 1 4.3857 1.2367 -4.0189 34 1 -0.9616 -1.3587 -6.4650 35 1 1.7237 -2.6620 0.4142 36 1 2.5538 -3.8233 2.4202 37 1 3.2519 -0.0607 4.3076 38 1 2.4324 1.0991 2.2962 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068972565.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 08:02:37 Heat of formation + Delta-G solvation = 10.263808 kcal Electronic energy + Delta-G solvation = -21350.859918 eV Core-core repulsion = 18027.143137 eV Total energy + Delta-G solvation = -3323.716781 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 296.103 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -40.09644 -38.77822 -36.87655 -35.65716 -34.71294 -31.73779 -31.54493 -31.22119 -29.23801 -27.55637 -25.93997 -23.95154 -23.23743 -21.73418 -20.74439 -19.84522 -17.89018 -16.98131 -16.43780 -16.05694 -15.54402 -15.26894 -14.83669 -14.33732 -13.97443 -13.87847 -13.78423 -13.65773 -13.16472 -13.00777 -12.79168 -12.56717 -12.17362 -11.97020 -11.86887 -11.75781 -11.46250 -11.31676 -11.12320 -10.94749 -10.78828 -10.53511 -10.18526 -9.66860 -9.34407 -9.19002 -8.89590 -8.64749 -8.53774 -6.86233 -6.02140 -3.42384 0.82429 0.99390 1.83839 3.17992 3.27796 3.35283 3.42252 3.49318 3.65856 4.45518 4.45843 4.48642 4.58618 4.99856 5.02082 5.08623 5.24419 5.34538 5.37600 5.45475 5.62066 5.63915 5.78721 5.90615 5.93049 5.94578 6.01564 6.14100 6.28536 6.30684 6.37133 6.49725 6.64273 6.74831 6.88803 7.88072 8.06966 8.39044 8.85514 9.02752 9.66129 10.05177 11.13567 Molecular weight = 296.10amu Principal moments of inertia in cm(-1) A = 0.023846 B = 0.003454 C = 0.003349 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1173.919339 B = 8104.928879 C = 8357.632709 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C 0.181 3.819 3 H 0.095 0.905 4 N -0.743 5.743 5 C 0.488 3.512 6 O -0.517 6.517 7 C 0.118 3.882 8 N -0.586 5.586 9 C 0.130 3.870 10 C -0.260 4.260 11 H 0.080 0.920 12 C 0.032 3.968 13 N -0.894 5.894 14 Si 0.870 3.130 15 H -0.286 1.286 16 H -0.297 1.297 17 H -0.266 1.266 18 C -0.076 4.076 19 C -0.102 4.102 20 C -0.106 4.106 21 C -0.039 4.039 22 Cl -0.076 7.076 23 C -0.107 4.107 24 C -0.097 4.097 25 H 0.061 0.939 26 H 0.072 0.928 27 H 0.056 0.944 28 H 0.392 0.608 29 H 0.069 0.931 30 H 0.081 0.919 31 H 0.011 0.989 32 H 0.048 0.952 33 H 0.027 0.973 34 H 0.263 0.737 35 H 0.133 0.867 36 H 0.134 0.866 37 H 0.133 0.867 38 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.117 -4.913 20.525 22.273 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.217 4.217 2 C 0.076 3.924 3 H 0.113 0.887 4 N -0.400 5.400 5 C 0.273 3.727 6 O -0.390 6.390 7 C -0.013 4.013 8 N -0.307 5.307 9 C -0.015 4.015 10 C -0.389 4.389 11 H 0.097 0.903 12 C -0.168 4.168 13 N -0.535 5.535 14 Si 0.700 3.300 15 H -0.214 1.214 16 H -0.224 1.224 17 H -0.191 1.191 18 C -0.077 4.077 19 C -0.120 4.120 20 C -0.125 4.125 21 C -0.066 4.066 22 Cl -0.047 7.047 23 C -0.126 4.126 24 C -0.116 4.116 25 H 0.080 0.920 26 H 0.091 0.909 27 H 0.075 0.925 28 H 0.226 0.774 29 H 0.087 0.913 30 H 0.099 0.901 31 H 0.030 0.970 32 H 0.067 0.933 33 H 0.046 0.954 34 H 0.073 0.927 35 H 0.151 0.849 36 H 0.152 0.848 37 H 0.151 0.849 38 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 6.821 -4.122 20.436 21.935 hybrid contribution 0.286 -1.639 0.342 1.698 sum 7.107 -5.761 20.778 22.703 Atomic orbital electron populations 1.22173 0.94241 1.02388 1.02862 1.19706 0.94264 0.96796 0.81672 0.88738 1.46592 1.70000 1.13800 1.09594 1.22977 0.76989 0.88504 0.84239 1.90614 1.47833 1.16421 1.84096 1.21371 0.99719 0.94114 0.86046 1.43673 1.12775 1.47747 1.26515 1.21071 0.87809 0.95162 0.97490 1.18815 1.02097 0.94400 1.23600 0.90276 1.25491 0.95615 0.97815 0.97895 1.69907 1.05755 1.30490 1.47303 0.87026 0.80670 0.85889 0.76457 1.21420 1.22422 1.19066 1.20227 0.97648 0.93942 0.95853 1.20972 0.99189 0.93953 0.97924 1.21037 0.98982 1.00434 0.92021 1.20942 1.03278 0.92884 0.89477 1.98369 1.87468 1.79295 1.39579 1.21034 1.00230 0.92230 0.99110 1.21018 0.97971 1.00450 0.92149 0.92027 0.90879 0.92454 0.77396 0.91261 0.90148 0.97045 0.93282 0.95403 0.92679 0.84922 0.84833 0.84866 0.84740 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.15 9.46 37.16 0.35 -1.80 16 2 C 0.18 2.44 2.77 -69.09 -0.19 2.25 16 3 H 0.09 1.40 7.44 -51.93 -0.39 1.01 16 4 N -0.74 -11.40 5.03 -54.94 -0.28 -11.68 16 5 C 0.49 9.94 7.86 -10.99 -0.09 9.85 16 6 O -0.52 -12.54 16.10 5.55 0.09 -12.45 16 7 C 0.12 2.51 5.01 -5.20 -0.03 2.48 16 8 N -0.59 -14.39 1.96 -182.50 -0.36 -14.75 16 9 C 0.13 2.70 10.70 59.85 0.64 3.34 16 10 C -0.26 -7.48 9.88 -15.06 -0.15 -7.63 16 11 H 0.08 2.50 8.06 -52.48 -0.42 2.07 16 12 C 0.03 0.93 5.29 -17.43 -0.09 0.84 16 13 N -0.89 -27.33 13.97 55.49 0.78 -26.55 16 14 Si 0.87 21.17 25.10 -169.99 -4.27 16.90 16 15 H -0.29 -6.50 6.68 56.52 0.38 -6.12 16 16 H -0.30 -7.35 7.11 56.52 0.40 -6.95 16 17 H -0.27 -6.27 7.11 56.52 0.40 -5.87 16 18 C -0.08 -0.83 4.95 -104.62 -0.52 -1.34 16 19 C -0.10 -1.01 9.05 -39.59 -0.36 -1.37 16 20 C -0.11 -0.98 9.83 -39.55 -0.39 -1.37 16 21 C -0.04 -0.37 6.32 -39.49 -0.25 -0.62 16 22 Cl -0.08 -0.68 28.96 -51.86 -1.50 -2.18 16 23 C -0.11 -0.97 9.83 -39.55 -0.39 -1.36 16 24 C -0.10 -0.94 9.67 -39.59 -0.38 -1.32 16 25 H 0.06 0.70 8.14 -51.93 -0.42 0.28 16 26 H 0.07 1.23 8.14 -51.93 -0.42 0.81 16 27 H 0.06 0.73 8.14 -51.93 -0.42 0.31 16 28 H 0.39 4.96 6.88 -40.82 -0.28 4.68 16 29 H 0.07 1.22 8.07 -51.93 -0.42 0.80 16 30 H 0.08 1.80 3.38 -51.93 -0.18 1.62 16 31 H 0.01 0.22 8.14 -51.93 -0.42 -0.20 16 32 H 0.05 1.02 8.01 -51.93 -0.42 0.61 16 33 H 0.03 0.52 8.10 -51.93 -0.42 0.10 16 34 H 0.26 7.55 8.31 -40.82 -0.34 7.22 16 35 H 0.13 1.17 6.93 -52.49 -0.36 0.81 16 36 H 0.13 1.02 8.06 -52.49 -0.42 0.60 16 37 H 0.13 0.97 8.06 -52.49 -0.42 0.54 16 38 H 0.13 1.10 8.04 -52.49 -0.42 0.68 16 LS Contribution 334.54 15.07 5.04 5.04 Total: -1.00 -33.39 334.54 -7.34 -40.73 By element: Atomic # 1 Polarization: 8.00 SS G_CDS: -5.00 Total: 3.00 kcal Atomic # 6 Polarization: 3.78 SS G_CDS: -1.84 Total: 1.94 kcal Atomic # 7 Polarization: -53.12 SS G_CDS: 0.14 Total: -52.98 kcal Atomic # 8 Polarization: -12.54 SS G_CDS: 0.09 Total: -12.45 kcal Atomic # 14 Polarization: 21.17 SS G_CDS: -4.27 Total: 16.90 kcal Atomic # 17 Polarization: -0.68 SS G_CDS: -1.50 Total: -2.18 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -33.39 -7.34 -40.73 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068972565.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.997 kcal (2) G-P(sol) polarization free energy of solvation -33.395 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.602 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.338 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.733 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.264 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds