Wall clock time and date at job start Tue Mar 31 2020 08:18:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09009 * 109.46888 * 2 1 4 4 C 1.50703 * 109.47051 * 119.99176 * 2 1 3 5 5 O 1.21279 * 120.00200 * 120.00146 * 4 2 1 6 6 N 1.34774 * 119.99925 * 300.00369 * 4 2 1 7 7 C 1.46506 * 119.99977 * 179.97438 * 6 4 2 8 8 C 1.50697 * 109.46988 * 180.02562 * 7 6 4 9 9 C 1.38234 * 120.00493 * 105.00430 * 8 7 6 10 10 C 1.38228 * 120.01433 * 179.97438 * 9 8 7 11 11 C 1.38262 * 120.02341 * 0.04041 * 10 9 8 12 12 C 1.38193 * 120.01652 * 359.97438 * 11 10 9 13 13 C 1.38331 * 120.00858 * 284.72797 * 8 7 6 14 14 Cl 1.73600 * 120.01386 * 359.97438 * 13 8 7 15 15 N 1.46492 * 109.47477 * 239.99396 * 2 1 3 16 16 C 1.46493 * 120.00190 * 299.99772 * 15 2 1 17 17 C 1.36942 * 119.99843 * 120.00256 * 15 2 1 18 18 H 1.07996 * 120.00185 * 22.69010 * 17 15 2 19 19 C 1.38813 * 119.99560 * 202.69501 * 17 15 2 20 20 N 1.31615 * 120.00391 * 14.12563 * 19 17 15 21 21 Si 1.86802 * 119.99736 * 194.12324 * 19 17 15 22 22 H 1.48497 * 109.47263 * 0.02562 * 21 19 17 23 23 H 1.48499 * 109.47192 * 120.00076 * 21 19 17 24 24 H 1.48501 * 109.47184 * 240.00104 * 21 19 17 25 25 H 1.08997 * 109.47031 * 60.01165 * 1 2 3 26 26 H 1.08995 * 109.47741 * 300.00495 * 1 2 3 27 27 H 1.09009 * 109.46888 * 180.02562 * 1 2 3 28 28 H 0.97003 * 120.00378 * 0.02562 * 6 4 2 29 29 H 1.08995 * 109.46988 * 300.00349 * 7 6 4 30 30 H 1.08994 * 109.46751 * 60.00470 * 7 6 4 31 31 H 1.07994 * 119.99548 * 359.97438 * 9 8 7 32 32 H 1.07997 * 119.98690 * 180.02562 * 10 9 8 33 33 H 1.07999 * 119.98905 * 179.97438 * 11 10 9 34 34 H 1.07997 * 120.00539 * 180.02562 * 12 11 10 35 35 H 1.09006 * 109.47315 * 95.26336 * 16 15 2 36 36 H 1.08998 * 109.47567 * 215.25901 * 16 15 2 37 37 H 1.08998 * 109.47233 * 335.26086 * 16 15 2 38 38 H 0.97006 * 120.00215 * 179.97438 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0278 0.0000 4 6 2.0323 -0.7102 1.2306 5 8 2.7296 -1.6963 1.1195 6 7 1.7066 -0.2496 2.4546 7 6 2.1945 -0.9404 3.6509 8 6 1.6916 -0.2302 4.8812 9 6 0.6629 -0.7786 5.6241 10 6 0.2019 -0.1275 6.7529 11 6 0.7688 1.0729 7.1392 12 6 1.7970 1.6223 6.3972 13 6 2.2632 0.9678 5.2706 14 17 3.5605 1.6532 4.3427 15 7 2.0184 -0.6907 -1.1960 16 6 1.6646 -2.0932 -1.4277 17 6 2.8057 -0.0252 -2.0974 18 1 3.3650 0.8449 -1.7869 19 6 2.8849 -0.4691 -3.4103 20 7 2.0097 -1.3411 -3.8641 21 14 4.2335 0.1714 -4.5330 22 1 5.0826 1.1347 -3.7872 23 1 5.0682 -0.9639 -5.0016 24 1 3.6221 0.8521 -5.7027 25 1 -0.3633 0.5136 -0.8901 26 1 -0.3634 0.5139 0.8899 27 1 -0.3633 -1.0278 0.0005 28 1 1.1486 0.5388 2.5435 29 1 1.8308 -1.9679 3.6508 30 1 3.2844 -0.9407 3.6511 31 1 0.2193 -1.7159 5.3225 32 1 -0.6016 -0.5566 7.3332 33 1 0.4078 1.5813 8.0210 34 1 2.2400 2.5598 6.6994 35 1 0.7907 -2.1451 -2.0772 36 1 2.5012 -2.6053 -1.9030 37 1 1.4385 -2.5730 -0.4755 38 1 2.0648 -1.6510 -4.7816 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068972613.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 08:18:06 Heat of formation + Delta-G solvation = 7.394898 kcal Electronic energy + Delta-G solvation = -21418.342830 eV Core-core repulsion = 18094.501644 eV Total energy + Delta-G solvation = -3323.841186 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 296.103 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -39.93470 -38.91293 -36.58801 -35.53010 -34.51046 -32.23735 -31.33374 -30.94773 -29.04048 -26.26345 -25.82839 -23.90748 -23.02170 -21.99741 -21.18198 -19.32123 -17.43781 -16.86094 -16.30127 -16.03555 -15.68345 -15.27158 -14.72110 -14.42898 -14.12002 -13.80939 -13.54409 -13.47605 -12.99006 -12.73607 -12.46389 -12.23689 -11.78445 -11.72298 -11.65198 -11.58335 -11.24853 -10.89618 -10.77588 -10.72552 -10.52298 -10.26895 -9.96393 -9.80576 -9.41087 -9.07712 -8.86228 -8.63249 -8.44247 -6.69697 -5.65944 -3.11918 0.78973 0.90580 1.96136 3.20301 3.41416 3.42955 3.49914 3.52302 3.82340 4.36931 4.46234 4.55861 4.64310 4.92834 5.01926 5.24932 5.41274 5.45318 5.51370 5.53011 5.63084 5.84697 5.88236 6.00411 6.05037 6.07617 6.13822 6.29852 6.44655 6.59407 6.80690 6.88901 7.05162 7.59372 7.81993 7.90379 7.99396 8.44015 8.93700 9.29239 9.91089 10.39738 11.38137 Molecular weight = 296.10amu Principal moments of inertia in cm(-1) A = 0.026609 B = 0.003640 C = 0.003389 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1052.027014 B = 7689.757322 C = 8260.767038 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.160 3.840 3 H 0.088 0.912 4 C 0.494 3.506 5 O -0.525 6.525 6 N -0.735 5.735 7 C 0.158 3.842 8 C -0.092 4.092 9 C -0.091 4.091 10 C -0.118 4.118 11 C -0.106 4.106 12 C -0.114 4.114 13 C -0.025 4.025 14 Cl -0.056 7.056 15 N -0.572 5.572 16 C 0.170 3.830 17 C -0.256 4.256 18 H 0.067 0.933 19 C 0.005 3.995 20 N -0.902 5.902 21 Si 0.905 3.095 22 H -0.278 1.278 23 H -0.289 1.289 24 H -0.290 1.290 25 H 0.066 0.934 26 H 0.042 0.958 27 H 0.052 0.948 28 H 0.395 0.605 29 H 0.073 0.927 30 H 0.077 0.923 31 H 0.134 0.866 32 H 0.129 0.871 33 H 0.131 0.869 34 H 0.133 0.867 35 H 0.027 0.973 36 H 0.038 0.962 37 H 0.007 0.993 38 H 0.251 0.749 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.073 5.353 23.085 24.234 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C 0.046 3.954 3 H 0.105 0.895 4 C 0.280 3.720 5 O -0.399 6.399 6 N -0.391 5.391 7 C 0.034 3.966 8 C -0.093 4.093 9 C -0.109 4.109 10 C -0.136 4.136 11 C -0.125 4.125 12 C -0.132 4.132 13 C -0.052 4.052 14 Cl -0.027 7.027 15 N -0.292 5.292 16 C 0.025 3.975 17 C -0.386 4.386 18 H 0.085 0.915 19 C -0.194 4.194 20 N -0.547 5.547 21 Si 0.735 3.265 22 H -0.203 1.203 23 H -0.216 1.216 24 H -0.217 1.217 25 H 0.085 0.915 26 H 0.061 0.939 27 H 0.071 0.929 28 H 0.229 0.771 29 H 0.092 0.908 30 H 0.095 0.905 31 H 0.152 0.848 32 H 0.147 0.853 33 H 0.149 0.851 34 H 0.151 0.849 35 H 0.045 0.955 36 H 0.056 0.944 37 H 0.026 0.974 38 H 0.062 0.938 Dipole moment (debyes) X Y Z Total from point charges -4.409 4.562 22.660 23.531 hybrid contribution 0.586 0.711 -0.537 1.066 sum -3.823 5.273 22.123 23.062 Atomic orbital electron populations 1.22229 0.96354 1.01747 1.00947 1.20234 0.93352 0.96032 0.85771 0.89455 1.22791 0.79604 0.85127 0.84525 1.90631 1.36805 1.26138 1.86319 1.46331 1.55240 1.32599 1.04898 1.20084 0.99727 0.95467 0.81289 1.19935 0.97003 0.94390 0.97962 1.21136 0.95131 1.00148 0.94535 1.21266 1.00067 0.95436 0.96850 1.21153 0.95849 0.95880 0.99600 1.21088 0.97634 1.00442 0.94056 1.20966 0.93767 0.95345 0.95104 1.98417 1.47608 1.84014 1.72623 1.43644 1.57853 1.08456 1.19250 1.20720 0.99258 0.82858 0.94623 1.19236 1.19163 1.11089 0.89090 0.91480 1.24957 0.98377 0.99541 0.96499 1.70107 1.34578 1.34719 1.15289 0.86180 0.81662 0.78100 0.80548 1.20333 1.21590 1.21749 0.91460 0.93887 0.92925 0.77125 0.90838 0.90517 0.84800 0.85277 0.85137 0.84881 0.95494 0.94363 0.97414 0.93832 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.71 9.09 37.16 0.34 -2.37 16 2 C 0.16 3.34 3.12 -69.09 -0.22 3.12 16 3 H 0.09 1.75 7.86 -51.92 -0.41 1.34 16 4 C 0.49 9.78 6.85 -10.99 -0.08 9.70 16 5 O -0.53 -12.61 14.61 5.56 0.08 -12.52 16 6 N -0.74 -10.86 5.35 -61.47 -0.33 -11.19 16 7 C 0.16 2.10 5.14 -5.19 -0.03 2.07 16 8 C -0.09 -0.97 5.25 -104.59 -0.55 -1.52 16 9 C -0.09 -0.79 9.67 -39.59 -0.38 -1.17 16 10 C -0.12 -0.84 10.05 -39.58 -0.40 -1.24 16 11 C -0.11 -0.74 10.05 -39.59 -0.40 -1.14 16 12 C -0.11 -0.95 9.83 -39.55 -0.39 -1.34 16 13 C -0.02 -0.26 6.31 -39.49 -0.25 -0.51 16 14 Cl -0.06 -0.66 27.56 -51.86 -1.43 -2.09 16 15 N -0.57 -15.10 2.58 -174.82 -0.45 -15.56 16 16 C 0.17 4.56 7.47 59.84 0.45 5.01 16 17 C -0.26 -7.32 9.58 -15.06 -0.14 -7.46 16 18 H 0.07 1.87 7.83 -52.49 -0.41 1.45 16 19 C 0.00 0.14 5.08 -17.43 -0.09 0.05 16 20 N -0.90 -27.04 10.75 55.49 0.60 -26.44 16 21 Si 0.91 22.54 29.58 -169.99 -5.03 17.52 16 22 H -0.28 -6.77 7.11 56.52 0.40 -6.37 16 23 H -0.29 -7.28 7.11 56.52 0.40 -6.88 16 24 H -0.29 -7.17 7.11 56.52 0.40 -6.77 16 25 H 0.07 1.27 8.14 -51.93 -0.42 0.84 16 26 H 0.04 0.59 7.56 -51.93 -0.39 0.19 16 27 H 0.05 0.97 7.67 -51.92 -0.40 0.57 16 28 H 0.40 5.00 7.88 -40.82 -0.32 4.68 16 29 H 0.07 0.98 7.95 -51.93 -0.41 0.57 16 30 H 0.08 1.14 7.57 -51.93 -0.39 0.74 16 31 H 0.13 1.00 8.00 -52.49 -0.42 0.58 16 32 H 0.13 0.63 8.06 -52.49 -0.42 0.20 16 33 H 0.13 0.59 8.06 -52.49 -0.42 0.16 16 34 H 0.13 0.91 8.06 -52.49 -0.42 0.49 16 35 H 0.03 0.75 7.34 -51.93 -0.38 0.37 16 36 H 0.04 1.12 7.36 -51.93 -0.38 0.74 16 37 H 0.01 0.19 6.44 -51.93 -0.33 -0.15 16 38 H 0.25 7.26 8.31 -40.82 -0.34 6.92 16 LS Contribution 333.34 15.07 5.02 5.02 Total: -1.00 -33.63 333.34 -8.75 -42.37 By element: Atomic # 1 Polarization: 4.77 SS G_CDS: -5.08 Total: -0.31 kcal Atomic # 6 Polarization: 5.33 SS G_CDS: -2.13 Total: 3.20 kcal Atomic # 7 Polarization: -53.01 SS G_CDS: -0.18 Total: -53.19 kcal Atomic # 8 Polarization: -12.61 SS G_CDS: 0.08 Total: -12.52 kcal Atomic # 14 Polarization: 22.54 SS G_CDS: -5.03 Total: 17.52 kcal Atomic # 17 Polarization: -0.66 SS G_CDS: -1.43 Total: -2.09 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -33.63 -8.75 -42.37 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068972613.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.769 kcal (2) G-P(sol) polarization free energy of solvation -33.625 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.144 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.749 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.374 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.395 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds